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Gene Info

Gene Information For:Hs. SBDS, Shwachman-Bodian-Diamond syndrome
Sequence ID:NM_016038

Database Links

UniGeneEntrez GeneOMIMSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7q11.21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 66090762 - 66098009

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6202199Full LengthBC065700Shwachman-Bodian-Diamond syndrome

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057122  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_016038 NP_057122 Q9Y3A5 SBDS
NM_018264 NP_060734 Q9NV66 Flavodoxin_1
Radical_SAM
Wyosine_form

Related Sequences

 
mRNAGenPeptSwissProt
AF151855 AAD34092 Q9Y3A5
BC015591 AAH15591 Q9NV66
BC042156 AAH42156 Q9NV66
BC051888 AAH51888 Q9NV66
BC065700 AAH65700 Q9Y3A5
AY169963 AAN77490 Q9Y3A5
AK001762 BAA91891 Q9NV66
AK001779 BAA91905 Q9Y3A5
AK022917 BAB14307 Q9NV66
AK289609 BAF82298 A8K0P4
AK301330 BAG62878 B4DW16

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SBDS NP_057122 M.musculus Sbds 66711 Gene Info NP_075737 97
R.norvegicus Sbds 288615   NP_001008290 97
A.gambiae AgaP_AGAP007882 3291609   XP_317609 68
D.melanogaster CG8549 38749   NP_648057 60
C.elegans W06E11.4 175218   NP_497226 57
A.thaliana AT1G43860 840982   NP_564488 52
S.pombe SPAC4F8.03 2543459   NP_593869 51
N.crassa NCU00476.1 2704134   XP_322562 50
M.grisea MGG_05662 2676018   XP_360288 46
P.falciparum PF14_0107 811688   XP_001348280 46
S.cerevisiae SDO1 850709   NP_013122 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)


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