|
|
|
About the Helix Systems Mirror Fragments
|
|
|---|
|
This site contains the reference sequence for a handful of genomes from the
UCSC Genome Browser: human, rhesus monkey, mouse, rat, guinea pig, dog, cow, chicken, Drosophila, and zebrafish genomes.
We encourage you to explore these sequences with our tools.
The
Genome Browser
zooms and scrolls over chromosomes, showing the work of annotators worldwide.
The Gene Sorter
shows expression, homology and other information on groups of genes that can
be related in many ways.
Blat
quickly maps your sequence to the genome.
The
Table Browser
provides convenient access to the underlying database.
Genome Graphs
allows you to upload and display genome-wide data sets.
The UCSC Genome Browser is developed and maintained by the Genome
Bioinformatics Group, a cross-departmental team within the Center for
Biomolecular Science and Engineering (CBSE) at the University of California Santa Cruz
(UCSC).
If you have feedback or questions concerning the tools or
data on this website, feel free to contact us on our
public mailing list. To view
the results of the Genome Browser users' survey we
conducted in May 2007, click here.
|
|
|
|
|
|
News |
|
|
|
|---|
|
To receive announcements of new genome
assembly releases, new software features, updates and
training seminars by email, subscribe to the
genome-announce mailing list.
10 August 2009 - Updated Yeast Genome Browser Released
We have added the June 2008 release of the yeast genome
(Saccharomyces cerevisiae) based on sequence from
the Saccharomyces Genome Database (SGD).
The sequence, open reading frame (ORF), and gene annotations
were downloaded from the site
ftp://genome-ftp.stanford.edu/pub/yeast/data_download.
The S288C strain was used in this sequencing project. Reference
information for each chromosome may be found in the SGD
Systematic Sequencing Table.
Bulk downloads of the sequence and annotation data are
available via the Genome Browser
FTP server
or the Downloads
page.
See the Credits
page for details on contributions to this release.
22 July 2009 - Updated Opossum Genome Browser Released
We have released an updated opossum (Monodelphis domestica)
genome browser, UCSC version monDom5, corresponding to the
Broad Institute's October 2006 assembly.
Read more.
7 July 2009 - Engineering Job Opening with UCSC Genome Browser Project
The UCSC Center for Biomolecular Science and Engineering is
currently accepting applications for a full-time,
experienced engineer
Read more.
|
|
|
|
|
|
|---|
|
The sequence and annotation data displayed in the Genome Browser
are freely available for any use
with the following conditions:
- Genome sequence data use restrictions are noted within the
species sections on the Credits
page.
- Some annotation tracks contributed by external collaborators
contain proprietary data that have specific use restrictions. To
check for restrictions associated with a particular genome assembly,
review the database/README.txt file in the assembly's
downloads directory.
The Genome Browser and Blat software are free for academic,
nonprofit, and personal use. A license is required for commercial use.
See the Licenses page for more information.
Program-driven use of this software is limited to a maximum of one
hit every 15 seconds and no more than 5,000 hits per day.
For assistance with questions or problems regarding the UCSC Genome
Browser software, database, genome assemblies, or release cycles,
see the FAQ.
|
|
|
|
|
Technical Information About the Assembled Sequence
|
|
|
|
|
