Burd CJ, Kinyamu HK, Miller FW, Archer TK. UV radiation regulates Mi-2 through protein translation and stability. The Journal of biological chemistry 2008 283(50):34976-34982. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=18922793)
Kinyamu HK, Collins JB, Grissom SF, Hebbar PB, Archer TK. Genome wide transcriptional profiling in breast cancer cells reveals distinct changes in hormone receptor target genes and chromatin modifying enzymes after proteasome inhibition. Molecular carcinogenesis 2008 47(11):845-885. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=18381591)
Wang Y, Yabuuchi A, McKinney-Freeman S, Ducharme DMK, Ray M, Chawengsaksophak K, Archer TK, Daley GQ. The intrinsic requirement of Cdx-Hox pathway during embryonic hematopoiesis in mouse. Proceedings of the National Academy of Sciences of the United States of America 2008 105(22):7756-7761. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=18511567)
Aoyagi S, Archer TK. Dynamics of coactivator recruitment and chromatin modifications during nuclear receptor mediated transcription. Molecular and cellular endocrinology 2008 280(1-2):1-5. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=17935877)
Hebbar PB, Archer TK. Altered histone H1 stoichiometry and an absence of nucleosome positioning on transfected DNA. The Journal of biological chemistry 2008 283(8):4595-4601. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=18156629)
Trotter KT, Fan H, Ivey ML, Kingston RE, Archer TK. The HSA domain of BRG1 mediates critical interactions required for glucocorticoid receptor-dependent transcriptional activation in vivo. Molecular and cellular biology 2008 28(4):1413-1426. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=18086889)
Jefferson WN, Archer TK. Intersection of nuclear receptors and the proteasome on the epigenetic landscape. Environmental and molecular mutagenesis 2008 49(1):83-95. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=18095329)
Aoyagi S, Archer TK. Nicotinamide uncouples hormone-dependent chromatin remodeling from transcription complex assembly. Molecular and cellular biology 2008 28(1):30-39. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=17954562)
Burkhart BA, Kennett SB, Archer TK. Osmotic stress-dependent repression is mediated by histone H3 phosphorylation and chromatin structure. The Journal of biological chemistry 2007 282(7):4400-4407. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=17158874)
Trotter KW, Archer TK. Nuclear receptors and chromatin remodeling machinery. Molecular and cellular endocrinology 2007 265-266:162-7. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=17240047)
Hebbar PB, Archer TK. Chromatin-dependent cooperativity between site-specific transcription factors in vivo. The Journal of biological chemistry 2007 282(11):8284-8291. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=17186943)
Hebbar PB, Archer TK. Chromatin-dependent cooperativity between site-specific transcription factors in vivo. J Biol Chem. 2007 Mar 16;282(11):8284-91. Epub 2006 Dec 23. PMID: 17186943. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?itool=pubmed_DocSum&db=pubmed&cmd=Display&dopt=pubmed_pubmed&from_uid=17186943)
Burkhart BA, Kennett SB, Archer TK. Osmotic stress-dependent repression is mediated by histone H3 phosphorylation and chromatin structure. J Biol Chem. 2007 Feb 16;282(7):4400-7. Epub 2006 Dec 11. PMID: 17158874. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?itool=pubmed_DocSum&db=pubmed&cmd=Display&dopt=pubmed_pubmed&from_uid=17158874)
Wade PA, Archer TK. Epigenetics: environmental instructions for the genome. Environ Health Perspect. 2006 Mar;114(3):A140-1. PMID: 16507439. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?itool=pubmed_DocSum&db=pubmed&cmd=Display&dopt=pubmed_pubmed&from_uid=16507439)
Bhattacharjee RN, Archer TK. Transcriptional silencing of the mouse mammary tumor virus promoter through chromatin remodeling is concomitant with histone H1 phosphorylation and histone H3 hyperphosphorylation at M phase. Virology. 2006 Mar 1;346(1):1-6. Epub 2006 Feb 3. PMID: 16458342. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?itool=pubmed_DocSum&db=pubmed&cmd=Display&dopt=pubmed_pubmed&from_uid=16458342)
