| | Other Issues: previous | next | latest | archiveArticles A State Profile of IT Sophistication in Nursing Homes Gregory L. Alexander PMCID: PMC2656012 Probabilistic Asthma Case Finding: A Noisy OR Reformulation Vibha Anand and Stephen M. Downs PMCID: PMC2656011 SNOMED CT Coding Variation and Grouping for “other findings” in a Longitudinal Study on Urea Cycle Disorders Timothy B. Patrick, Rachel Richesson, James E. Andrews, and Lillian C. Folk PMCID: PMC2656069 An Integrated Computerized Triage System in the Emergency Department Dominik Aronsky, Ian Jones, Bill Raines, Robin Hemphill, Scott R Mayberry, Melissa A Luther, and Ted Slusser PMCID: PMC2656061 Methodology for Creating UMLS Content Views Appropriate for Biomedical Natural Language Processing Alan R. Aronson, James G. Mork, Aurélie Névéol, Sonya E. Shooshan, and Dina Demner-Fushman PMCID: PMC2655934 A Rapid Assessment Process for Clinical Informatics Interventions Joan S. Ash, Dean F. Sittig, Carmit K. McMullen, Kenneth Guappone, Richard Dykstra, and James Carpenter PMCID: PMC2656056 Discovering Synergistic Qualities of Published Authors to Enhance Translational Research Nathan J. Bahr and Aaron M. Cohen PMCID: PMC2655954 Negative CPOE Attitudes Correlate with Diminished Power in the Workplace Christa E. Bartos, Brian S. Butler, Louis E. Penrod, Douglas B. Fridsma, and Rebecca S. Crowley PMCID: PMC2655973 A Scientific Collaboration Tool Built on the Facebook Platform Steven D. Bedrick and Dean F. Sittig PMCID: PMC2656030 Evaluating the Technical Adequacy of Electronic Prescribing Standards: Results of an Expert Panel Process Douglas S Bell, Anthony J. Schueth, John Paul Guinan, Shinyi Wu, and Jesse C. Crosson PMCID: PMC2656071 Issues in Mapping LOINC Laboratory Tests to SNOMED CT Olivier Bodenreider PMCID: PMC2655945 Development of a Reference Information Model and Knowledgebase for Electronic Bloodstream Infection Detection Tara Borlawsky, Bala Hota, Michael Y. Lin, Yosef Khan, Jeremy Young, Jennifer Santangelo, and Kurt B. Stevenson PMCID: PMC2656042 Semantic Categories and Relations for Modelling Adverse Drug Reactions Towards a Categorial Structure for Pharmacovigilance Cédric Bousquet, Béatrice Trombert, Anand Kumar, and Jean-Marie Rodrigues PMCID: PMC2656068 Identification of Inactive Medications in Narrative Medical Text Eugene M. Breydo, Julia T. Chu, and Alexander Turchin PMCID: PMC2655977 eQuality for All: Extending Automated Quality Measurement of Free Text Clinical Narratives Steven H Brown, Peter L Elkin, S Trent Rosenbloom, Elliot Fielstein, and Ted Speroff PMCID: PMC2656015 Predicting Outbreak Detection in Public Health Surveillance: Quantitative Analysis to Enable Evidence-Based Method Selection David L. Buckeridge, Anna Okhmatovskaia, Samson Tu, Martin O’Connor, Csongor Nyulas, and Mark A. Musen PMCID: PMC2656053 Using regular expressions to extract information on pacemaker implantation procedures from clinical reports Arnaud Rosier, Anita Burgun, and Philippe Mabo PMCID: PMC2656039 Medication and Indication Linkage: A Practical Therapy for the Problem List? Matthew M. Burton, Linas Simonaitis, and Gunther Schadow PMCID: PMC2655999 Variable-length Positional Modeling for Biological Sequence Classification Andigoni Malousi, Ioanna Chouvarda, Vassilis Koutkias, Sofia Kouidou, and Nicos Maglaveras PMCID: PMC2656059 Automatically Extracting Information Needs from Ad Hoc Clinical Questions Hong Yu and Yong-gang Cao PMCID: PMC2655957 Selecting data elements to build a patient-centric electronic health record that will support adherence to Therapeutic Lifestyle Change Connie Chan, Alwyn Cohall, David Kaufman, Sharib Khan, and Rita Kukafka PMCID: PMC2656008 Early Experiences in Evolving an Enterprise-Wide Information Model