CGAP       the Cancer Genome Anatomy Project
    CGAP HOW TO GenesChromosomesTissuesSAGEPathwaysTools  

Genes

Gene Tools

SNP Tools

Transcriptome Analysis

CGAP Data

Purchase CGAP Reagents

Related Links

Quick Links:

NCI Logo


Gene Info

Gene Information For:Hs. TAF15, TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa
Sequence ID:NM_003487
NM_139215

Database Links

UniGeneEntrez GeneOMIMSNPViewerAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q11.1-q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 31163314 - 31164771

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6067044Full LengthBC046099TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa
4148744IncompleteBC039129TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa
4829714IncompleteBC030591TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa
5266186IncompleteBC048985TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003478  NP_631961  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_003487 NP_003478   RRM_1
zf-RanBP
NM_139215 NP_631961 Q92804 RRM_1
zf-RanBP

Related Sequences

 
mRNAGenPeptSwissProt
U51334 AAC50932 Q92804
BC046099 AAH46099 Q86X94
AK313223 BAG36034 B2R837
AK314194 BAG36873 Q86X94
AK304520 BAG65324 B4E312
X98893 CAA67398 Q92804

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TAF15 NP_631961 M.musculus Taf15 70439 Gene Info NP_081703 95
R.norvegicus Taf15 287571   XP_237792 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)


If you have any questions, comments, or need information about CGAP, please contact the NCI CGAP Help Desk.