| | Articles Synthesis and recognition by DNA polymerases of a reactive nucleoside, 1-(2-deoxy-β-d-erythro-pentofuranosyl)-imidazole-4-hydrazide Heike Strobel, Laurence Dugué, Philippe Marlière, and Sylvie Pochet PMCID: PMC113855 Charge neutralization and DNA bending by the Escherichia coli catabolite activator protein Philip R. Hardwidge, Jeff M. Zimmerman, and L. James Maher, III PMCID: PMC113849 Over-representation of repeats in stress response genes: a strategy to increase versatility under stressful conditions? Eduardo P. C. Rocha, Ivan Matic, and François Taddei PMCID: PMC113848 A putative RNA editing from U to C in a mouse mitochondrial transcript Jaime Villegas, Ilse Müller, Jacob Arredondo, Rodrigo Pinto, and Luis O. Burzio PMCID: PMC113838 Pyrococcus genome comparison evidences chromosome shuffling-driven evolution Yvan Zivanovic, Philippe Lopez, Hervé Philippe, and Patrick Forterre PMCID: PMC113857 Design of antisense oligonucleotides stabilized by locked nucleic acids Jens Kurreck, Eliza Wyszko, Clemens Gillen, and Volker A. Erdmann PMCID: PMC113840 S6 phosphorylation-independent pathways regulate translation of 5′-terminal oligopyrimidine tract-containing mRNAs in differentiating hematopoietic cells Diane Barth-Baus, Carl A. Stratton, Lou Parrott, Howard Myerson, Oded Meyuhas, Dennis J. Templeton, Gary E. Landreth, and Jack O. Hensold PMCID: PMC113832 Modulation of mitochondrial transcription in response to mtDNA depletion and repletion in HeLa cells Bonnie L. Seidel-Rogol and Gerald S. Shadel PMCID: PMC113853 Two self-splicing group I introns in the ribonucleotide reductase large subunit gene of Staphylococcus aureus phage Twort Markus Landthaler, Ulrike Begley, Nelson C. Lau, and David A. Shub PMCID: PMC113830 Control of IL-2Rα gene expression: structural changes within the proximal enhancer/core promoter during T-cell development Jung-Hua Yeh, Salvatore Spicuglia, Sanjeex Kumar, Albert Sanchez-Sevilla, Pierre Ferrier, and Jean Imbert PMCID: PMC113837 Identification of histone H4-like TAF in Schizosaccharomyces pombe as a protein that interacts with WD repeat-containing TAF Hiroshi Mitsuzawa and Akira Ishihama PMCID: PMC113851 Phosphorylation of mismatch repair proteins MSH2 and MSH6 affecting MutSα mismatch-binding activity Markus Christmann, Maja T. Tomicic, and Bernd Kaina PMCID: PMC113836 A single cell cycle genes homology region (CHR) controls cell cycle-dependent transcription of the cdc25C phosphatase gene and is able to cooperate with E2F or Sp1/3 sites Ulrike Haugwitz, Mark Wasner, Marcus Wiedmann, Katja Spiesbach, Karen Rother, Joachim Mössner, and Kurt Engeland PMCID: PMC113852 Purification and characterization of transcription factor IIIA from Acanthamoeba castellanii Nicholas Polakowski and Marvin R. Paule PMCID: PMC113847 Insertions in the anticodon loop of tRNA1Gln(sufG) and tRNALys promote quadruplet decoding of CAAA Michael O’Connor PMCID: PMC113831 The p53-induced mouse zinc finger protein wig-1 binds double-stranded RNA with high affinity Cristina Méndez-Vidal, Margareta T. Wilhelm, Fredrik Hellborg, Wang Qian, and Klas G. Wiman PMCID: PMC113850 Heterogeneity in the rate and pattern of germline mutation at individual microsatellite loci Jesper Brohede, Craig R. Primmer, Anders Møller, and Hans Ellegren PMCID: PMC113841 Release of replication termination controls mitochondrial DNA copy number after depletion with 2′,3′-dideoxycytidine Timothy A. Brown and David A. Clayton PMCID: PMC113833 Predominance of six different hexanucleotide recoding signals 3′ of read-through stop codons Lance Harrell, Ulrich Melcher, and John F. Atkins PMCID: PMC113845 Two-piece tmRNA in cyanobacteria and its structural analysis Cyril Gaudin, Xiong Zhou, Kelly P. Williams, and Brice Felden PMCID: PMC113835 Descent of a split RNA Kelly P. Williams PMCID: PMC113834 Genomic repeats, genome plasticity and the dynamics of Mycoplasma evolution Eduardo P. C. Rocha and Alain Blanchard PMCID: PMC113839 Characterization of PREP2, a paralog of PREP1, which defines a novel sub-family of the MEINOX TALE homeodomain transcription factors C. Fognani, C. Kilstrup-Nielsen, J. Berthelsen, E. Ferretti, V. Zappavigna, and F. Blasi PMCID: PMC113854 CopR binds and bends its target DNA: a footprinting and fluorescence resonance energy transfer study Katrin Steinmetzer, Joachim Behlke, Sabine Brantl, and Mike Lorenz PMCID: PMC113856 Human DNA polymerase mu (Pol µ) exhibits an unusual replication slippage ability at AAF lesion Jean-Baptiste Duvauchelle, Luis Blanco, Robert P. P. Fuchs, and Agnes M. Cordonnier PMCID: PMC113843 Functional characterization of the interferon regulatory element in the enhancer 1 region of the hepatitis B virus genome Flavio F. Alcantara, Hong Tang, and Alan McLachlan PMCID: PMC113846 Searching for RNA genes using base-composition statistics Peter Schattner PMCID: PMC113829 Heteroduplexes in mixed-template amplifications: formation, consequence and elimination by ‘reconditioning PCR’ Janelle R. Thompson, Luisa A. Marcelino, and Martin F. Polz PMCID: PMC113844 Effect of primary and secondary structure of oligodeoxyribonucleotides on the fluorescent properties of conjugated dyes Irina Nazarenko, Rick Pires, Brian Lowe, Mohamad Obaidy, and Ayoub Rashtchian PMCID: PMC113842 NAR Methods Online Relative expression software tool (REST©) for group-wise comparison and statistical analysis of relative expression results in real-time PCR Michael W. Pfaffl, Graham W. Horgan, and Leo Dempfle PMCID: PMC113859 Multiplex quantitative PCR using self-quenched primers labeled with a single fluorophore Irina Nazarenko, Brian Lowe, Marlene Darfler, Pranvera Ikonomi, David Schuster, and Ayoub Rashtchian PMCID: PMC113860 A two-step strategy for constructing specifically self-subtracted cDNA libraries Paolo Laveder, Cristiano De Pittà, Stefano Toppo, Giorgio Valle, and Gerolamo Lanfranchi PMCID: PMC113861 High throughput measurement of duplex, triplex and quadruplex melting curves using molecular beacons and a LightCycler Richard A. J. Darby, Matthieu Sollogoub, Catherine McKeen, Lynda Brown, Antonina Risitano, Nicholas Brown, Christopher Barton, Tom Brown, and Keith R. Fox PMCID: PMC113862 A novel strategy for the functional cloning of enzymes using filamentous phage display: the case of nucleotidyl transferases Erika Brunet, Camille Chauvin, Valérie Choumet, and Jean-Luc Jestin PMCID: PMC113863 Erratum Nucleic Acids Res. 2002 May 1; 30(9): 2096. PMCID: PMC113858 Corrects: ERRATUM. Nucleic Acids Res. 2002 May 1; 30(9): 2096. |
