All thematic series
Thematic Series
Bovine: the companion papers for the publication of the bovine genome sequence
The cow (Bos taurus) is an important model organism for biomedical research and development, in addition to being agriculturally important. This special series of companion papers includes work from both the Bovine Genome Sequencing and Analysis Consortium and the Bovine HapMap Consortium. Research
   Whole genome sequencing of a single Bos taurus animal for single nucleotide polymorphism discovery
Sebastian H Eck, Anna Benet-Pag s, Krzysztof Flisikowski, Thomas Meitinger, Ruedi Fries, Tim M Strom
Genome Biology 2009, 10:R82 (6August2009)
[Abstract] [Provisional PDF] [PubMed] [Related articles]Research article
Characterization of the prohormone complement in cattle using genomic libraries and cleavage prediction approaches
Bruce R Southey, Sandra L Rodriguez-Zas, Jonathan V Sweedler
BMC Genomics 2009, 10:228 (16May2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Research article
Bos taurus genome sequence reveals the assortment of immunoglobulin and surrogate light chain genes in domestic cattle
Anna Ekman, Mikael Niku, Jenni Liljavirta, Antti Iivanainen
BMC Immunology 2009, 10:22 (30April2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Commentary
Unlocking the bovine genome
Ross L Tellam, Danielle G Lemay, Curtis P Van Tassell, Harris A Lewin, Kim C Worley, Christine G Elsik
BMC Genomics 2009, 10:193 (24April2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Research article
Genomic analysis reveals extensive gene duplication within the bovine TRB locus
Timothy Connelley, Jan Aerts, Andy Law, W Ivan Morrison
BMC Genomics 2009, 10:192 (24April2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Research article
Genomic organization and classification of the bovine WC1 genes and expression by peripheral blood gamma delta T cells
Carolyn TA Herzig, Cynthia L Baldwin
BMC Genomics 2009, 10:191 (24April2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Research article
Transcriptional reprogramming of gene expression in bovine somatic cell chromatin transfer embryos
Nelida Rodriguez-Osorio, Zhongde Wang, Poothappillai Kasinathan, Grier P Page, James M Robl, Erdogan Memili
BMC Genomics 2009, 10:190 (24April2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Research article
Cross-species mapping of bidirectional promoters enables prediction of unannotated 5' UTRs and identification of species-specific transcripts
Helen Piontkivska, Mary Q Yang, Denis M Larkin, Harris A Lewin, James Reecy, Laura Elnitski
BMC Genomics 2009, 10:189 (24April2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Research article
Analysis of the complement and molecular evolution of tRNA genes in cow
Dave TP Tang, Evgeny A Glazov, Sean M McWilliam, Wesley C Barris, Brian P Dalrymple
BMC Genomics 2009, 10:188 (24April2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Research article
Characterization of the bovine type I IFN locus: rearrangements, expansions, and novel subfamilies
Angela M Walker, R Michael Roberts
BMC Genomics 2009, 10:187 (24April2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Research article
Novel transcripts discovered by mining genomic DNA from defined regions of bovine chromosome 6
Rosemarie Weikard, Tom Goldammer, Annett Eberlein, Christa Kuehn
BMC Genomics 2009, 10:186 (24April2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Research article
Characterization of the bovine pregnancy-associated glycoprotein gene family  analysis of gene sequences, regulatory regions within the promoter and expression of selected genes
Bhanu Prakash VL Telugu, Angela M Walker, Jonathan A Green
BMC Genomics 2009, 10:185 (24April2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Research article
QTL global meta-analysis: are trait determining genes clustered?
