Research Highlights


Studies under way in VA to advance genomic medicine

April 20, 2008

A review article published in the March 19 Journal of the American Medical Association (JAMA) by researchers from VA and the RAND Corporation has focused attention on the burgeoning movement to incorporate genomics—the use of patients' individual genetic profiles to customize care—into everyday medical practice. VA has a rich array of research projects relating to genomic medicine and expects to be in the forefront of its widening implementation.

Technicians Weleetka Carter and Angie Stone operate a machine that reads DNA chips

It's in the genes—(From foreground) Technicians Weleetka Carter and Angie Stone operate a machine that reads DNA chips in the Pharmacogenomics Analysis Lab at the Little Rock VA. (Photo by Jeffrey Bowen)

The authors of the JAMA article, who synthesized findings from 68 studies, found that on the whole, health professionals and the public in the U.S. and other developed countries are unprepared to make effective use of genomics to prevent, diagnose or treat common chronic illnesses such as diabetes or heart disease.

"Primary care clinicians are on the front lines of patient care and they are going to need to be prepared to incorporate genetics into their practices," said lead author Maren Scheuner, MD, MPH, of RAND. "Training and educating the health care workforce about the role of genetics in their clinical practice and increasing the size of the genetics specialty workforce are potential solutions to the barriers we identified."

The study was funded by VA to inform its agenda for research on genomic medicine and to help guide the implementation of genomic medicine in its health system. The everyday use of genomic medicine in VA nowadays is still limited in scope, as in U.S. health care in general, but the agency has launched an ambitious research agenda to iron out the ethical, logistical and scientific issues that need to be resolved before the field can expand.

Current policy at VA hospitals and clinics is to provide whatever genetic tests are clinically necessary and appropriate.

"In applying that policy on the clinical side, it means that we normally don’t do any tests that are not related to the diagnosis or treatment of patients," says Michael Brophy, MS, MT (ASCP), associate chief consultant for VA’s Diagnostic Services office. “While the individual provider makes the decision on what tests to order, those that provide little if any diagnostic value are generally not ordered in VA."

An example of a genetic test that would be provided is the test to confirm the diagnosis of hemochromatosis, a hereditary condition in which iron builds up in the body. Another example is ApoE genotyping, used to predict a patient’s response to cholesterol-lowering statin drugs or to help diagnose Alzheimer’s disease. VA doctors also commonly use genetic tests to help diagnose breast, colon and other cancers.

Tests whose clinical value is debatable are less likely to be offered in VA, says Brophy. For example, about five percent of patients carry a gene that makes them very sensitive to the blood thinner warfarin, sold as Coumadin. But offering the test appears to have little impact on patient care and outcomes. Brophy: "Most of the clinicians just didn’t feel it was going to make much practical difference when looked at from the perspective of real clinical outcomes. Because if you start patients on a low dose as you’re supposed to, and then adjust their therapy upward, the genetic predisposition, when considered along with the other variables, is generally not as relevant. It’s only one of many factors that determine the appropriate dose."

Next decade may bring dramatic progress

Ron Przygodzki, MD, associate director for genomic medicine with VA’s Office of Research and Development, agrees that the test for warfarin "is a good step forward in the right direction" but not yet a magic bullet for physicians.

Similarly, he points out that much of the predictive DNA testing purchased by veterans and other consumers through various Internet sites offers little practical benefit. He says most of the tests come back with results indicating only a slightly elevated risk for this or that medical condition, based on a combination of single nucleotide polymorphisms—genetic variations—that may or may not be clinically significant. The information is thus unlikely to affect decisions by patients or their doctors.

"The only thing your physician could tell you, for example, is that you may be susceptible to diabetes, or obesity," says Przygodzki. "There are no bona fide studies to get a real answer on what this really means. Most diseases involve a lot of medical and lifestyle factors. We can’t put a finger on one thing."

However, he expects the situation to change dramatically over the next decade as researchers in VA and elsewhere continue to refine and expand genetic testing and study how to best use the results to improve care. A case in point: Katherine Meyer-Siegler, PhD, a research chemist at the Bay Pines (Fla.) VA Medical Center, recently found that genetic variations associated with a protein called macrophage migration inhibitory factor may signal an increased risk for prostate cancer recurrence. Findings such as these could eventually make an important difference for patients and doctors deciding on a treatment approach.

Survey of veterans to help guide efforts

Aside from biomedical advances, laying the groundwork for the expansion of genomic medicine involves thorny ethical issues. For example, how are DNA samples stored and for how long? How is the information "de-identified," and who has access to it? DNA samples collected as part of VA research studies are handled according to strict and clearly defined rules. But if DNA testing becomes a much bigger part of routine clinical care, VA will need additional policies governing its use.

Tackling such issues is one of the jobs of VA’s 13-member Genomic Medicine Advisory Committee, which includes genetics experts and representatives from veterans’ groups. The group was formed in 2006 to advise VA on scientific and ethical issues related to the establishment, development and operation of a genomic medicine program.

Additional guidance is expected from an Internet-based survey of about 900 veterans now being conducted for VA by the Genetics and Public Policy Center (GPPC) at Johns Hopkins University. The survey was designed based on results from focus groups held with veterans nationwide over the past year. GPPC recently conducted a similar survey of the general public for the National Human Genome Research Institute.

Sumitra Muralidhar, PhD, a scientific program manager with VA's Office of Research and Development, says the survey should provide important answers to help guide VA’s eventual implementation of genomic medicine.

According to Muralidhar, "The survey questions generally relate to what aspects of the genomic medicine program veterans are optimistic about, what they are concerned about, and what their expectations are—for example, whether they think the program will benefit their healthcare, whether they would expect compensation for participation, what types of research their genetic information should be used for, who should have access to their samples and data, and what their expectations are with regard to privacy and security of their genetic information."

Adding genetic data into the electronic health record

Przygodzki notes that VA researchers are also working with outside experts to examine issues such as how to merge genetic information into VA’s innovative electronic health record, which serves as an invaluable tool for VA clinicians and researchers.

As reflected in the VA-RAND study in JAMA, adding genetic information to health records is just one of many infrastructure issues that will need to be resolved before genomics can be used more widely in VA. "The technology is coming around," says Przygodzki, "but we need to create the structures for educating patients, physicians, and caregivers. We also need to make sure that we put the information into the medical file so clinicians and researchers can use it appropriately and effectively."

First and foremost, he says, "We have to protect the veterans we care for and handle their genetic information in a way that’s safe and beneficial for them."

This article originally appeared in the April-May 2008 issue of VA Research Currents.