Chen J, Kinyamu HK, Archer TK. Changes in Attitude, Changes in Latitude: Nuclear Receptors Remodeling Chromatin to Regulate Transcription. Mol. Endocrinol. 20: 1-13, 2006. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=16002433&query_hl=2)
Kinyamu HK, Chen J, Archer TK. Linking the ubiquitin-proteasome pathway to chromatin remodeling/modification by nuclear receptors. J. Mol. Endocrinol. 34: 281-97, 2005. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15821097&query_hl=4)
Fan HY, Trotter KW, Archer TK, Kingston RE. Swapping function of two chromatin remodeling complexes. Mol. Cell 17: 805-15, 2005. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15780937&query_hl=6)
Aoyagi S, Trotter KW, Archer TK. ATP-dependent chromatin remodeling complexes and their role in nuclear receptor-dependent transcription in vivo. Vitam. Horm. 70: 281-307, 2005. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15727808&query_hl=8)
Butcher DT, Mancini-DiNardo DN, Archer TK, Rodenhiser DI. DNA binding sites for putative methylation boundaries in the unmethylated region of the BRCA1 promoter. Int. J. Cancer 111:669-78, 2004. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=15252835&query_hl=2&itool=pubmed_docsum)
Trotter KW, Archer TK. Reconstitution of glucocorticoid receptor-dependent transcription in vivo. Mol. Cell Biol. 24: 3347-58, 2004. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15060156&query_hl=24)
Deterding LJ, Banks GC, Tomer KB, Archer TK. Understanding global changes in histone H1 phosphorylation using mass spectrometry. Methods 33: 53-8, 2004. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15039087&query_hl=22)
Hsiao PW, Fryer CJ, Trotter KW, Wang W, Archer TK.: BAF60a mediates critical interactions between nuclear receptors and the BRG1 chromatin-remodeling complex for transactivation. Mol. Cell Biol. 23: 6210-20, 2003. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12917342&query_hl=18)
Kinyamu HK, Archer TK. Estrogen receptor-dependent proteasomal degradation of the glucocorticoid receptor is coupled to an increase in mdm2 protein expression. Mol. Cell Biol. 23: 5867-81, 2003. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12897156&query_hl=16)
Xing, W. and Archer, T.K.: Upstream stimulatory factors mediate estrogen receptor activity of the cathepsin promoter. Mol. Endo. 12:1310-1321, 1998. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=9731700&query_hl=8)
Hsiao, P-W., Deroo, B.J. and Archer, T.K.: Chromatin remodeling and tissue-selective responses of nuclear hormone receptors. Biochem. Cell Biol. 80: 343-351, 2002. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12123287&query_hl=2)
Deroo BJ, Archer TK. Differential activation of the IkBa and mouse mammary tumor virus promoters by progesterone and glucocorticoid receptors. J. Steroid Biochem. Mol. Biol. 81: 309-17, 2002. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12361720&query_hl=75)
Fryer CJ, Archer TK. Analyzing the contributions of chromatin structure in nuclear hormone receptor activated transcription in vivo. Methods In Molecular Biology: Steroid Receptor Methods (Lieberman B, Ed.) 176: 283-96, 2001. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=11554329&query_hl=10)
Deroo, B.J. and Archer, T.K.: Glucocorticoid receptor-mediated chromatin remodeling in vivo. Oncogene 20:3039-3046, 2001. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=11420719&query_hl=14)
Bhattacharjee, R,N., Banks, G.C., Trotter, K.W., Lee, H-L and Archer, T.K.: Histone H1 phosphorylation by Cdk2 selectively modulates MMTV transcription through chromatin remodeling. Mol. Cell. Biol. 21: 5417-25, 2001. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=11463824&query_hl=44)
DiNardo DN, Butcher DT, Robinson DP, Archer TK, Rodenhiser DI. Functional analysis of CpG methylation in the BRCA1 promoter region. Oncogene 20: 5331-40, 2001. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=11536045&query_hl=48)
Fryer, C.J. and Archer, T.K.: Analyzing the Contributions of Chromatin Structure in Nuclear Hormone Receptor Activated Transcription in Vivo. Methods In Molecular Biology: Steroid Receptor Methods (Lieberman B, Ed.) 176: 283-296, 2001. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=11554329&query_hl=10)
Deroo BJ, Archer TK. Glucocorticoid receptor activation of the IkBa promoter within chromatin. Mol. Biol. Cell 12: 3365-74, 2001.
