CGAP       the Cancer Genome Anatomy Project
    CGAP HOW TO GenesChromosomesTissuesSAGEPathwaysTools  
SAGE

Human SAGE Genie Tools

Mouse SAGE Genie Tools

Digital Karyotyping

Related Links

Quick Links:

NCI Logo

Best Gene for Tag

Search query:

TagFreq.Digital NorthernSAGE Anatomic Viewer²
GTTCGTGCCAAATTCCG 123969 DN
Best Gene for Tag

Gene
Symbol
NameDatabaseRankVirtual Tag Classification¹AccessionLT
Viewer
Gene Info
RPL35A Ribosomal protein L35a refseq_p5s 89.5% reliable 3' end NM_000996 LTV Gene Info

View all tags for gene

Other Gene(s) for Tag

Gene
Symbol
NameDatabaseRankVirtual Tag Classification¹AccessionLT
Viewer
Gene Info
    refseq_sr 83.8% reliable 3' end NM_001013719 LTV  
Hs.657338 CDNA FLJ31091 fis, clone IMR321000155, highly similar to 60S RIBOSOMAL PROTEIN L35A fl_sr 83.0% reliable 3' end AK055653 LTV Gene Info
    fl_sr 83.0% reliable 3' end AK092633 LTV  
Hs.632881 CDNA FLJ41348 fis, clone BRAWH2011762, highly similar to 60S RIBOSOMAL PROTEIN L35A fl_sr 83.0% reliable 3' end AK123342 LTV Gene Info

Legend
¹ Position of virtual tag relative to the longest reliable sequence in database
²
Tissues only

Cell lines only

Tissues + Cell lines
* Tag maps to other gene(s)
# Highly repetitive tag


If you have any questions, comments, or need information about CGAP, please contact the NCI CGAP Help Desk.