| | This journal provides immediate access to some articles. On the Inside On the Inside Peter V. Minorsky Plant Physiol. 2005 September; 139(1): 1–2. doi: 10.1104/pp.104.900173.PMCID: PMC1203351 Editorial Plant Physiology. The Next 5 Years Don Ort Plant Physiol. 2005 September; 139(1): 3–4. doi: 10.1104/pp.104.900169.PMCID: PMC1203352 Bioinformatics Whole-Genome Validation of High-Information-Content Fingerprinting William M. Nelson, Arvind K. Bharti, Ed Butler, Fusheng Wei, Galina Fuks, HyeRan Kim, Rod A. Wing, Joachim Messing, and Carol Soderlund Plant Physiol. 2005 September; 139(1): 27–38. doi: 10.1104/pp.105.061978.PMCID: PMC1203355 Genome Analysis Genome-Wide Identification and Testing of Superior Reference Genes for Transcript Normalization in Arabidopsis Tomasz Czechowski, Mark Stitt, Thomas Altmann, Michael K. Udvardi, and Wolf-Rüdiger Scheible Plant Physiol. 2005 September; 139(1): 5–17. doi: 10.1104/pp.105.063743.PMCID: PMC1203353 Transcription Factor Families Have Much Higher Expansion Rates in Plants than in Animals Shin-Han Shiu, Ming-Che Shih, and Wen-Hsiung Li Plant Physiol. 2005 September; 139(1): 18–26. doi: 10.1104/pp.105.065110.PMCID: PMC1203354 Research Articles Biochemical Processes and Macromolecular Structures A Comprehensive Analysis of the NADP-Malic Enzyme Gene Family of Arabidopsis Mariel C. Gerrard Wheeler, Marcos A. Tronconi, María F. Drincovich, Carlos S. Andreo, Ulf-Ingo Flügge, and Verónica G. Maurino Plant Physiol. 2005 September; 139(1): 39–51. doi: 10.1104/pp.105.065953.PMCID: PMC1203356 Chlorophyll Breakdown in Senescent Arabidopsis Leaves. Characterization of Chlorophyll Catabolites and of Chlorophyll Catabolic Enzymes Involved in the Degreening Reaction Adriana Pružinská, Gaby Tanner, Sylvain Aubry, Iwona Anders, Simone Moser, Thomas Müller, Karl-Hans Ongania, Bernhard Kräutler, Ji-Young Youn, Sarah J. Liljegren, and Stefan Hörtensteiner Plant Physiol. 2005 September; 139(1): 52–63. doi: 10.1104/pp.105.065870.PMCID: PMC1203357 Mitochondria-Driven Changes in Leaf NAD Status Exert a Crucial Influence on the Control of Nitrate Assimilation and the Integration of Carbon and Nitrogen Metabolism Christelle Dutilleul, Caroline Lelarge, Jean-Louis Prioul, Rosine De Paepe, Christine H. Foyer, and Graham Noctor Plant Physiol. 2005 September; 139(1): 64–78. doi: 10.1104/pp.105.066399.PMCID: PMC1203358 Two FAD3 Desaturase Genes Control the Level of Linolenic Acid in Flax Seed Patricia Vrinten, Zhiyuan Hu, Mary-Ann Munchinsky, Gordon Rowland, and Xiao Qiu Plant Physiol. 2005 September; 139(1): 79–87. doi: 10.1104/pp.105.064451.PMCID: PMC1203359 Differential Elicitation of Two Processing Proteases Controls the Processing Pattern of the Trypsin Proteinase Inhibitor Precursor in Nicotiana attenuata Martin Horn, Aparna G. Patankar, Jorge A. Zavala, Jianqiang Wu, Lucie Dolečková-Marešová, Milana Vůjtěchová, Michael Mareš, and Ian T. Baldwin Plant Physiol. 2005 September; 139(1): 375–388. doi: 10.1104/pp.105.064006.PMCID: PMC1203386 Cellular Levels of Glutamyl-tRNA Reductase and Glutamate-1-Semialdehyde Aminotransferase Do Not Control Chlorophyll Synthesis in Chlamydomonas reinhardtii Luiza A. Nogaj, Alaka Srivastava, Robert van Lis, and Samuel I. Beale Plant Physiol. 2005 September; 139(1): 389–396. doi: 10.1104/pp.105.067009.PMCID: PMC1203387 Evidence for In Vitro Binding of Pectin Side Chains to Cellulose Agata W. Zykwinska, Marie-Christine J. Ralet, Catherine D. Garnier, and Jean-François J. Thibault Plant Physiol. 