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Volume 15(7);  July 2006
Review
Lessons in stability from thermophilic proteins
Abbas Razvi and J. Martin Scholtz
Protein Sci. 2006 July; 15(7): 1569–1578. doi: 10.1110/ps.062130306.
PMCID: PMC2242557
Articles
CIRSE: A solvation energy estimator compatible with flexible protein docking and design applications
David S. Cerutti, Tushar Jain, and J. Andrew McCammon
Protein Sci. 2006 July; 15(7): 1579–1596. doi: 10.1110/ps.051985106.
PMCID: PMC2242569
The nature of amino acid 482 of human ABCG2 affects substrate transport and ATP hydrolysis but not substrate binding
Karin F.K. Ejendal, Ndeye Khady Diop, Linda C. Schweiger, and Christine A. Hrycyna
Protein Sci. 2006 July; 15(7): 1597–1607. doi: 10.1110/ps.051998406.
PMCID: PMC2242565
Cooperativity and the origins of rapid, single-exponential kinetics in protein folding
Patrícia F.N. Faísca and Kevin W. Plaxco
Protein Sci. 2006 July; 15(7): 1608–1618. doi: 10.1110/ps.062180806.
PMCID: PMC2242573
Fluorescence resonance energy transfer study of subunit exchange in human lens crystallins and congenital cataract crystallin mutants
Jack J. Liang and Bing-Fen Liu
Protein Sci. 2006 July; 15(7): 1619–1627. doi: 10.1110/ps.062216006.
PMCID: PMC2242568
X-ray structure of potato epoxide hydrolase sheds light on substrate specificity in plant enzymes
Sherry L. Mowbray, Lisa T. Elfström, Kerstin M. Ahlgren, C. Evalena Andersson, and Mikael Widersten
Protein Sci. 2006 July; 15(7): 1628–1637. doi: 10.1110/ps.051792106.
PMCID: PMC2265100
Sequence of events in folding mechanism: Beyond the Gō model
Ludovico Sutto, Guido Tiana, and Ricardo A. Broglia
Protein Sci. 2006 July; 15(7): 1638–1652. doi: 10.1110/ps.052056006.
PMCID: PMC2242563
A composite score for predicting errors in protein structure models
David Eramian, Min-yi Shen, Damien Devos, Francisco Melo, Andrej Sali, and Marc A. Marti-Renom
Protein Sci. 2006 July; 15(7): 1653–1666. doi: 10.1110/ps.062095806.
PMCID: PMC2242555
Phylogenetic and mutational analyses reveal key residues for UDP-glucuronic acid binding and activity of β1,3-glucuronosyltransferase I (GlcAT-I)
Magali Fondeur-Gelinotte, Virginie Lattard, Rafael Oriol, Rosella Mollicone, Jean-Claude Jacquinet, Guillermo Mulliert, Sandrine Gulberti, Patrick Netter, Jacques Magdalou, Mohamed Ouzzine, and Sylvie Fournel-Gigleux
Protein Sci. 2006 July; 15(7): 1667–1678. doi: 10.1110/ps.062089106.
PMCID: PMC2242556
Bacteriorhodopsin chimeras containing the third cytoplasmic loop of bovine rhodopsin activate transducin for GTP/GDP exchange
Andrew H. Geiser, Michael K. Sievert, Lian-Wang Guo, Jennifer E. Grant, Mark P. Krebs, Dimitrios Fotiadis, Andreas Engel, and Arnold E. Ruoho
Protein Sci. 2006 July; 15(7): 1679–1690. doi: 10.1110/ps.062192306.
PMCID: PMC2265101
Structural studies of human alkaline phosphatase in complex with strontium: Implication for its secondary effect in bones
Paola Llinas, Michel Masella, Torgny Stigbrand, André Ménez, Enrico A. Stura, and Marie Hélène Le Du
Protein Sci. 2006 July; 15(7): 1691–1700. doi: 10.1110/ps.062123806.
PMCID: PMC2242561
Structural analysis of an “open” form of PBP1B from Streptococcus pneumoniae
Andrew L. Lovering, Liza De Castro, Daniel Lim, and Natalie C.J. Strynadka
Protein Sci. 2006 July; 15(7): 1701–1709. doi: 10.1110/ps.062112106.
