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Volume 142(4);  December 2006
High Impact
Regulation of Starch Metabolism in Arabidopsis Leaves
Aleel K. Grennan
Plant Physiol. 2006 December; 142(4): 1343–1345. doi: 10.1104/pp.104.900209.
PMCID: PMC1676037
On the Inside
On the Inside
Peter V. Minorsky
Plant Physiol. 2006 December; 142(4): 1341–1342. doi: 10.1104/pp.104.900212.
PMCID: PMC1676071
Scientific Correspondence
General and Analytic Solutions of the Ortega Equation
Sylwia Lewicka
Plant Physiol. 2006 December; 142(4): 1346–1349. doi: 10.1104/pp.106.086751.
PMCID: PMC1676046
Extracellular γ-Aminobutyrate Mediates Communication between Plants and Other Organisms
Barry J. Shelp, Alan W. Bown, and Denis Faure
Plant Physiol. 2006 December; 142(4): 1350–1352. doi: 10.1104/pp.106.088955.
PMCID: PMC1676054
Research Articles
Biochemical Processes and Macromolecular Structures
Interactions between MUR10/CesA7-Dependent Secondary Cellulose Biosynthesis and Primary Cell Wall Structure
Sonia Bosca, Christopher J. Barton, Neil G. Taylor, Peter Ryden, Lutz Neumetzler, Markus Pauly, Keith Roberts, and Georg J. Seifert
Plant Physiol. 2006 December; 142(4): 1353–1363. doi: 10.1104/pp.106.087700.
PMCID: PMC1676063
Plant Glutathione Peroxidases Are Functional Peroxiredoxins Distributed in Several Subcellular Compartments and Regulated during Biotic and Abiotic Stresses
Nicolas Navrot, Valérie Collin, José Gualberto, Eric Gelhaye, Masakazu Hirasawa, Pascal Rey, David B. Knaff, Emmanuelle Issakidis, Jean-Pierre Jacquot, and Nicolas Rouhier
Plant Physiol. 2006 December; 142(4): 1364–1379. doi: 10.1104/pp.106.089458.
PMCID: PMC1676047
Integrated Analysis of Metabolite and Transcript Levels Reveals the Metabolic Shifts That Underlie Tomato Fruit Development and Highlight Regulatory Aspects of Metabolic Network Behavior
Fernando Carrari, Charles Baxter, Björn Usadel, Ewa Urbanczyk-Wochniak, Maria-Ines Zanor, Adriano Nunes-Nesi, Victoria Nikiforova, Danilo Centero, Antje Ratzka, Markus Pauly, Lee J. Sweetlove, and Alisdair R. Fernie
Plant Physiol. 2006 December; 142(4): 1380–1396. doi: 10.1104/pp.106.088534.
PMCID: PMC1676044
Bioenergetics and Photosynthesis
A Eukaryotic Factor Required for Accumulation of the Chloroplast NAD(P)H Dehydrogenase Complex in Arabidopsis
Ryohei Muraoka, Kenji Okuda, Yoshichika Kobayashi, and Toshiharu Shikanai
Plant Physiol. 2006 December; 142(4): 1683–1689. doi: 10.1104/pp.106.088682.
PMCID: PMC1676045
Cell Biology and Signal Transduction
Exogenous Free Ubiquitin Enhances Lily Pollen Tube Adhesion to an in Vitro Stylar Matrix and May Facilitate Endocytosis of SCA
Sun Tae Kim, Kangling Zhang, Juan Dong, and Elizabeth M. Lord
Plant Physiol. 2006 December; 142(4): 1397–1411. doi: 10.1104/pp.106.086801.
PMCID: PMC1676050
Developmentally Controlled Farnesylation Modulates AtNAP1;1 Function in Cell Proliferation and Cell Expansion during Arabidopsis Leaf Development
Arnaud Galichet and Wilhelm Gruissem
Plant Physiol. 2006 December; 142(4): 1412–1426. doi: 10.1104/pp.106.088344.