2005 September; 139(1): 397–407. doi: 10.1104/pp.105.065912.PMCID: PMC1203388 Bioenergetics and Photosynthesis Differential Expression of the Arabidopsis Cytochrome c Genes Cytc-1 and Cytc-2. Evidence for the Involvement of TCP-Domain Protein-Binding Elements in Anther- and Meristem-Specific Expression of the Cytc-1 Gene Elina Welchen and Daniel H. Gonzalez Plant Physiol. 2005 September; 139(1): 88–100. doi: 10.1104/pp.105.065920.PMCID: PMC1203360 The Mutant of sll1961, Which Encodes a Putative Transcriptional Regulator, Has a Defect in Regulation of Photosystem Stoichiometry in the Cyanobacterium Synechocystis sp. PCC 6803 Tamaki Fujimori, Mieko Higuchi, Hanayo Sato, Hiroshi Aiba, Masayuki Muramatsu, Yukako Hihara, and Kintake Sonoike Plant Physiol. 2005 September; 139(1): 408–416. doi: 10.1104/pp.105.064782.PMCID: PMC1203389 Cell Biology and Signal Transduction A Plant-Specific Protein Essential for Blue-Light-Induced Chloroplast Movements Stacy L. DeBlasio, Darron L. Luesse, and Roger P. Hangarter Plant Physiol. 2005 September; 139(1): 101–114. doi: 10.1104/pp.105.061887.PMCID: PMC1203361 Cosuppression of Eukaryotic Release Factor 1-1 in Arabidopsis Affects Cell Elongation and Radial Cell Division Katherine Anne Petsch, Joshua Mylne, and José Ramón Botella Plant Physiol. 2005 September; 139(1): 115–126. doi: 10.1104/pp.105.062695.PMCID: PMC1203362 Activation of a Novel Transcription Factor through Phosphorylation by WIPK, a Wound-Induced Mitogen-Activated Protein Kinase in Tobacco Plants Yun-Kiam Yap, Yutaka Kodama, Frank Waller, Kwi Mi Chung, Hirokazu Ueda, Kimiyo Nakamura, Maren Oldsen, Hiroshi Yoda, Yube Yamaguchi, and Hiroshi Sano Plant Physiol. 2005 September; 139(1): 127–137. doi: 10.1104/pp.105.065656.PMCID: PMC1203363 Novel CIPK1-Associated Proteins in Arabidopsis Contain an Evolutionarily Conserved C-Terminal Region That Mediates Nuclear Localization Sung Han Ok, Hye Jin Jeong, Jung Myung Bae, Jeong-Sheop Shin, Sheng Luan, and Kyung-Nam Kim Plant Physiol. 2005 September; 139(1): 138–150. doi: 10.1104/pp.105.065649.PMCID: PMC1203364 An Auxilin-Like J-Domain Protein, JAC1, Regulates Phototropin-Mediated Chloroplast Movement in Arabidopsis Noriyuki Suetsugu, Takatoshi Kagawa, and Masamitsu Wada Plant Physiol. 2005 September; 139(1): 151–162. doi: 10.1104/pp.105.067371.PMCID: PMC1203365 TPK1 Is a Vacuolar Ion Channel Different from the Slow-Vacuolar Cation Channel Hermann Bihler, Christian Eing, Simon Hebeisen, Anja Roller, Katrin Czempinski, and Adam Bertl Plant Physiol. 2005 September; 139(1): 417–424. doi: 10.1104/pp.105.065599.PMCID: PMC1203390 A Copper Chaperone for Superoxide Dismutase That Confers Three Types of Copper/Zinc Superoxide Dismutase Activity in Arabidopsis Chiung-Chih Chu, Wen-Chi Lee, Wen-Yu Guo, Shu-Mei Pan, Lih-Jen Chen, Hsou-min Li, and Tsung-Luo Jinn Plant Physiol. 2005 September; 139(1): 425–436. doi: 10.1104/pp.105.065284.PMCID: PMC1203391 Development and Hormone Action TANMEI/EMB2757 Encodes a WD Repeat Protein Required for Embryo Development in Arabidopsis Kazutoshi Yamagishi, Noriko Nagata, Kelly Matsudaira Yee, Siobhan A. Braybrook, Julie Pelletier, Shozo Fujioka, Shigeo Yoshida, Robert L. Fischer, Robert B. Goldberg, and John J. Harada Plant Physiol. 