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Gene Info

Gene Information For:Hs. HLA-DPB1, Major histocompatibility complex, class II, DP beta 1
Sequence ID:NM_002121

Database Links

UniGeneEntrez GeneCGWBOMIMDTPSNPViewerAssembliesSNP500CancerRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 33151764 - 33162522

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4309717Full LengthBC007963major histocompatibility complex, class II, DP beta 1
4341117Full LengthBC013184major histocompatibility complex, class II, DP beta 1
4851472Full LengthBC015000major histocompatibility complex, class II, DP beta 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002112  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_002121 NP_002112 P04440 MHC_II_beta
C1-set

Related Sequences

 
mRNAGenPeptSwissProt
J03041 AAA35993 P04440
L29173 AAA36311 Q29670
K00409 AAA36312 P04232
K01615 AAA36313 P01916
M28200 AAA53195 Q30059
M28201 AAA53196 Q30060
M28202 AAA53197 P04440
M21886 AAA59739 Q30030
M83664 AAA59837 Q30174
M57466 AAA63221 Q30058
BC007963 AAH07963 Q95HC1
BC013184 AAH13184 Q30174
BC015000 AAH15000 Q95HA4
BT019780 AAV38583 Q30174
AY656678 AAV71025 Q5SQ73
AY656679 AAV71026 Q5ISH5
AY656680 AAV71027 Q5ISH4
AY804132 AAW78737 Q5EP56
AY804133 AAW78738 Q30174
AY804134 AAW78739 P13763
Q5EP54
AY804135 AAW78740 Q5EP53
AY804136 AAW78741 Q5EP52
P04440
AY804137 AAW78742 Q5EP51
AY804138 AAW78743 Q5ISH5
AY804139 AAW78744 Q5EP49
AY804140 AAW78745 Q5EP48
AY804141 AAW78746 Q5EP47
AY804142 AAW78747 Q5EP46
AY804143 AAW78748 Q30174
AY831401 AAW80919 Q5ENE1
AY831402 AAW80920 Q5ENE0
AY831403 AAW80921 Q5ISH4
AY831404 AAW80922 Q5SQ73
DQ284441 ABC66207 Q5EP54
DQ891050 ABM81976  
DQ894229 ABM85155  
AK313305 BAG36110 Q5EP52
X00532 CAA25210 Q14465
X01426 CAA25672 P13763
Q5EP54
X03067 CAA26871 P13763
Q5EP54

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

Kegg Pathways
Pathway information courtesy of Kegg


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