PMCID: PMC1676069
Common Plantain. A Collection of Expressed Sequence Tags from Vascular Tissue and a Simple and Efficient Transformation Method
Benjamin Pommerrenig, Inga Barth, Matthias Niedermeier, Sina Kopp, Jürg Schmid, Rex A. Dwyer, Racella J. McNair, Franz Klebl, and Norbert Sauer
Plant Physiol. 2006 December; 142(4): 1427–1441. doi: 10.1104/pp.106.089169.
PMCID: PMC1676067
Dynamic Response of Prevacuolar Compartments to Brefeldin A in Plant Cells
Yu Chung Tse, Sze Wan Lo, Stefan Hillmer, Paul Dupree, and Liwen Jiang
Plant Physiol. 2006 December; 142(4): 1442–1459. doi: 10.1104/pp.106.090423.
PMCID: PMC1676059
NAD(P)H Oscillates in Pollen Tubes and Is Correlated with Tip Growth
Luis Cárdenas, Sylvester T. McKenna, Joseph G. Kunkel, and Peter K. Hepler
Plant Physiol. 2006 December; 142(4): 1460–1468. doi: 10.1104/pp.106.087882.
PMCID: PMC1676060
Molecular Interactions of Arabinogalactan Proteins with Cortical Microtubules and F-Actin in Bright Yellow-2 Tobacco Cultured Cells
Harjinder Singh Sardar, Jie Yang, and Allan M. Showalter
Plant Physiol. 2006 December; 142(4): 1469–1479. doi: 10.1104/pp.106.088716.
PMCID: PMC1676048
Arabidopsis Reversibly Glycosylated Polypeptides 1 and 2 Are Essential for Pollen Development
Georgia Drakakaki, Olga Zabotina, Ivan Delgado, Stéphanie Robert, Kenneth Keegstra, and Natasha Raikhel
Plant Physiol. 2006 December; 142(4): 1480–1492. doi: 10.1104/pp.106.086363.
PMCID: PMC1676068
Ethylene Stimulates Nutations That Are Dependent on the ETR1 Receptor
Brad M. Binder, Ronan C. O'Malley, Wuyi Wang, Tobias C. Zutz, and Anthony B. Bleecker
Plant Physiol. 2006 December; 142(4): 1690–1700. doi: 10.1104/pp.106.087858.
PMCID: PMC1676061
Development and Hormone Action
Proteomic Analysis of Seed Dormancy in Arabidopsis
Kamel Chibani, Sonia Ali-Rachedi, Claudette Job, Dominique Job, Marc Jullien, and Philippe Grappin
Plant Physiol. 2006 December; 142(4): 1493–1510. doi: 10.1104/pp.106.087452.
PMCID: PMC1676062
tie-dyed1 Regulates Carbohydrate Accumulation in Maize Leaves
David M. Braun, Yi Ma, Noriko Inada, Michael G. Muszynski, and R. Frank Baker
Plant Physiol. 2006 December; 142(4): 1511–1522. doi: 10.1104/pp.106.090381.
PMCID: PMC1676051
delayed flowering1 Encodes a Basic Leucine Zipper Protein That Mediates Floral Inductive Signals at the Shoot Apex in Maize
Michael G. Muszynski, Thao Dam, Bailin Li, David M. Shirbroun, Zhenglin Hou, Edward Bruggemann, Rayeann Archibald, Evgueni V. Ananiev, and Olga N. Danilevskaya
Plant Physiol. 2006 December; 142(4): 1523–1536. doi: 10.1104/pp.106.088815.
PMCID: PMC1676038
Environmental Stress and Adaptation to Stress
Physiological Characterization of Two Genes for Na+ Exclusion in Durum Wheat, Nax1 and Nax2
Richard A. James, Romola J. Davenport, and Rana Munns
Plant Physiol. 2006 December; 142(4): 1537–1547. doi: 10.1104/pp.106.086538.
