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Northeast Fisheries Science Center Reference Document 06-15

Documentation for the Energy Modeling and Analysis eXercise (EMAX)

by Jason S. Link1, Carolyn A. Griswold2, Elizabeth T. Methratta1, and Jessie Gunnard1, Editors; with contributions from (listed alphabetically): Jon K.T. Brodziak3, Laurel A. Col1, David D. Dow1, Steven F. Edwards2, Michael J. Fogarty1, Steven A. Fromm4, John R. Green2, Carolyn A. Griswold2, Vincent G. Guida4, Donna L. Johnson4, Joseph M. Kane2, Christopher M. Legault1, Jason S. Link1, John E. O’Reilly2, William J. Overholtz1, Debra L. Palka1, William T. Stockhausen5, Joseph J. Vitaliano4, and Gordon T. Waring1

1National Marine Fisheries Service, 166 Water St., Woods Hole MA 02543
2National Marine Fisheries Service, 28 Tarzwell Drive, Narragansett RI 02882
3National Marine Fisheries Service, 2570 Dole St., Honolulu HI 96822
4National Marine Fisheries Service, 74 Magruder Rd, Highlands NJ 07732
5National Marine Fisheries Service, 7600 Sand Point Way NE, Seattle WA 98115

Print publication date August 2006; web version posted August 10, 2006

Citation: Link JS, Griswold CA, Methratta ET, Gunnard J, Editors. 2006. Documentation for the Energy Modeling and Analysis eXercise (EMAX). US Dep. Commer., Northeast Fish. Sci. Cent. Ref. Doc. 06-15; 166 p.

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EMAX Group membership (listed alphabetically): Jon K.T. Brodziak, Laurel A. Col, David D. Dow, Steven F. Edwards, Michael J. Fogarty, Steven A. Fromm, Ronald Goldberg, John R. Green, Carolyn A. Griswold, Vincent G. Guida, Jack W. Jossi, Joseph M. Kane, Nancy E. Kohler, Christopher M. Legault, Jason S. Link, Cami McCandless, Clyde L. MacKenzie Jr., Elizabeth T. Methratta, David G. Mountain, John E. O’Reilly, William J. Overholtz, Debra L. Palka, Tim D. Smith, William T. Stockhausen, Joseph J. Vitaliano, and Gordon T. Waring
TABLE OF CONTENTS
Abstract List of Acronyms
Preface 1. Introduction
Biomass Estimates
2. Phytoplankton and Primary Production 11. Shrimp and Similar Species
3. Bacteria 12. Larval and Juvenile Fish
4. Microzooplankton 13. Small Pelagics and Mesopelagics
5. Copepods (large and small) 14. Demersals and Medium Pelagics
6. Gelatinous Zooplankton 15. Large Pelagics
7. Micronekton 16. Pinnipeds
8. Macrobenthos 17. Baleen Whales and Odontocetes
9. Megabenthos - Filterers 18. Seabirds
10. Megabenthos - Other 19. Detritis - Particulate Organic Carbon (POC) and Dissolved Organic Carbon (DOC)
Rate Estimates and Model Protocols
20. Fishery Removals 23. Respiration
21. Other Removals 24. Model Protocols
22. Consumption and Diet Composition Matrix
 
25. Discussion
26. EMAX Glossary
27. Appendix A – Preliminary Networks for Each Region