Fryer CJ, Kinyamu HK, Rogatsky I, Garabedian MJ, Archer TK. Selective activation of the glucocorticoid receptor by steroid antagonists in human breast cancer and osteosarcoma cells. J. Biol. Chem. 275: 17771-7, 2000. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=10751396&query_hl=24)
Kinyamu HK, Fryer CJ, Horwitz KB, Archer TK. The MMTV promoter adopts distinct chromatin structures in human breast cancer cells with and without glucocorticoid receptor. J. Biol. Chem. 275: 20061-8, 2000. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=10751396&query_hl=24)
Nie Z, Xue Y, Yang D, Zhou S, Deroo BJ, Archer TK, Weidong W. A specificity and targeting subunit of a human SWI/SNF-related chromatin-remodelling complex. Mol. Cell. Biol. 20: 8879-88, 2000. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=11073988&query_hl=12)
Mancini DN, Singh SM, Archer TK, Rodenhiser D. Site-specific DNA methylation in the neurofibromatosis (NF1) promoter interferes with binding of CREB and SP1 transcription factors. Oncogene 18: 4108-19, 1999. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=10435592&query_hl=11)
Archer TK, Ricci AR. Exonuclease III as a probe of chromatin structure in vivo. Methods Enzymol. 304:584-99, 1999.
Darnel AD, Archer TK, Yang K. Regulation of 11-beta-hydroxysteroid dehydrogenase type 2 by steroid hormones and epidermal growth factor in the Ishikawa human endometrial cell line. J. Steroid Biochem. Mol Biol. 70:203-10, 1999. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=10622409&query_hl=20)
Fryer CJ, Nordeen SK, Archer TK. Antiprogestins mediate differential effects on glucocorticoid receptor remodeling of chromatin structure. J. Biol. Chem. 273:1175-83, 1998. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=9422784&query_hl=31)
Watson CE, Archer TK. Chromatin and steroid-receptor-mediated transcription. in: Molecular Biology of Steroid and Nuclear Hormone Receptors. (Freedman, L.P. ed), Ch. 8, Pg. 209-35, Birkhser, Boston, 1998.
Lee H-L, Archer TK. Prolonged glucocorticoid exposure dephosphorylates histone H1 and inactivates the MMTV promoter. EMBO J. 17:1454-66, 1998. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=9482742&query_hl=1)
Mancini DN, Rodenhiser DI, Ainsworth PJ, O'Malley FP, Singh SM, Xing W, Archer TK. CpG methylation within the 5' regulatory region of the BRCA1 gene is tumor specific and includes a putative CREB binding site. Oncogene 16:1161-69, 1998. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=9528858&query_hl=3)
Fryer CJ, Archer TK. Chromatin remodelling of the glucocorticoid receptor requires the BRG1 complex. Nature 393:81-91, 1998. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=9590696&query_hl=5)
Xing W, Archer TK. Upstream stimulatory factors mediate estrogen receptor activity of the cathepsin promoter. Mol. Endocrinol. 12:1310-21, 1998. [Abstract](http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=9731700&query_hl=8)