Hanni Salih, David L Adelson
BMC Genomics 2009, 10:184 (24April2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Research article
Functional genomics of HMGN3a and SMARCAL1 in early mammalian embryogenesis
Alper Uzun, Nelida Rodriguez-Osorio, Abdullah Kaya, Hongfeng Wang, John J Parrish, Valentin A Ilyin, Erdogan Memili
BMC Genomics 2009, 10:183 (24April2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Research article
A high resolution RH map of the bovine major histocompatibility complex
Candice L Brinkmeyer-Langford, Christopher P Childers, Krista L Fritz, Ashley L Gustafson-Seabury, Marian Cothran, Terje Raudsepp, James E Womack, Loren C Skow
BMC Genomics 2009, 10:182 (24April2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Research article
Gene synteny comparisons between different vertebrates provide new insights into breakage and fusion events during mammalian karyotype evolution
Claus Kemkemer, Matthias Kohn, David N Cooper, Lutz Froenicke, Josef H gel, Horst Hameister, Hildegard Kehrer-Sawatzki
BMC Evolutionary Biology 2009, 9:84 (24April2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Research article
High-resolution haplotype block structure in the cattle genome
Rafael Villa-Angulo, Lakshmi K Matukumalli, Clare A Gill, Jungwoo Choi, Curtis P Van Tassell, John J Grefenstette
BMC Genetics 2009, 10:19 (24April2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Research article
An examination of positive selection and changing effective population size in Angus and Holstein cattle populations (Bos taurus) using a high density SNP genotyping platform and the contribution of ancient polymorphism to genomic diversity in Domestic cattle
Sean MacEachern, Ben Hayes, John McEwan, Mike Goddard
BMC Genomics 2009, 10:181 (24April2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Research article
Bos taurus genome assembly
Yue Liu, Xiang Qin, Xing-Zhi Henry Song, Huaiyang Jiang, Yufeng Shen, K James Durbin, Sigbj rn Lien, Matthew Peter Kent, Marte Sodeland, Yanru Ren, Lan Zhang, Erica Sodergren, Paul Havlak, Kim C Worley, George M Weinstock, Richard A Gibbs
BMC Genomics 2009, 10:180 (24April2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Research article
Molecular evolution of the Bovini tribe (Bovidae, Bovinae): Is there evidence of rapid evolution or reduced selective constraint in Domestic cattle?
Sean MacEachern, John McEwan, Alan McCulloch, Andrew Mather, Keith Savin, Mike Goddard
BMC Genomics 2009, 10:179 (24April2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Research article
Genome wide signatures of positive selection: The comparison of independent samples and the identification of regions associated to traits
William Barendse, Blair E Harrison, Rowan J Bunch, Merle B Thomas, Lex B Turner
BMC Genomics 2009, 10:178 (24April2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Research article
Phylogenetic reconstruction and the identification of ancient polymorphism in the Bovini tribe (Bovidae, Bovinae)
Sean MacEachern, John McEwan, Mike Goddard
BMC Genomics 2009, 10:177 (24April2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Research article
A high density linkage map of the bovine genome
Juan A Arias, Mike Keehan, Paul Fisher, Wouter Coppieters, Richard Spelman
BMC Genetics 2009, 10:18 (24April2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Research article
Two-stage genome-wide association study identifies integrin beta 5 as having potential role in bull fertility
Jean M Feugang, Abdullah Kaya, Grier P Page, Lang Chen, Tapan Mehta, Kashif Hirani, Lynne Nazareth, Einko Topper, Richard Gibbs, Erdogan Memili
BMC Genomics 2009, 10:176 (24April2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]Research
The bovine lactation genome: insights into the evolution of mammalian milk
Danielle G Lemay, David J Lynn, William F Martin, Margaret C Neville, Theresa M Casey, Gonzalo Rincon, Evgenia V Kriventseva, Wesley C Barris, Angie S Hinrichs, Adrian J Molenaar, Katherine S Pollard, Nauman J Maqbool, Kuljeet Singh, Regan Murney, Evgeny M Zdobnov, Ross L Tellam, Juan F Medrano, J Bruce German, Monique Rijnkels
Genome Biology 2009, 10:R43 (24April2009)
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