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Editor-in-Chief Melissa Norton, MD
Biology Editor Penelope Webb, PhD
In-house Editor Matthew Kaiser
Welcome to BMC Genomics published by BioMed Central
BMC Genomics is an open access journal publishing original peer-reviewed research articles in all aspects of genome-scale analysis, functional genomics, and proteomics.
BMC Genomics (ISSN 1471-2164) is indexed/tracked/covered by PubMed, MEDLINE, BIOSIS, CAS, Scopus, EMBASE, Zoological Record, Thomson Reuters (ISI) and Google Scholar.
Featured articles
BMC Genomics 2009, 10 :219
Rapid sequencing of the transcribed genes of coral larvae is made possible by the use of adapted next-generation sequencing methods, revealing around 11,000 expressed genes and candidate genes for the response to temperature stress.
BMC Genomics 2009, 10 :189
Genes arranged head-to-head and sharing a common bi-directional promoter region display a conserved intergenic architecture in cows, humans and other mammals, which will help to identify regulatory regions and unrecognized genes in other mammals’ genomes.
BMC Genomics 2009, 10 :180
The assembly of the bovine genome used both bacterial artificial chromosome (BAC) and whole genome shotgun (WGS) sequences, exploiting the strengths of each to provide a more accurate and comprehensive coverage of the genome.
BMC Genomics 2009, 10 :151
The norepinephrine transporter (NET) is a cocaine and antidepressant target and knockout mice show altered expression of genes in signaling pathways related to neural crest formation and noradrenergic cell differentiation during embryonic development.
BMC Genomics 2009, 10 :130
In a yeast model of growth under iron-limited conditions, the role of genes for intracellular trafficking and the peroxisome is determined by combining deletion mutants and expression profiling, which reveal separate metabolic pathway components.
Raleigh, NC, USA. 25-26 October 2007 BMC Proceedings 2008,
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BMC Proceedings 2009, 3 (Suppl 1)Content ]
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Research article
Measuring differential gene expression by short read sequencing: quantitative comparison to 2-channel gene expression microarrays Joshua S Bloom, Zia Khan, Leonid Kruglyak, Mona Singh, Amy A Caudy BMC Genomics 2009, 10 :221 (12 [Abstract ] [Provisional PDF ]
Research article
A network-based integrative approach to prioritize reliable hits from multiple genome-wide RNAi screens in Drosophila Li Wang, Zhidong Tu, Fengzhu Sun BMC Genomics 2009, 10 :220 (12 [Abstract ] [Provisional PDF ]
Research article
Sequencing and de novo analysis of a coral larval transcriptome using 454 GS-Flx Eli Meyer, Galina V Aglyamova, Shi Wang, Jade Buchanan-Carter, David Abrego, John K Colbourne, Bette L Willis, Mikhail V Matz BMC Genomics 2009, 10 :219 (12 [Abstract ] [Provisional PDF ]
Research article
Correlation of expression profiles between microRNAs and mRNA targets using NCI-60 data Yu-Ping Wang, Kuo-Bin Li BMC Genomics 2009, 10 :218 (12 [Abstract ] [Provisional PDF ]
Research article
Ixodes scapularis tick serine proteinase inhibitor (serpin) gene family; annotation and transcriptional analyses Albert Mulenga, Rabuesak Khumthong, Katelyn C. Chalaire BMC Genomics 2009, 10 :217 (12 [Abstract ] [Provisional PDF ]
Research article
Comparative genomics of Toll-like receptor signalling in five species Oliver C Jann, Annemarie King, Nestor Lopez Corrales, Susan I Anderson, Kirsty Jensen, Tahar Ait-ali, Haizhou Tang, Chunhua Wu, Noelle E Cockett, Alan L Archibald, Elizabeth J Glass BMC Genomics 2009, 10 :216 (11 [Abstract ] [Provisional PDF ]
Research article
Dynamic changes in transcripts during regeneration of the secondary vascular system in Populus tomentosa Carr. revealed by cDNA microarrays Minjie Wang, Xiaoli Qi, Shutang Zhao, Shougong Zhang, Meng-Zhu Lu BMC Genomics 2009, 10 :215 (11 [Abstract ] [Provisional PDF ] [PubMed ] [Related articles ]