PMCID: PMC1676036
SIZ1 Small Ubiquitin-Like Modifier E3 Ligase Facilitates Basal Thermotolerance in Arabidopsis Independent of Salicylic Acid
Chan Yul Yoo, Kenji Miura, Jing Bo Jin, Jiyoung Lee, Hyeong Cheol Park, David E. Salt, Dae-Jin Yun, Ray A. Bressan, and Paul M. Hasegawa
Plant Physiol. 2006 December; 142(4): 1548–1558. doi: 10.1104/pp.106.088831.
PMCID: PMC1676064
EARLY RESPONSIVE TO DEHYDRATION 15, a Negative Regulator of Abscisic Acid Responses in Arabidopsis
Tarja Kariola, Günter Brader, Elina Helenius, Jing Li, Pekka Heino, and E. Tapio Palva
Plant Physiol. 2006 December; 142(4): 1559–1573. doi: 10.1104/pp.106.086223.
PMCID: PMC1676049
Variation of Enzyme Activities and Metabolite Levels in 24 Arabidopsis Accessions Growing in Carbon-Limited Conditions
Joanna M. Cross, Maria von Korff, Thomas Altmann, Linda Bartzetko, Ronan Sulpice, Yves Gibon, Natalia Palacios, and Mark Stitt
Plant Physiol. 2006 December; 142(4): 1574–1588. doi: 10.1104/pp.106.086629.
PMCID: PMC1676042
Localization and Role of Manganese Superoxide Dismutase in a Marine Diatom
Felisa Wolfe-Simon, Valentin Starovoytov, John R. Reinfelder, Oscar Schofield, and Paul G. Falkowski
Plant Physiol. 2006 December; 142(4): 1701–1709. doi: 10.1104/pp.106.088963.
PMCID: PMC1676035
Nitrite Reduces Cytoplasmic Acidosis under Anoxia
I.G.L. Libourel, P.M. van Bodegom, M.D. Fricker, and R.G. Ratcliffe
Plant Physiol. 2006 December; 142(4): 1710–1717. doi: 10.1104/pp.106.088898.
PMCID: PMC1676055
Genetics, Genomics, and Molecular Evolution
Large-Scale cis-Element Detection by Analysis of Correlated Expression and Sequence Conservation between Arabidopsis and Brassica oleracea
Georg Haberer, Michael T. Mader, Peter Kosarev, Manuel Spannagl, Li Yang, and Klaus F.X. Mayer
Plant Physiol. 2006 December; 142(4): 1589–1602. doi: 10.1104/pp.106.085639.
PMCID: PMC1676041
A Sodium Transporter (HKT7) Is a Candidate for Nax1, a Gene for Salt Tolerance in Durum Wheat
Shaobai Huang, Wolfgang Spielmeyer, Evans S. Lagudah, Richard A. James, J. Damien Platten, Elizabeth S. Dennis, and Rana Munns
Plant Physiol. 2006 December; 142(4): 1718–1727. doi: 10.1104/pp.106.088864.
PMCID: PMC1676039
FRIGIDA LIKE 2 Is a Functional Allele in Landsberg erecta and Compensates for a Nonsense Allele of FRIGIDA LIKE 1
Michael R. Schläppi
Plant Physiol. 2006 December; 142(4): 1728–1738. doi: 10.1104/pp.106.085571.
PMCID: PMC1676065
Plants Interacting with Other Organisms
Modifications to the Arabidopsis Defense Proteome Occur Prior to Significant Transcriptional Change in Response to Inoculation with Pseudomonas syringae
Alexandra M.E. Jones, Vincent Thomas, Mark H. Bennett, John Mansfield, and Murray Grant
Plant Physiol. 2006 December; 142(4): 1603–1620. doi: 10.1104/pp.106.086231.
