CGAP       the Cancer Genome Anatomy Project
    CGAP HOW TO GenesChromosomesTissuesSAGEPathwaysTools  

Genes

Gene Tools

SNP Tools

Transcriptome Analysis

CGAP Data

Purchase CGAP Reagents

Related Links

Quick Links:

NCI Logo


Gene Info

Gene Information For:Hs. EEF1D, Eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
Sequence ID:NM_032378
NM_001130054
NM_001130053
NM_001130055
NM_001960
NM_001130057
NM_001130056

Database Links

UniGeneEntrez GeneOMIMDTPSNPViewerAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 144733040 - 144750687

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4129368Full LengthBC007847eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
3349601IncompleteBC000678eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
5470872IncompleteBC071840eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001951  NP_115754  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_001130053 NP_001123525    
NM_001130054 NP_001123526    
NM_001130055 NP_001123527    
NM_001130056 NP_001123528    
NM_001130057 NP_001123529    
NM_001960 NP_001951 P29692 EF1_GNE
NM_032378 NP_115754   EF1_GNE

Related Sequences

 
mRNAGenPeptSwissProt
BC000678 AAH00678 Q9BW34
BC007847 AAH07847 Q96I38
BC009907 AAH09907 P29692
BC012819 AAH12819 P29692
BC062535 AAH62535 P29692
BC094806 AAH94806 Q4VBZ6
BT007242 AAP35906 Q96I38
AF370363 AAQ15199 Q71RH4
AK024550 BAB14925 Q9H7G6
AK314311 BAG36963 B2RAR6
AK293339 BAG56855 B4DDU4
Z21507 CAA79716 P29692

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EEF1D NP_115754 R.norvegicus Eef1d 300033   NP_001013122 87
M.musculus Eef1d 66656 Gene Info NP_083939 85
D.melanogaster eEF1delta 34363   NP_609361 56
A.gambiae AgaP_AGAP004235 1274080   XP_313149 52
C.elegans Y41E3.10 178419   NP_502816 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)


If you have any questions, comments, or need information about CGAP, please contact the NCI CGAP Help Desk.