CGAP       the Cancer Genome Anatomy Project
    CGAP HOW TO GenesChromosomesTissuesSAGEPathwaysTools  

Genes

Gene Tools

SNP Tools

Transcriptome Analysis

CGAP Data

Purchase CGAP Reagents

Related Links

Quick Links:

NCI Logo


Gene Info

Gene Information For:Hs. -, H3 histone, family 3B (H3.3B)
Sequence ID:NM_005324

Database Links

UniGeneEntrez GeneOMIMSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 71285115 - 71287435

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2959756Full LengthBC006497H3 histone, family 3B (H3.3B)
2959756Full LengthBC012813H3 histone, family 3B (H3.3B)
2988279Full LengthBC001124H3 histone, family 3B (H3.3B)
3910031Full LengthBC017558H3 histone, family 3B (H3.3B)
6144255Full LengthBC108701H3 histone, family 3B (H3.3B)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005315  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_005324 NP_005315 P84243 Histone

Related Sequences

 
mRNAGenPeptSwissProt
AF218029 AAG17271 P84243
BC001124 AAH01124 P84243
BC006497 AAH06497 P84243
BC012813 AAH12813 P84243
BC017558 AAH17558 P84243
BC081560 AAH81560 P84243
BC108701 AAI08702 P84243
EU446957 ABZ92486  
AK312762 BAG35628 B2R6Y1
AK304607 BAG65392 B4E380
BX537379 CAD97621 P84243
AM393192 CAL38070  

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens H3F3B NP_005315 M.musculus H3f3b 15081 Gene Info NP_032237 100
R.norvegicus H3f3b 117056   NP_446437 100
A.thaliana AT5G65350 836660   NP_201338 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)


If you have any questions, comments, or need information about CGAP, please contact the NCI CGAP Help Desk.