| | This journal provides immediate access to some articles. Editorial Large-Scale Biology Rich Jorgensen PMCID: PMC1560922 In This Issue Programmed Cell Death in Plants: A Role for Mitochondrial-Associated Hexokinases Nancy A. Eckardt PMCID: PMC1560904 In Brief Three-Dimensional Visualization of Plant Development Nancy A. Eckardt PMCID: PMC1560914 Single-Cell C4 Photosynthesis in Chenopodiaceae Species Nancy A. Eckardt PMCID: PMC1560909 Current Perspective Essays Special Series on Large-Scale Biology Unraveling the Dynamic Transcriptome Siobhan M. Brady, Terri A. Long, and Philip N. Benfey PMCID: PMC1560917 A Discussion of Statistical Methods for Design and Analysis of Microarray Experiments for Plant Scientists Dan Nettleton PMCID: PMC1560901 Research Articles Genomic and Genetic Characterization of Rice Cen3 Reveals Extensive Transcription and Evolutionary Implications of a Complex Centromere Huihuang Yan, Hidetaka Ito, Kan Nobuta, Shu Ouyang, Weiwei Jin, Shulan Tian, Cheng Lu, R.C. Venu, Guo-liang Wang, Pamela J. Green, Rod A. Wing, C. Robin Buell, Blake C. Meyers, and Jiming Jiang PMCID: PMC1560911 Discovery of Cyclotide-Like Protein Sequences in Graminaceous Crop Plants: Ancestral Precursors of Circular Proteins? Jason P. Mulvenna, Joshua S. Mylne, Rekha Bharathi, Rachel A. Burton, Neil J. Shirley, Geoffrey B. Fincher, Marilyn A. Anderson, and David J. Craik PMCID: PMC1560918 Visualizing Plant Development and Gene Expression in Three Dimensions Using Optical Projection Tomography Karen Lee, Jerome Avondo, Harris Morrison, Lilian Blot, Margaret Stark, James Sharpe, Andrew Bangham, and Enrico Coen PMCID: PMC1560903 Functional Profiling Reveals That Only a Small Number of Phytochrome-Regulated Early-Response Genes in Arabidopsis Are Necessary for Optimal Deetiolation Rajnish Khanna, Yu Shen, Gabriela Toledo-Ortiz, Elise A. Kikis, Henrik Johannesson, Yong-Sic Hwang, and Peter H. Quail PMCID: PMC1560915 GA4 Is the Active Gibberellin in the Regulation of LEAFY Transcription and Arabidopsis Floral Initiation Sven Eriksson, Henrik Böhlenius, Thomas Moritz, and Ove Nilsson PMCID: PMC1560906 Oscillatory Increases in Alkalinity Anticipate Growth and May Regulate Actin Dynamics in Pollen Tubes of Lily Alenka Lovy-Wheeler, Joseph G. Kunkel, Ellen G. Allwood, Patrick J. Hussey, and Peter K. Hepler PMCID: PMC1560910 Tobacco WLIM1 Is a Novel F-Actin Binding Protein Involved in Actin Cytoskeleton Remodeling Clément Thomas, Céline Hoffmann, Monika Dieterle, Marleen Van Troys, Christophe Ampe, and André Steinmetz PMCID: PMC1560925 The Cytoskeleton Maintains Organelle Partitioning Required for Single-Cell C4 Photosynthesis in Chenopodiaceae Species Simon D.X. Chuong, Vincent R. Franceschi, and Gerald E. Edwards PMCID: PMC1560926 The Balance between Cell Division and Endoreplication Depends on E2FC-DPB, Transcription Factors Regulated by the Ubiquitin-SCFSKP2A Pathway in Arabidopsis Juan C. del Pozo, Sara Diaz-Trivino, Nerea Cisneros, and Crisanto Gutierrez PMCID: PMC1560920 The Synechocystis sp PCC 6803 Oxa1 Homolog Is Essential for Membrane Integration of