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Volume 4;  2009
Research
Lossless filter for multiple repeats with bounded edit distance
Pierre Peterlongo, Gustavo Akio Tominaga Sacomoto, Alair Pereira do Lago, Nadia Pisanti, and Marie-France Sagot
Algorithms Mol Biol. 2009; 4: 3. Published online 2009 January 30. doi: 10.1186/1748-7188-4-3.
PMCID: PMC2661881
An image processing approach to computing distances between RNA secondary structures dot plots
Tor Ivry, Shahar Michal, Assaf Avihoo, Guillermo Sapiro, and Danny Barash
Algorithms Mol Biol. 2009; 4: 4. Published online 2009 February 9. doi: 10.1186/1748-7188-4-4.
PMCID: PMC2677394
A linear programming approach for estimating the structure of a sparse linear genetic network from transcript profiling data
Sahely Bhadra, Chiranjib Bhattacharyya, Nagasuma R Chandra, and I Saira Mian
Algorithms Mol Biol. 2009; 4: 5. Published online 2009 February 24. doi: 10.1186/1748-7188-4-5.
PMCID: PMC2654898
Software Article
CHSMiner: a GUI tool to identify chromosomal homologous segments
Zhen Wang, Guohui Ding, Zhonghao Yu, Lei Liu, and Yixue Li
Algorithms Mol Biol. 2009; 4: 2. Published online 2009 January 15. doi: 10.1186/1748-7188-4-2.
PMCID: PMC2647922
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