| | This journal provides immediate access to some articles. Biochemical Processes and Macromolecular Structures Structure and Expression of Phosphoenolpyruvate Carboxylase Kinase Genes in Solanaceae. A Novel Gene Exhibits Alternative Splicing Justin T. Marsh, Stuart Sullivan, James Hartwell, and Hugh G. Nimmo PMCID: PMC300753 Lipid Storage Metabolism Is Limited by the Prevailing Low Oxygen Concentrations within Developing Seeds of Oilseed Rape Helene Vigeolas, Joost T. van Dongen, Peter Waldeck, Daniela Hühn, and Peter Geigenberger PMCID: PMC300756 Bioenergetics and Photosynthesis Decreased Content of Leaf Ferredoxin Changes Electron Distribution and Limits Photosynthesis in Transgenic Potato Plants Simone Holtgrefe, Klaus P. Bader, Peter Horton, Renate Scheibe, Antje von Schaewen, and Jan E. Backhausen PMCID: PMC300731 Rubisco Activase Is Required for Optimal Photosynthesis in the Green Alga Chlamydomonas reinhardtii in a Low-CO2 Atmosphere Steve V. Pollock, Sergio L. Colombo, Davey L. Prout, Jr., Ashley C. Godfrey, and James V. Moroney PMCID: PMC300738 Identification of AtNDI1, an Internal Non-Phosphorylating NAD(P)H Dehydrogenase in Arabidopsis Mitochondria Catherine S. Moore, Rebecca J. Cook-Johnson, Charlotta Rudhe, James Whelan, David A. Day, Joseph T. Wiskich, and Kathleen L. Soole PMCID: PMC300748 Light Control of Nuclear Gene mRNA Abundance and Translation in Tobacco Li Tang, Sumana Bhat, and Marie E. Petracek PMCID: PMC300749 Photosynthesis and State Transitions in Mitochondrial Mutants of Chlamydomonas reinhardtii Affected in Respiration Pierre Cardol, Geoffrey Gloire, Michel Havaux, Claire Remacle, René Matagne, and Fabrice Franck PMCID: PMC300752 Isolated Durum Wheat and Potato Cell Mitochondria Oxidize Externally Added NADH Mostly via the Malate/Oxaloacetate Shuttle with a Rate That Depends on the Carrier-Mediated Transport Donato Pastore, Sergio Di Pede, and Salvatore Passarella PMCID: PMC300754 Inorganic Carbon Limitation Induces Transcripts Encoding Components of the CO2-Concentrating Mechanism in Synechococcus sp. PCC7942 through a Redox-Independent Pathway Fiona J. Woodger, Murray R. Badger, and G. Dean Price PMCID: PMC300758 Phosphorylated Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase from Heterotrophic Cells of Wheat Interacts with 14-3-3 Proteins Diego M. Bustos and Alberto A. Iglesias PMCID: PMC300759 Cell Biology and Signal Transduction Expression of Arabidopsis γ-Tubulin in Fission Yeast Reveals Conserved and Novel Functions of γ-Tubulin Tetsuya Horio and Berl R. Oakley PMCID: PMC300744 Import of the Peroxisomal Targeting Signal Type 2 Protein 3-Ketoacyl-Coenzyme A Thiolase into Glyoxysomes Tanya L. Johnson and Laura J. Olsen PMCID: PMC300750 Auxin Responsiveness of a Novel Cytochrome P450 in Rice Coleoptiles Christina Chaban, Frank Waller, Masaki Furuya, and Peter Nick PMCID: PMC300751 Development and Hormone Action Possible Involvement of Leaf Gibberellins in the Clock-Controlled Expression of XSP30, a Gene Encoding a Xylem Sap Lectin, in Cucumber Roots Atsushi Oda, Chiyoko Sakuta, Susumu Masuda, Tsuyoshi Mizoguchi, Hiroshi Kamada, and Shinobu Satoh PMCID: PMC300732 An Arabidopsis pex10 Null Mutant Is Embryo Lethal, Implicating Peroxisomes in an Essential Role during Plant Embryogenesis Imogen A. Sparkes, Federica Brandizzi, Stephen P. Slocombe, Mahmoud El-Shami, Chris Hawes, and Alison Baker PMCID: PMC300734 Impaired Induction of the Jasmonate Pathway in the Rice Mutant hebiba Michael Riemann, Axel Müller, Arthur Korte, Masaki Furuya, Elmar W. Weiler, and Peter Nick PMCID: PMC300735 Brassinolide Induces IAA5, IAA19, and DR5, a Synthetic Auxin Response