Research article
Identification and target prediction of miRNAs specifically expressed in rat neural tissue You-Jia Hua, Zhong-Yi Tang, Kang Tu, Li Zhu, Yi-Xue Li, Lu Xie, Hua-Sheng Xiao BMC Genomics 2009, 10 :214 (9 [Abstract ] [Provisional PDF ] [PubMed ] [Related articles ]
Research article
Identification of genes expressed in the hermaphrodite germ line of C. elegans using SAGE Xin Wang, Yongjun Zhao, Kim Wong, Peter Ehlers, Yuji Kohara, Steven J Jones, Marco A Mara, Robert A Holt, Donald G Moerman, Dave Hansen BMC Genomics 2009, 10 :213 (9 [Abstract ] [Provisional PDF ]
Research article
Water deficit alters differentially metabolic pathways affecting important flavor and quality traits in grape berries of Cabernet Sauvignon and Chardonnay Laurent G Deluc, David R Quilici, Alain Decendit, Jerome Grimplet, Matthew D Wheatley, Karen A Schlauch, Jean-Michel Merillon, John C Cushman, Grant R Cramer BMC Genomics 2009, 10 :212 (8 [Abstract ] [Provisional PDF ]
Methodology article
Incorporating functional inter-relationships into protein function prediction algorithms Gaurav Pandey, Chad L. Myers, Vipin Kumar BMC Bioinformatics 2009, 10 :142 (12 [Abstract ] [Provisional PDF ]
Research article
Cold- and light-induced changes in the transcriptome of wheat leading to phase transition from vegetative to reproductive growth Mark O Winfield, Chungui Lu, Ian D Wilson, Jane A Coghill, Keith J Edwards BMC Plant Biology 2009, 9 :55 (11 [Abstract ] [Provisional PDF ]
Analytic perspective
Can we apply the Mendelian randomization methodology without considering epigenetic effects?
Ikechukwu U Ogbuanu, Hongmei Zhang, Wilfried Karmaus Emerging Themes in Epidemiology 2009, 6 :3 (11 [Abstract ] [Provisional PDF ]
Research article
Data integration from two microarray platforms identifies bi-allelic genetic inactivation of RIC8A in a breast cancer cell line Aslaug Aamodt Muggerud, Henrik Edgren, Maija Wolf, Kristine Kleivi, Emelyne Dejeux, Jorg Tost, Therese Sorlie, Olli Kallioniemi BMC Medical Genomics 2009, 2 :26 (11 [Abstract ] [Provisional PDF ]
Research article
Similar gene expression profiles of sporadic, PGL2-, and SDHD-linked paragangliomas suggest a common pathway to tumorigenesis Erik F Hensen, Jelle J Goeman, Jan Oosting, Andel GL van der Mey, Pancras CW Hogendoorn, Cor WRJ Cremers, Peter Devilee, Cees J Cornelisse BMC Medical Genomics 2009, 2 :25 (11 [Abstract ] [Provisional PDF ]
Database
eCOMPAGT - efficient Combination and Management of Phenotypes and Genotypes for Genetic Epidemiology Sebastian Schoenherr, Hansi Weissensteiner, Stefan Coassin, Guenther Specht, Florian Kronenberg, Anita Brandstaetter BMC Bioinformatics 2009, 10 :139 (11 [Abstract ] [Provisional PDF ]
Research
Insights into the regulation of intrinsically disordered proteins in the human proteome by analysing sequence and gene expression data Yvonne JK Edwards, Anna Lobley, Melissa M Pentony, David T Jones Genome Biology 2009, 10 :R50 (11 [Abstract ] [Provisional PDF ]
Research article
Identification, characterization and utilization of unigene derived microsatellite markers in tea (Camellia sinensis, L) Ram Kumar Sharma, Pankaj Bhardwaj, Renu Negi, Trilochan Mohapatra, Paramvir Singh Ahuja BMC Plant Biology 2009, 9 :53 (11 [Abstract ] [Provisional PDF ]
Commentary
Studying chromosome-wide transcriptional networks: new insights into disease? Philipp Kapranov Genome Med 2009, 1 :50 (11 [Abstract ] [Full text ] [PDF ]
Research article
Insights into the evolution of the snail superfamily from metazoan wide molecular phylogenies and expression data in annelids Pierre Kerner, Johanne Hung, Julien Behague, Martine Le Gouar, Guillaume Balavoine, Michel Vervoort BMC Evolutionary Biology 2009, 9 :94 (9 [Abstract ] [Provisional PDF ] [PubMed ] [Related articles ]
Featured articles 