2005 September; 139(1): 163–173. doi: 10.1104/pp.105.060467.PMCID: PMC1203366 Functional Conservation of PISTILLATA Activity in a Pea Homolog Lacking the PI Motif Ana Berbel, Cristina Navarro, Cristina Ferrándiz, Luis Antonio Cañas, José-Pío Beltrán, and Francisco Madueño Plant Physiol. 2005 September; 139(1): 174–185. doi: 10.1104/pp.104.057687.PMCID: PMC1203367 Overexpression of TAPETUM DETERMINANT1 Alters the Cell Fates in the Arabidopsis Carpel and Tapetum via Genetic Interaction with EXCESS MICROSPOROCYTES1/EXTRA SPOROGENOUS CELLS Shu-Lan Yang, Lixi Jiang, Ching San Puah, Li-Fen Xie, Xue-Qin Zhang, Li-Qun Chen, Wei-Cai Yang, and De Ye Plant Physiol. 2005 September; 139(1): 186–191. doi: 10.1104/pp.105.063529.PMCID: PMC1203368 Interaction of Auxin and ERECTA in Elaborating Arabidopsis Inflorescence Architecture Revealed by the Activation Tagging of a New Member of the YUCCA Family Putative Flavin Monooxygenases Claire Woodward, Shannon M. Bemis, Emi J. Hill, Shinichiro Sawa, Tomokazu Koshiba, and Keiko U. Torii Plant Physiol. 2005 September; 139(1): 192–203. doi: 10.1104/pp.105.063495.PMCID: PMC1203369 Aleurone Cell Identity Is Suppressed following Connation in Maize Kernels Jane Geisler-Lee and Daniel R. Gallie Plant Physiol. 2005 September; 139(1): 204–212. doi: 10.1104/pp.105.064295.PMCID: PMC1203370 Gibberellin Biosynthesis in Developing Pumpkin Seedlings Theo Lange, Jeannette Kappler, Andreas Fischer, Andrea Frisse, Tania Padeffke, Sabine Schmidtke, and Maria João Pimenta Lange Plant Physiol. 2005 September; 139(1): 213–223. doi: 10.1104/pp.105.064162.PMCID: PMC1203371 Nitrogen Deprivation Stimulates Symbiotic Gland Development in Gunnera manicata Wan-Ling Chiu, Gerald A. Peters, Germain Levieille, Patrick C. Still, Sarah Cousins, Bruce Osborne, and Jeff Elhai Plant Physiol. 2005 September; 139(1): 224–230. doi: 10.1104/pp.105.064931.PMCID: PMC1203372 The Arabidopsis PEX12 Gene Is Required for Peroxisome Biogenesis and Is Essential for Development Jilian Fan, Sheng Quan, Travis Orth, Chie Awai, Joanne Chory, and Jianping Hu Plant Physiol. 2005 September; 139(1): 231–239. doi: 10.1104/pp.105.066811.PMCID: PMC1203373 Quantitative Statistical Analysis of cis-Regulatory Sequences in ABA/VP1- and CBF/DREB1-Regulated Genes of Arabidopsis Masaharu Suzuki, Matthew G. Ketterling, and Donald R. McCarty Plant Physiol. 2005 September; 139(1): 437–447. doi: 10.1104/pp.104.058412.PMCID: PMC1203392 A Brassinosteroid-Hypersensitive Mutant of BAK1 Indicates That a Convergence of Photomorphogenic and Hormonal Signaling Modulates Phototropism Craig W. Whippo and Roger P. Hangarter Plant Physiol. 2005 September; 139(1): 448–457. doi: 10.1104/pp.105.064444.PMCID: PMC1203393 Environmental Stress and Adaptation CML24, Regulated in Expression by Diverse Stimuli, Encodes a Potential Ca2+ Sensor That Functions in Responses to Abscisic Acid, Daylength, and Ion Stress Nikkí A. Delk, Keith A. Johnson, Naweed I. Chowdhury, and Janet Braam Plant Physiol. 2005 September; 139(1): 240–253. doi: 10.1104/pp.105.062612.PMCID: PMC1203374 Lateral Diffusion of CO2 in Leaves Is Not Sufficient to Support Photosynthesis James I.L. Morison, Emily Gallouët, Tracy Lawson, Gabriel Cornic, Raphaèle Herbin, and Neil R. Baker Plant Physiol. 2005 September; 139(1): 254–266. doi: 10.1104/pp.105.062950.PMCID: PMC1203375 Enhancing Arabidopsis Salt and Drought Stress Tolerance by Chemical Priming for Its Abscisic Acid Responses Gabor Jakab, Jurriaan Ton, Victor Flors, Laurent Zimmerli, Jean-Pierre Métraux, and Brigitte Mauch-Mani Plant Physiol. 