Reaction Center Precursor Protein pD1 Friedrich Ossenbühl, Masami Inaba-Sulpice, Jörg Meurer, Jürgen Soll, and Lutz A. Eichacker PMCID: PMC1560907 Tic21 Is an Essential Translocon Component for Protein Translocation across the Chloroplast Inner Envelope Membrane Yi-Shan Teng, Yi-shin Su, Lih-Jen Chen, Yong Jik Lee, Inhwan Hwang, and Hsou-min Li PMCID: PMC1560916 Arabidopsis EPSIN1 Plays an Important Role in Vacuolar Trafficking of Soluble Cargo Proteins in Plant Cells via Interactions with Clathrin, AP-1, VTI11, and VSR1 Jinhee Song, Myoung Hui Lee, Gil-Je Lee, Cheol Min Yoo, and Inhwan Hwang PMCID: PMC1560928 Overexpression of the Arabidopsis Syntaxin PEP12/SYP21 Inhibits Transport from the Prevacuolar Compartment to the Lytic Vacuole in Vivo Ombretta Foresti, Luis L.P. daSilva, and Jürgen Denecke PMCID: PMC1560924 Tung Tree DGAT1 and DGAT2 Have Nonredundant Functions in Triacylglycerol Biosynthesis and Are Localized to Different Subdomains of the Endoplasmic Reticulum Jay M. Shockey, Satinder K. Gidda, Dorselyn C. Chapital, Jui-Chang Kuan, Preetinder K. Dhanoa, John M. Bland, Steven J. Rothstein, Robert T. Mullen, and John M. Dyer PMCID: PMC1560902 Rapid Metabolism of Glucose Detected with FRET Glucose Nanosensors in Epidermal Cells and Intact Roots of Arabidopsis RNA-Silencing Mutants Karen Deuschle, Bhavna Chaudhuri, Sakiko Okumoto, Ida Lager, Sylvie Lalonde, and Wolf B. Frommer PMCID: PMC1560921 Interaction between Rice MYBGA and the Gibberellin Response Element Controls Tissue-Specific Sugar Sensitivity of α-Amylase Genes Peng-Wen Chen, Chih-Ming Chiang, Tung-Hi Tseng, and Su-May Yu PMCID: PMC1560908 Mitochondria-Associated Hexokinases Play a Role in the Control of Programmed Cell Death in Nicotiana benthamiana Moonil Kim, Jeong-Hwa Lim, Chang Sook Ahn, Kyoungsook Park, Gyung Tae Kim, Woo Taek Kim, and Hyun-Sook Pai PMCID: PMC1560927 Rice NTRC Is a High-Efficiency Redox System for Chloroplast Protection against Oxidative Damage Juan Manuel Pérez-Ruiz, María Cristina Spínola, Kerstin Kirchsteiger, Javier Moreno, Mariam Sahrawy, and Francisco Javier Cejudo PMCID: PMC1560923 Biz1, a Zinc Finger Protein Required for Plant Invasion by Ustilago maydis, Regulates the Levels of a Mitotic Cyclin Ignacio Flor-Parra, Miroslav Vranes, Jörg Kämper, and José Pérez-Martín PMCID: PMC1560913 The Clp1 Protein Is Required for Clamp Formation and Pathogenic Development of Ustilago maydis Mario Scherer, Kai Heimel, Verena Starke, and Jörg Kämper PMCID: PMC1560919 Multiple Avirulence Paralogues in Cereal Powdery Mildew Fungi May Contribute to Parasite Fitness and Defeat of Plant Resistance Christopher J. Ridout, Pari Skamnioti, Oliver Porritt, Soledad Sacristan, Jonathan D.G. Jones, and James K.M. Brown PMCID: PMC1560912 Correction Plant Cell. 2006 September; 18(9): 2415. doi: 10.1105/tpc.106.180960.PMCID: PMC1560905 Corrects: Ramanjulu Sunkar, et al. Posttranscriptional Induction of Two Cu/Zn Superoxide Dismutase Genes in Arabidopsis Is Mediated by Downregulation of miR398 and Important for Oxidative Stress Tolerance. Plant Cell. 2006 August; 18(8): 2051–2065. |
