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Gene Info

Gene Information For:Hs. COPZ1, Coatomer protein complex, subunit zeta 1
Sequence ID:NM_016057

Database Links

UniGeneEntrez GeneDTPSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13.2-q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 53005193 - 53030922

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3637869Full LengthBC002849coatomer protein complex, subunit zeta 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057141  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_016057 NP_057141 P61923 Clat_adaptor_s

Related Sequences

 
mRNAGenPeptSwissProt
AF151878 AAD34115 P61923
AF161529 AAF29144 P61923
BC002849 AAH02849 P61923
AF086911 AAP97141 P61923
AB047848 BAB17659 P61923
AK223188 BAD96908 Q53FU3
AK293377 BAG56889 B4DDX8
AK295325 BAG58302 B4DHZ0

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens COPZ1 NP_057141 M.musculus Copz1 56447 Gene Info NP_062791 100
R.norvegicus Copz1 315345   XP_235705 100
D.melanogaster zetaCOP 39862   NP_648910 64
A.gambiae AgaP_AGAP006522 1277120   XP_316555 63
C.elegans F59E10.3 174675   NP_496338 57
A.thaliana AT4G08520 826411   NP_567337 46
M.grisea MGG_09294 2680172   XP_364449 45
S.cerevisiae RET3 856097   NP_015315 44
S.pombe ret3 2539522   NP_588434 44
N.crassa NCU02538.1 2713561   XP_331737 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)


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