CGAP       the Cancer Genome Anatomy Project
    CGAP HOW TO GenesChromosomesTissuesSAGEPathwaysTools  

Genes

Gene Tools

SNP Tools

Transcriptome Analysis

CGAP Data

Purchase CGAP Reagents

Related Links

Quick Links:

NCI Logo


Gene Info

Gene Information For:Hs. SH3GL1, SH3-domain GRB2-like 1
Sequence ID:NM_003025

Database Links

UniGeneEntrez GeneOMIMSNPViewerAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 4311367 - 4351415

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3458016Full LengthBC001270SH3-domain GRB2-like 1
30561140Full LengthBC098565SH3-domain GRB2-like 1
3505990IncompleteBC014387SH3-domain GRB2-like 1
3506791IncompleteBC001094SH3-domain GRB2-like 1
3509447IncompleteBC000089SH3-domain GRB2-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003016  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_003025 NP_003016 Q99961
Q6FGM0
SH3_1
BAR

Related Sequences

 
mRNAGenPeptSwissProt
U65999 AAB86800 Q99961
Q6FGM0
BC000089 AAH00089 Q9BWP4
BC001094 AAH01094 Q9BVL7
BC001270 AAH01270 Q99961
Q6FGM0
BC014387 AAH14387 Q9BVL7
BC098565 AAH98565 Q99961
Q6FGM0
AY364240 AAQ76799 Q99961
Q6FGM0
DQ891258 ABM82184  
DQ894444 ABM85370  
AK315450 BAG37838 Q6FGM0
AK299166 BAG61213 B4DRA1
X99656 CAA67970 Q99961
Q6FGM0
CR542087 CAG46884 Q99961
Q6FGM0

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SH3GL1 NP_003016 M.musculus Sh3gl1 20405 Gene Info NP_038692 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)


If you have any questions, comments, or need information about CGAP, please contact the NCI CGAP Help Desk.