Entrez
Nucleotides - search nucleotide sequence records
GenBank -
a database of nucleotide sequences from >130,000 organisms
RefSeq -
NCBI database of Reference Sequence
Third
Party Annotation (TPA) database a database of re-annotations/re-assemblies
of sequences already present in DDBJ/EMBL/GenBank
dbEST -database
of expressed sequence tags
dbGSS -database
of genome survey sequences
dbSNP -
database of single nucleotide polymorphisms
dbSTS -
database of sequence tagged sites
UniSTS -
a unified, non-redundant view of sequence tagged sites (STSs).
UniGene -
ESTs and full-length mRNA sequences organized into clusters that each
represent a unique known or putative gene
HomoloGene -
a gene homology tool that compares nucleotide sequences between pairs
of organisms in order to identify putative orthologs
Mammalian Gene Collection
(MGC) seeks to identify and sequence a representative full open
reading frame (FL-ORF) clone for each human, mouse, and rat gene.
Trace
Archive - a repository of the raw sequence traces generated by
large sequencing projects
UniVec -
a database that can be used to quickly identify segments within nucleic
acid sequences which may be of vector origin.
DNA Data Bank of
Japan (DDBJ DDBJ is the sole DNA data bank in Japan , which is
officially certified to collect DNA sequences from researchers and
to issue the internationally recognized accession number to data submitters
EMBL
Nucleotide Database - Europe's primary collection of nucleotide
sequences is maintained in collaboration with Genbank (
USA ) and DDBJ (
Japan )
Ensembl - Providing
up to date completed metazoic genomes and the best possible automatic
annotation.
ASD – The
Alternative Splicing Database (ASD) contains data on alternatively spliced
exons along with value-added annotation.
EMBL-Align
database -EMBL-Align multiple sequence alignment database.
EMBL-Bank -
The EMBL-Bank also known as the EMBL Nucleotide Sequence Database constitutes
Europe 's primary nucleotide sequence resource.
Genomes Server -
An overview of completed genomes at the EBI.
IMGT/HLA -
Immunogenetics database, compromising IMGT/HLA database of the human
MHC complex.
IMGT/LIGM - Immunogenetics
database, compromising IMGT/LIGM database of immunoglobulins and T-cell
receptors.
IPD - The Immuno
Polymorphism Database (IPD), includes polymorphic genes of the immune
system, like KIR, HPA and the non-human MHC.
Mutations - Sequence
variation database project.
Parasites -
Parasite Genome databases.
CGAP -
Cancer Genome Anatomy Project - interdisciplinary program to identify
the human genes expressed in different cancerous states, based on cDNA
(EST) libraries, and to determine the molecular profiles of normal, precancerous,
and malignant cells.
|