Element in Arabidopsis, Implying a Cross Talk Point of Brassinosteroid and Auxin Signaling Ayako Nakamura, Kanako Higuchi, Hideki Goda, Makoto T. Fujiwara, Shinichiro Sawa, Tomokazu Koshiba, Yukihisa Shimada, and Shigeo Yoshida PMCID: PMC300737 The Arabidopsis Locus RCB Mediates Upstream Regulation of Mitotic Gene Expression Kristiina Himanen, Christophe Reuzeau, Tom Beeckman, Siegbert Melzer, Olivier Grandjean, Liz Corben, and Dirk Inzé PMCID: PMC300739 Diphtheria Toxin-Mediated Cell Ablation Reveals Interregional Communication during Arabidopsis Seed Development Dolf Weijers, Jan-Piet van Hamburg, Erwin van Rijn, Paul J.J. Hooykaas, and Remko Offringa PMCID: PMC300741 Editorial: State of the Field Light Signaling E. P. Spalding PMCID: PMC1540341 Environmental Stress and Adaptation Monitoring Expression Profiles of Rice Genes under Cold, Drought, and High-Salinity Stresses and Abscisic Acid Application Using cDNA Microarray and RNA Gel-Blot Analyses M. Ashiq Rabbani, Kyonoshin Maruyama, Hiroshi Abe, M. Ayub Khan, Koji Katsura, Yusuke Ito, Kyoko Yoshiwara, Motoaki Seki, Kazuo Shinozaki, and Kazuko Yamaguchi-Shinozaki PMCID: PMC300730 Effect of Manganese Toxicity on the Proteome of the Leaf Apoplast in Cowpea Marion M. Fecht-Christoffers, Hans-Peter Braun, Christelle Lemaitre-Guillier, Alain VanDorsselaer, and Walter J. Horst PMCID: PMC300745 How Do Plants Achieve Tolerance to Phosphorus Deficiency? Small Causes with Big Effects Matthias Wissuwa PMCID: PMC300746 Focus Issue on Light Signaling Research Articles Distinct Ultraviolet-Signaling Pathways in Bean Leaves. DNA Damage Is Associated with β-1,3-Glucanase Gene Induction, But Not with Flavonoid Formation Birgit Kucera, Gerhard Leubner-Metzger, and Eckard Wellmann PMCID: PMC300701 Blue-Light- and Phosphorylation-Dependent Binding of a 14-3-3 Protein to Phototropins in Stomatal Guard Cells of Broad Bean Toshinori Kinoshita, Takashi Emi, Misumi Tominaga, Koji Sakamoto, Ayako Shigenaga, Michio Doi, and Ken-ichiro Shimazaki PMCID: PMC300702 Primary Inhibition of Hypocotyl Growth and Phototropism Depend Differently on Phototropin-Mediated Increases in Cytoplasmic Calcium Induced by Blue Light Kevin M. Folta, Erin J. Lieg, Tessa Durham, and Edgar P. Spalding PMCID: PMC300703 Phytochrome Modulation of Blue Light-Induced Chloroplast Movements in Arabidopsis Stacy L. DeBlasio, Jack L. Mullen, Darron R. Luesse, and Roger P. Hangarter PMCID: PMC300704 A Genome-Wide Analysis of Blue-Light Regulation of Arabidopsis Transcription Factor Gene Expression during Seedling Development Yuling Jiao, Hongjuan Yang, Ligeng Ma, Ning Sun, Haiyuan Yu, Tie Liu, Ying Gao, Hongya Gu, Zhangliang Chen, Masamitsu Wada, Mark Gerstein, Hongyu Zhao, Li-Jia Qu, and Xing Wang Deng PMCID: PMC300705 Functional Analysis and Intracellular Localization of Rice Cryptochromes Nanako Matsumoto, Tomoharu Hirano, Toshisuke Iwasaki, and Naoki Yamamoto PMCID: PMC300706 The Role of Cryptochrome 2 in Flowering in Arabidopsis Salah El-Din El-Assal, Carlos Alonso-Blanco, Anton J.M. Peeters, Cornelis Wagemaker, James L. Weller, and Maarten Koornneef PMCID: PMC300707 Photoactivated Adenylyl Cyclase Controls Phototaxis in the Flagellate Euglena gracilis Maria Ntefidou, Mineo Iseki, Masakatsu Watanabe, Michael Lebert, and Donat-Peter Häder PMCID: PMC300708 Blue Light and Phytochrome-Mediated Stomatal Opening in the npq1 and phot1 phot2 Mutants of Arabidopsis Lawrence D. Talbott, Irene J. Shmayevich, Yooshun Chung, Jamila W. Hammad, and Eduardo Zeiger PMCID: PMC300709 EARLY FLOWERING 4 Functions in Phytochrome B-Regulated Seedling De-Etiolation Rajnish Khanna, Elise A. Kikis, and Peter H. Quail