2005 September; 139(1): 267–274. doi: 10.1104/pp.105.065698.PMCID: PMC1203376 The Root Tip and Accelerating Region Suppress Elongation of the Decelerating Region without any Effects on Cell Turgor in Primary Roots of Maize under Water Stress Yumi Shimazaki, Taiichiro Ookawa, and Tadashi Hirasawa Plant Physiol. 2005 September; 139(1): 458–465. doi: 10.1104/pp.105.062091.PMCID: PMC1203394 Effects of Water Stress on Respiration in Soybean Leaves Miquel Ribas-Carbo, Nicolas L. Taylor, Larry Giles, Silvia Busquets, Patrick M. Finnegan, David A. Day, Hans Lambers, Hipólito Medrano, Joseph A. Berry, and Jaume Flexas Plant Physiol. 2005 September; 139(1): 466–473. doi: 10.1104/pp.105.065565.PMCID: PMC1203395 Diurnal and Seasonal Variation of Isoprene Biosynthesis-Related Genes in Grey Poplar Leaves Sabine Mayrhofer, Markus Teuber, Ina Zimmer, Sandrine Louis, Robert J. Fischbach, and Jörg-Peter Schnitzler Plant Physiol. 2005 September; 139(1): 474–484. doi: 10.1104/pp.105.066373.PMCID: PMC1203396 The Capacity for Thermal Protection of Photosynthetic Electron Transport Varies for Different Monoterpenes in Quercus ilex Lucian O. Copolovici, Iolanda Filella, Joan Llusià, Ülo Niinemets, and Josep Peñuelas Plant Physiol. 2005 September; 139(1): 485–496. doi: 10.1104/pp.105.065995.PMCID: PMC1203397 Submergence-Induced Morphological, Anatomical, and Biochemical Responses in a Terrestrial Species Affect Gas Diffusion Resistance and Photosynthetic Performance Liesje Mommer, Thijs L. Pons, Mieke Wolters-Arts, Jan Henk Venema, and Eric J.W. Visser Plant Physiol. 2005 September; 139(1): 497–508. doi: 10.1104/pp.105.064725.PMCID: PMC1203398 Genetics, Genomics, and Molecular Evolution Dedifferentiation of Tobacco Cells Is Associated with Ribosomal RNA Gene Hypomethylation, Increased Transcription, and Chromatin Alterations Blazena Koukalova, Miloslava Fojtova, Kar Yoong Lim, Jaroslav Fulnecek, Andrew Rowland Leitch, and Ales Kovarik Plant Physiol. 2005 September; 139(1): 275–286. doi: 10.1104/pp.105.061788.PMCID: PMC1203377 A Novel Plant Major Intrinsic Protein in Physcomitrella patens Most Similar to Bacterial Glycerol Channels Sofia Gustavsson, Anne-Sophie Lebrun, Kristina Nordén, François Chaumont, and Urban Johanson Plant Physiol. 2005 September; 139(1): 287–295. doi: 10.1104/pp.105.063198.PMCID: PMC1203378 Loss of Function of OsDCL1 Affects MicroRNA Accumulation and Causes Developmental Defects in Rice Bin Liu, PingChuan Li, Xin Li, ChunYan Liu, ShouYun Cao, ChengCai Chu, and XiaoFeng Cao Plant Physiol. 2005 September; 139(1): 296–305. doi: 10.1104/pp.105.063420.PMCID: PMC1203379 The Transcribed 165-bp CentO Satellite Is the Major Functional Centromeric Element in the Wild Rice Species Oryza punctata Wenli Zhang, Chuandeng Yi, Weidong Bao, Bin Liu, Jiajun Cui, Hengxiu Yu, Xiaofeng Cao, Minghong Gu, Min Liu, and Zhukuan Cheng Plant Physiol. 2005 September; 139(1): 306–315. doi: 10.1104/pp.105.064147.PMCID: PMC1203380 Genome-Wide Identification of Potential Plant E2F Target Genes Klaas Vandepoele, Kobe Vlieghe, Kobe Florquin, Lars Hennig, Gerrit T.S. Beemster, Wilhelm Gruissem, Yves Van de Peer, Dirk Inzé, and Lieven De Veylder Plant Physiol. 