PMCID: PMC1676056
Molecular Interactions between the Specialist Herbivore Manduca sexta (Lepidoptera, Sphingidae) and Its Natural Host Nicotiana attenuata. VII. Changes in the Plant's Proteome
Ashok P. Giri, Hendrik Wünsche, Sirsha Mitra, Jorge A. Zavala, Alexander Muck, Aleš Svatoš, and Ian T. Baldwin
Plant Physiol. 2006 December; 142(4): 1621–1641. doi: 10.1104/pp.106.088781.
PMCID: PMC1676057
Geminivirus Infection Up-Regulates the Expression of Two Arabidopsis Protein Kinases Related to Yeast SNF1- and Mammalian AMPK-Activating Kinases
Wei Shen and Linda Hanley-Bowdoin
Plant Physiol. 2006 December; 142(4): 1642–1655. doi: 10.1104/pp.106.088476.
PMCID: PMC1676070
Lotus japonicus Nodulation Requires Two GRAS Domain Regulators, One of Which Is Functionally Conserved in a Non-Legume
Anne B. Heckmann, Fabien Lombardo, Hiroki Miwa, Jillian A. Perry, Sue Bunnewell, Martin Parniske, Trevor L. Wang, and J. Allan Downie
Plant Physiol. 2006 December; 142(4): 1739–1750. doi: 10.1104/pp.106.089508.
PMCID: PMC1676053
Systemin in Solanum nigrum. The Tomato-Homologous Polypeptide Does Not Mediate Direct Defense Responses
Silvia Schmidt and Ian T. Baldwin
Plant Physiol. 2006 December; 142(4): 1751–1758. doi: 10.1104/pp.106.089755.
PMCID: PMC1676034
Systems Biology, Molecular Biology, and Gene Regulation
Arabidopsis Orthologs of Maize Chloroplast Splicing Factors Promote Splicing of Orthologous and Species-Specific Group II Introns
Yukari Asakura and Alice Barkan
Plant Physiol. 2006 December; 142(4): 1656–1663. doi: 10.1104/pp.106.088096.
PMCID: PMC1676066
Heterologous Expression and Molecular and Cellular Characterization of CaPUB1 Encoding a Hot Pepper U-Box E3 Ubiquitin Ligase Homolog
Seok Keun Cho, Hoo Sun Chung, Moon Young Ryu, Mi Jin Park, Myeong Min Lee, Young-Yil Bahk, Jungmook Kim, Hyun Sook Pai, and Woo Taek Kim
Plant Physiol. 2006 December; 142(4): 1664–1682. doi: 10.1104/pp.106.087965.
PMCID: PMC1676043
Nuclear Magnetic Resonance Spectroscopy-Based Metabolite Profiling of Transgenic Tomato Fruit Engineered to Accumulate Spermidine and Spermine Reveals Enhanced Anabolic and Nitrogen-Carbon Interactions
Autar K. Mattoo, Anatoli P. Sobolev, Anil Neelam, Ravinder K. Goyal, Avtar K. Handa, and Anna L. Segre
Plant Physiol. 2006 December; 142(4): 1759–1770. doi: 10.1104/pp.106.084400.
PMCID: PMC1676058
Corrections
CORRECTIONS
Plant Physiol. 2006 December; 142(4): 1771. doi: 10.1104/pp.104.900211.
PMCID: PMC1676040
Corrects: Ganesh Sriram, et al. Quantification of Compartmented Metabolic Fluxes in Developing Soybean Embryos by Employing Biosynthetically Directed Fractional 13C Labeling, Two-Dimensional [13C, 1H] Nuclear Magnetic Resonance, and Comprehensive Isotopomer Balancing. Plant Physiol. 2004 October; 136(2): 3043–3057.
CORRECTIONS
Plant Physiol. 2006 December; 142(4): 1771. doi: 10.1104/pp.104.900210.
PMCID: PMC1676052
Corrects: Darren (Fred) Gruis, et al. Surface Position, Not Signaling from Surrounding Maternal Tissues, Specifies Aleurone Epidermal Cell Fate in Maize. Plant Physiol. 2006 July; 141(3): 898–909.
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