| | This journal provides immediate access to some articles. Perspective Riboswitch effectors as protein enzyme cofactors Jesse C. Cochrane and Scott A. Strobel PMCID: PMC2390802 Book Review
Ribozymes and RNA Catalysis, edited by David M. Lilly and Fritz Eckstein. 2007. RSC Publishing, Cambridge, UK. ISBN (online): 978-1-84755-798-8, ISBN (print): 978-0-85404-253-1. Mike Harris PMCID: PMC2390799 Letter to the Editor Organization and transcriptional output of a novel mRNA-like piRNA gene (mpiR) located on mouse chromosome 10 Minjung Kim, Bhavita Patel, Kourtney E. Schroeder, Abbas Raza, and Jeff Dejong PMCID: PMC2390792 Bioinformatics miRDB: A microRNA target prediction and functional annotation database with a wiki interface Xiaowei Wang PMCID: PMC2390791 Report Potassium ions modulate a G-quadruplex-ribozyme's activity Jean-Denis Beaudoin and Jean-Pierre Perreault PMCID: PMC2390810 Articles A viral RNA competitively inhibits the antiviral endoribonuclease domain of RNase L Hannah L. Townsend, Babal K. Jha, Jian-Qiu Han, N. Karl Maluf, Robert H. Silverman, and David J. Barton PMCID: PMC2390801 Selection and characterization of anti-NF-κB p65 RNA aptamers Susan E. Wurster and L. James Maher, III PMCID: PMC2390809 A conserved element that stabilizes the group II intron active site Olga Fedorova and Anna Marie Pyle PMCID: PMC2390790 The RNase E/G-type endoribonuclease of higher plants is located in the chloroplast and cleaves RNA similarly to the E. coli enzyme Aleks Schein, Sharon Sheffy-Levin, Fabian Glaser, and Gadi Schuster PMCID: PMC2390796 gRNA/pre-mRNA annealing and RNA chaperone activities of RBP16 Michelle L. Ammerman, John C. Fisk, and Laurie K. Read PMCID: PMC2390797 Proximity-dependent and proximity-independent trans-splicing in mammalian cells Kristi D. Viles and Bruce A. Sullenger PMCID: PMC2390811 Analysis of genomic tRNA sets from Bacteria, Archaea, and Eukarya points to anticodon–codon hydrogen bonds as a major determinant of tRNA compositional variations Ilia Targanski and Vera Cherkasova PMCID: PMC2390787 Specificity of ADAR-mediated RNA editing in newly identified targets Eva M. Riedmann, Sandy Schopoff, Jochen C. Hartner, and Michael F. Jantsch PMCID: PMC2390793 Synthesis and characterization of mRNA cap analogs containing phosphorothioate substitutions that bind tightly to eIF4E and are resistant to the decapping pyrophosphatase DcpS Joanna Kowalska, Magdalena Lewdorowicz, Joanna Zuberek, Ewa Grudzien-Nogalska, Elzbieta Bojarska, Janusz Stepinski, Robert E. Rhoads, Edward Darzynkiewicz, Richard E. Davis, and Jacek Jemielity PMCID: PMC2390807 DcpS scavenger decapping enzyme can modulate pre-mRNA splicing Vincent Shen, Hudan Liu, Shin-Wu Liu, Xinfu Jiao, and Megerditch Kiledjian PMCID: PMC2390800 The 5e motif of eukaryotic signal recognition particle RNA contains a conserved adenosine for the binding of SRP72 Elena Iakhiaeva, Jacek Wower, Iwona K. Wower, and Christian Zwieb PMCID: PMC2390789 Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G Shin Miyakawa, Yusuke Nomura, Taiichi Sakamoto, Yoshiki Yamaguchi, Koichi Kato, Satoko Yamazaki, and Yoshikazu Nakamura PMCID: PMC2390795 Ab initio RNA folding by discrete molecular dynamics: From structure prediction to folding mechanisms Feng Ding, Shantanu Sharma, Poornima Chalasani, Vadim V. Demidov, Natalia E. Broude, and Nikolay V. Dokholyan PMCID: PMC2390798 The PIWI proteins SMEDWI-2 and SMEDWI-3 are required for stem cell function and piRNA expression in planarians Dasaradhi Palakodeti, Magda Smielewska, Yi-Chien Lu, Gene W. Yeo, and Brenton R. Graveley PMCID: PMC2390803
Trypanosoma brucei RNA editing protein TbMP42 (band VI) is crucial for the endonucleolytic cleavages but not the subsequent steps of U-deletion and U-insertion Julie A. Law, Sean F. O'Hearn, and Barbara Sollner-Webb PMCID: PMC2390806 Nucleoside modifications modulate activation of the protein kinase PKR in an RNA structure-specific manner Subba Rao Nallagatla and Philip C. Bevilacqua PMCID: PMC2390794 Competition between the Rex1 exonuclease and the La protein affects both Trf4p-mediated RNA quality control and pre-tRNA maturation Laura A. Copela, Cesar F. Fernandez, R. Lynn Sherrer, and Sandra L. Wolin PMCID: PMC2390804 Single-stranded RNA facilitates nucleocapsid: APOBEC3G complex formation Hal P. Bogerd and Bryan R. Cullen PMCID: PMC2390788
RNase P cleaves the adenine riboswitch and stabilizes pbuE mRNA in Bacillus subtilis Elias Seif and Sidney Altman PMCID: PMC2390808 Method A multifunctional human Argonaute2-specific monoclonal antibody Sabine Rüdel, Andrew Flatley, Lasse Weinmann, Elisabeth Kremmer, and Gunter Meister PMCID: PMC2390805 |