PMCID: PMC300710 Increased Phytochrome B Alleviates Density Effects on Tuber Yield of Field Potato Crops Hernán E. Boccalandro, Edmundo L. Ploschuk, Marcelo J. Yanovsky, Rodolfo A. Sánchez, Christiane Gatz, and Jorge J. Casal PMCID: PMC300711 The Cape Verde Islands Allele of Cryptochrome 2 Enhances Cotyledon Unfolding in the Absence of Blue Light in Arabidopsis Javier F. Botto, Carlos Alonso-Blanco, Ignacio Garzarón, Rodolfo A. Sánchez, and Jorge J. Casal PMCID: PMC300712 Characterization of a Novel Non-Constitutive Photomorphogenic cop1 Allele Monika Dieterle, Claudia Büche, Eberhard Schäfer, and Thomas Kretsch PMCID: PMC300713 HY5, Circadian Clock-Associated 1, and a cis-Element, DET1 Dark Response Element, Mediate DET1 Regulation of Chlorophyll a/b-Binding Protein 2 Expression Bridey B. Maxwell, Carol R. Andersson, Daniel S. Poole, Steve A. Kay, and Joanne Chory PMCID: PMC300714 Photomorphogenic Responses in Maize Seedling Development Nicole H. Markelz, Denise E. Costich, and Thomas P. Brutnell PMCID: PMC300715 LAF3, a Novel Factor Required for Normal Phytochrome A Signaling Peter D. Hare, Simon G. Møller, Li-Fang Huang, and Nam-Hai Chua PMCID: PMC300716 Identification of Promoter Motifs Involved in the Network of Phytochrome A-Regulated Gene Expression by Combined Analysis of Genomic Sequence and Microarray Data Matthew E. Hudson and Peter H. Quail PMCID: PMC300717 A Genomic Analysis of the Shade Avoidance Response in Arabidopsis Paul Francis Devlin, Marcelo Javier Yanovsky, and Steve A. Kay PMCID: PMC300718 Overexpression of a Mutant Basic Helix-Loop-Helix Protein HFR1, HFR1-ΔN105, Activates a Branch Pathway of Light Signaling in Arabidopsis Ki-Young Yang, Young-Mi Kim, Seunghee Lee, Pill-Soon Song, and Moon-Soo Soh PMCID: PMC300719 CYP72B1 Inactivates Brassinosteroid Hormones: An Intersection between Photomorphogenesis and Plant Steroid Signal Transduction Edward M. Turk, Shozo Fujioka, Hideharu Seto, Yukihisa Shimada, Suguru Takatsuto, Shigeo Yoshida, Megan A. Denzel, Quetzal I. Torres, and Michael M. Neff PMCID: PMC300720 Genetics, Genomics, and Molecular Evolution Conserved Subgroups and Developmental Regulation in the Monocot rop Gene Family Todd M. Christensen, Zuzana Vejlupkova, Yogesh K. Sharma, Kirstin M. Arthur, Joseph W. Spatafora, Carol A. Albright, Robert B. Meeley, Jon P. Duvick, Ralph S. Quatrano, and John E. Fowler PMCID: PMC300733 Activation of Anthocyanin Biosynthesis in Gerbera hybrida (Asteraceae) Suggests Conserved Protein-Protein and Protein-Promoter Interactions between the Anciently Diverged Monocots and Eudicots Paula Elomaa, Anne Uimari, Merja Mehto, Victor A. Albert, Roosa A.E. Laitinen, and Teemu H. Teeri PMCID: PMC300736 Overexpression of SOD2 Increases Salt Tolerance of Arabidopsis Xiuhua Gao, Zhonghai Ren, Yanxiu Zhao, and Hui Zhang PMCID: PMC300740 The Fasciclin-Like Arabinogalactan Proteins of Arabidopsis. A Multigene Family of Putative Cell Adhesion Molecules Kim L. Johnson, Brian J. Jones, Antony Bacic, and Carolyn J. Schultz PMCID: PMC300743 Generation and Analysis of End Sequence Database for T-DNA Tagging Lines in Rice Suyoung An, Sunhee Park, Dong-Hoon Jeong, Dong-Yeon Lee, Hong-Gyu Kang, Jung-Hwa Yu, Junghe Hur, Sung-Ryul Kim, Young-Hea Kim, Miok Lee, Soonki Han, Soo-Jin Kim, Jungwon Yang, Eunjoo Kim, Soo Jin Wi, Hoo Sun Chung, Jong-Pil Hong, Vitnary Choe, Hak-Kyung Lee, Jung-Hee Choi, Jongmin Nam, Seong-Ryong Kim, Phun-Bum Park, Ky Young Park, Woo Taek Kim, Sunghwa Choe, Chin-Bum Lee, and Gynheung An PMCID: PMC300755 T-DNA Integration in Arabidopsis Chromosomes. Presence and Origin of Filler DNA Sequences Pieter Windels, Sylvie De Buck, Erik Van