PMCID: PMC2242572
The effects of sodium sulfate, glycosaminoglycans, and Congo red on the structure, stability, and amyloid formation of an immunoglobulin light-chain protein
Richard W. Mclaughlin, Janelle K. De Stigter, Laura A. Sikkink, Elizabeth M. Baden, and Marina Ramirez-Alvarado
Protein Sci. 2006 July; 15(7): 1710–1722. doi: 10.1110/ps.051997606.
PMCID: PMC2242560
A limited universe of membrane protein families and folds
Amit Oberai, Yungok Ihm, Sanguk Kim, and James U. Bowie
Protein Sci. 2006 July; 15(7): 1723–1734. doi: 10.1110/ps.062109706.
PMCID: PMC2242558
Crystal structure of trehalose-6-phosphate phosphatase–related protein: Biochemical and biological implications
Krishnamurthy N. Rao, Desigan Kumaran, Jayaraman Seetharaman, Jeffrey B. Bonanno, Stephen K. Burley, and Subramanyam Swaminathan
Protein Sci. 2006 July; 15(7): 1735–1744. doi: 10.1110/ps.062096606.
PMCID: PMC2242562
Identification of cognate ligands for the Escherichia coli phnD protein product and engineering of a reagentless fluorescent biosensor for phosphonates
Shahir S. Rizk, Matthew J. Cuneo, and Homme W. Hellinga
Protein Sci. 2006 July; 15(7): 1745–1751. doi: 10.1110/ps.062135206.
PMCID: PMC2242554
Cooperative α-helix unfolding in a protein–DNA complex from hydrogen–deuterium exchange
Roberto K. Salinas, Tammo Diercks, Robert Kaptein, and Rolf Boelens
Protein Sci. 2006 July; 15(7): 1752–1759. doi: 10.1110/ps.051938006.
PMCID: PMC2265102
The layered fold of the TSR domain of P. falciparum TRAP contains a heparin binding site
Helena Tossavainen, Tero Pihlajamaa, Toni K. Huttunen, Erkki Raulo, Heikki Rauvala, Perttu Permi, and Ilkka Kilpeläinen
Protein Sci. 2006 July; 15(7): 1760–1768. doi: 10.1110/ps.052068506.
PMCID: PMC2242559
Native state energetics of the Src SH2 domain: Evidence for a partially structured state in the denatured ensemble
David Wildes, L. Meadow Anderson, Alex Sabogal, and Susan Marqusee
Protein Sci. 2006 July; 15(7): 1769–1779. doi: 10.1110/ps.062136006.
PMCID: PMC2242571
Enhancement of bound-state residual dipolar couplings: Conformational analysis of lactose bound to Galectin-3
Tiandi Zhuang, Hakon Leffler, and James H. Prestegard
Protein Sci. 2006 July; 15(7): 1780–1790. doi: 10.1110/ps.051994306.
PMCID: PMC2242564
For the Record
Dissociation of intermolecular disulfide bonds in P22 tailspike protein intermediates in the presence of SDS
Junghwa Kim and Anne Skaja Robinson
Protein Sci. 2006 July; 15(7): 1791–1793. doi: 10.1110/ps.062197206.
PMCID: PMC2040104
Molecular architecture of E. coli purine nucleoside phosphorylase studied by analytical ultracentrifugation and CD spectroscopy
Anna Modrak-Wójcik, Katarzyna Stępniak, Vladimir Akoev, Michał Żółkiewski, and Agnieszka Bzowska
Protein Sci. 2006 July; 15(7): 1794–1800. doi: 10.1110/ps.062183206.
PMCID: PMC2242567
Mutagenic exploration of the cross-seeding and fibrillation propensity of Alzheimer's β-amyloid peptide variants
Alexander Peim, Peter Hortschansky, Tony Christopeit, Volker Schroeckh, Walter Richter, and Marcus Fändrich
Protein Sci. 2006 July; 15(7): 1801–1805. doi: 10.1110/ps.062116206.
PMCID: PMC2242566
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