2005 September; 139(1): 316–328. doi: 10.1104/pp.105.066290.PMCID: PMC1203381 Homeodomain Leucine Zipper Class I Genes in Arabidopsis. Expression Patterns and Phylogenetic Relationships Eva Henriksson, Anna S.B. Olsson, Henrik Johannesson, Henrik Johansson, Johannes Hanson, Peter Engström, and Eva Söderman Plant Physiol. 2005 September; 139(1): 509–518. doi: 10.1104/pp.105.063461.PMCID: PMC1203399 Plants Interacting with Other Organisms Organization and Metabolism of Plastids and Mitochondria in Arbuscular Mycorrhizal Roots of Medicago truncatula Swanhild Lohse, Willibald Schliemann, Christian Ammer, Joachim Kopka, Dieter Strack, and Thomas Fester Plant Physiol. 2005 September; 139(1): 329–340. doi: 10.1104/pp.105.061457.PMCID: PMC1203382 NpPDR1, a Pleiotropic Drug Resistance-Type ATP-Binding Cassette Transporter from Nicotiana plumbaginifolia, Plays a Major Role in Plant Pathogen Defense Yvan Stukkens, Alain Bultreys, Sébastien Grec, Tomasz Trombik, Delphine Vanham, and Marc Boutry Plant Physiol. 2005 September; 139(1): 341–352. doi: 10.1104/pp.105.062372.PMCID: PMC1203383 Ectopic Expression of Constitutively Activated RACB in Barley Enhances Susceptibility to Powdery Mildew and Abiotic Stress Holger Schultheiss, Götz Hensel, Jafargholi Imani, Sylvia Broeders, Uwe Sonnewald, Karl-Heinz Kogel, Jochen Kumlehn, and Ralph Hückelhoven Plant Physiol. 2005 September; 139(1): 353–362. doi: 10.1104/pp.105.066613.PMCID: PMC1203384 What Do Microbes Encounter at the Plant Surface? Chemical Composition of Pea Leaf Cuticular Waxes Franka Gniwotta, Gerd Vogg, Vanessa Gartmann, Tim L.W. Carver, Markus Riederer, and Reinhard Jetter Plant Physiol. 2005 September; 139(1): 519–530. doi: 10.1104/pp.104.053579.PMCID: PMC1203400 Whole Plant and Ecophysiology Cassava Plants with a Depleted Cyanogenic Glucoside Content in Leaves and Tubers. Distribution of Cyanogenic Glucosides, Their Site of Synthesis and Transport, and Blockage of the Biosynthesis by RNA Interference Technology Kirsten Jørgensen, Søren Bak, Peter Kamp Busk, Charlotte Sørensen, Carl Erik Olsen, Johanna Puonti-Kaerlas, and Birger Lindberg Møller Plant Physiol. 2005 September; 139(1): 363–374. doi: 10.1104/pp.105.065904.PMCID: PMC1203385 ETHY. A Theory of Fruit Climacteric Ethylene Emission Michel Génard and Barbara Gouble Plant Physiol. 2005 September; 139(1): 531–545. doi: 10.1104/pp.105.063339.PMCID: PMC1203401 Do Xylem Fibers Affect Vessel Cavitation Resistance? Anna L. Jacobsen, Frank W. Ewers, R. Brandon Pratt, William A. Paddock, III, and Stephen D. Davis Plant Physiol. 2005 September; 139(1): 546–556. doi: 10.1104/pp.104.058404.PMCID: PMC1203402 Corrections Plant Physiol. 2005 September; 139(1): 557. doi: 10.1104/pp.104.900170.PMCID: PMC1203403 Corrects: Hong Shen, et al. Citrate Secretion Coupled with the Modulation of Soybean Root Tip under Aluminum Stress. Up-Regulation of Transcription, Translation, and Threonine-Oriented Phosphorylation of Plasma Membrane H+-ATPase. Plant Physiol. 2005 May; 138(1): 287–296. Plant Physiol. 2005 September; 139(1): 558. doi: 10.1104/pp.104.900171.PMCID: PMC1203404 Corrects: Takashi Emi, et al. Isolation of a Protein Interacting with Vfphot1a in Guard Cells of Vicia faba. Plant Physiol. 2005 July; 138(3): 1615–1626. Plant Physiol. 2005 September; 139(1): 559. doi: 10.1104/pp.104.900172.PMCID: PMC1203405 Corrects: Aaron M. Rashotte, et al. Basipetal Auxin Transport Is Required for Gravitropism in Roots of Arabidopsis. Plant Physiol. 2000 February; 122(2): 481–490. |