Bockstaele, Marc De Loose, and Ann Depicker PMCID: PMC300757 Plants Interacting with Other Organisms Characterization of Four Lectin-Like Receptor Kinases Expressed in Roots of Medicago truncatula. Structure, Location, Regulation of Expression, and Potential Role in the Symbiosis with Sinorhizobium meliloti Maria-Téresa Navarro-Gochicoa, Sylvie Camut, Antonius C.J. Timmers, Andreas Niebel, Christine Hervé, Emmanuel Boutet, Jean-Jacques Bono, Anne Imberty, and Julie V. Cullimore PMCID: PMC300742 Update on Blue Light Signaling Blue Light Signaling through the Cryptochromes and Phototropins. So That's What the Blues Is All About E. Liscum, D. W. Hodgson, and T. J. Campbell PMCID: PMC1540343 Update on Red-Light Sensing The Red Side of Photomorphogenesis B. M. Parks PMCID: PMC1540344 Update on Tropisms Plant Gravitropism. Unraveling the Ups and Downs of a Complex Process E. B. Blancaflor and P. H. Masson PMCID: PMC1540347 Update on Ultraviolet-B Light Responses Ultraviolet-B Radiation-Mediated Responses in Plants. Balancing Damage and Protection H. Frohnmeyer and D. Staiger PMCID: PMC1540342 Whole Plant and Ecophysiology Modeling Grain Nitrogen Accumulation and Protein Composition to Understand the Sink/Source Regulations of Nitrogen Remobilization for Wheat Pierre Martre, John R. Porter, Peter D. Jamieson, and Eugène Triboï PMCID: PMC300747 On the Inside Plant Physiol. 2003 December; 133(4): 1654–1655. PMCID: PMC1540345 Editor's Choice Series on Agricultural Ethics Internalizing the Societal Costs of Agricultural Production Frederick H. Buttel PMCID: PMC523882 Editor's Choice Series on Sharing Data and Materials Intellectual Property Resources for International Development in Agriculture Deborah P. Delmer, Carol Nottenburg, Greg D. Graff, and Alan B. Bennett PMCID: PMC523883 Scientific Correspondence Tools to Study Plant Organelle Biogenesis. Point Mutation Lines with Disrupted Vacuoles and High-Speed Confocal Screening of Green Fluorescent Protein-Tagged Organelles E. L. Avila, J. Zouhar, A. E. Agee, D. G. Carter, S. N. Chary, and N. V. Raikhel PMCID: PMC1540346 The Hot and the Classic Plant Physiol. 2003 December; 133(4): 1671–1672. doi: 10.1104/pp.900096.PMCID: PMC523884 Research Articles Cell Biology and Signal Transduction Ethylene Stimulates Endoreduplication But Inhibits Cytokinesis in Cucumber Hypocotyl Epidermis Haruka Dan, Hidemasa Imaseki, Geoffrey O. Wasteneys, and Haruko Kazama PMCID: PMC300727 Tissue-Specific and Developmentally Regulated Expression of a Cluster of Tandemly Arrayed Cell Wall-Associated Kinase-Like Kinase Genes in Arabidopsis Joseph A. Verica, Lee Chae, Hongyun Tong, Peter Ingmire, and Zheng-Hui He PMCID: PMC300728 Methylated DNA-Binding Proteins from Arabidopsis Mikako Ito, Akiko Koike, Nozomu Koizumi, and Hiroshi Sano PMCID: PMC300729 Bioinformatics Photosynthetic Acclimation Is Reflected in Specific Patterns of Gene Expression in Drought-Stressed Loblolly Pine Jonathan I. Watkinson, Allan A. Sioson, Cecilia Vasquez-Robinet, Maulik Shukla, Deept Kumar, Margaret Ellis, Lenwood S. Heath, Naren Ramakrishnan, Boris Chevone, Layne T. Watson, Leonel van Zyl, Ulrika Egertsdotter, Ronald R. Sederoff, and Ruth Grene PMCID: PMC300725 Finding Unexpected Patterns in Microarray Data Susana Perelman, María Agustina Mazzella, Jorge Muschietti, Tong Zhu, and Jorge J. Casal PMCID: PMC300726 Genome Analysis Glycosylphosphatidylinositol Lipid Anchoring of Plant Proteins. Sensitive Prediction from Sequence- and Genome-Wide Studies for Arabidopsis and Rice Birgit Eisenhaber, Michael Wildpaner, Carolyn J. Schultz, Georg H.H. Borner, Paul Dupree, and Frank Eisenhaber PMCID: PMC300724 |
