CGAP       the Cancer Genome Anatomy Project
    CGAP HOW TO GenesChromosomesTissuesSAGEPathwaysTools  

Genes

Gene Tools

SNP Tools

Transcriptome Analysis

CGAP Data

Purchase CGAP Reagents

Related Links

Quick Links:

NCI Logo


Gene Info

Gene Information For:Hs. CCDC72, Coiled-coil domain containing 72
Sequence ID:NM_015933

Database Links

UniGeneEntrez GeneSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 48456673 - 48460440

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4875991Full LengthBC080531coiled-coil domain containing 72
2823852IncompleteBC001102coiled-coil domain containing 72

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam Motifs
NM_015933 NP_057017 Q9Y2S6  

Related Sequences

 
mRNAGenPeptSwissProt
AF077202 AAD26997 Q9Y2S6
AF161448 AAF29008 Q9Y2S6
BC080531 AAH80531 Q9Y2S6
AY508979 AAR87665 Q9Y2S6
AY794023 AAV40981 Q9Y2S6
DQ895956 ABM86882  
EU176382 ABW03833  

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCDC72 NP_057017 M.musculus OTTMUSG00000021761 100041098   XP_001476855 100
M.musculus Ccdc72 66167 Gene Info NP_899073 100
R.norvegicus Ccdc72 679747   XP_001055910 100
D.melanogaster CG16824 5740834   NP_001097158 73


If you have any questions, comments, or need information about CGAP, please contact the NCI CGAP Help Desk.