for Laboratory and Clinical Observations Elizabeth S. Chen, Li Zhou, Vipul Kashyap, Molly Schaeffer, Patricia C. Dykes, and Howard S. Goldberg PMCID: PMC2656065 Alert Override Reasons: A Failure to Communicate Amy E. Chused, Gilad J. Kuperman, and Peter D. Stetson PMCID: PMC2655991 Leading a Horse to Water: Using Automated Reminders to Increase Use of Online Decision Support James J. Cimino and Dmitriy V. Borovtsov PMCID: PMC2656005 Optimizing Feature Representation for Automated Systematic Review Work Prioritization Aaron M. Cohen PMCID: PMC2656096 Exploring MEDLINE Space with Random Indexing and Pathfinder Networks Trevor Cohen PMCID: PMC2656049 Identifying Logical Clinical Context Clusters in Nursing Orders for the Purpose of Information Retrieval Sarah Collins, Suzanne Bakken, James J. Cimino, and Leanne M. Currie PMCID: PMC2656054 Bridging Biological Ontologies and Biosimulation: The Ontology of Physics for Biology Daniel L. Cook, Jose L. V. Mejino, Jr, Maxwell L. Neal, and John H. Gennari PMCID: PMC2656075 Automated Information Extraction of Key Trial Design Elements from Clinical Trial Publications Berry de Bruijn, Simona Carini, Svetlana Kiritchenko, Joel Martin, and Ida Sim PMCID: PMC2655966 Paraphrase Acquisition from Comparable Medical Corpora of Specialized and Lay Texts Louise Deléger and Pierre Zweigenbaum PMCID: PMC2656025 A Prototype System to Support Evidence-based Practice Dina Demner-Fushman, Charlotte Seckman, Cheryl Fisher, Susan E. Hauser, Jennifer Clayton, and George R. Thoma PMCID: PMC2656073 Development and Evaluation of a Clinical Note Section Header Terminology Joshua C. Denny, Randolph A. Miller, Kevin B. Johnson, and Anderson Spickard, III PMCID: PMC2656032 Regular Paths in SparQL: Querying the NCI Thesaurus Landon T. Detwiler, Dan Suciu, and James F. Brinkley PMCID: PMC2656016 The CHICA Smoking Cessation System Stephen M. Downs, Vivienne Zhu, Vibha Anand, Paul G. Biondich, and Aaron E. Carroll PMCID: PMC2655976 Learning Detectors of Events in Multivariate Time Series Josep Roure, Artur Dubrawski, and Jeff Schneider PMCID: PMC2655975 NLP-based Identification of Pneumonia Cases from Free-Text Radiological Reports Peter L. Elkin, David Froehling, Dietlind Wahner-Roedler, Brett Trusko, Gail Welsh, Haobo Ma, Armen X. Asatryan, Jerome I. Tokars, S. Trent Rosenbloom, and Steven H. Brown PMCID: PMC2656026 Word Sense Disambiguation via Semantic Type Classification Jung-Wei Fan and Carol Friedman PMCID: PMC2655949 Evaluating the AMIA-OHSU 10x10 Program to Train Healthcare Professionals in Medical Informatics Sue S. Feldman and William Hersh PMCID: PMC2656028 Semantic Processing to Support Clinical Guideline Development Marcelo Fiszman, Eduardo Ortiz, Bruce E. Bray, and Thomas C. Rindflesch PMCID: PMC2656081 The One Laptop per Child (OLPC) Computer for Health Clinics in Developing Countries Paul Fontelo, Fang Liu, Kai Zhang, Michael Ackerman, and Herman Tolentino PMCID: PMC2656055 caBIG™ Compatibility Review System: Software to Support the Evaluation of Applications Using Defined Interoperability Criteria Robert R. Freimuth, Michael W. Schauer, Preeti Lodha, Poornima Govindrao, Rakesh Nagarajan, and Christopher G. Chute PMCID: PMC2655978 Somatic Mutation Signatures of Cancer Stephen R. Piccolo and Lewis J Frey PMCID: PMC2655983 Using Natural Language Processing to Improve Accuracy of Automated Notifiable Disease Reporting Jeff Friedlin, Shaun Grannis, and J. Marc Overhage PMCID: PMC2656046 A Regional Health Information Exchange: Architecture and Implementation Mark E. Frisse, Janet K. King, Will B. Rice, Lianhong Tang, Jameson P. Porter, Timothy A. Coffman, Michael Assink, Kevin Yang, Monroe Wesley, Rodney L. Holmes, Cynthia Gadd, Kevin B. Johnson, and Vicki Y. Estrin PMCID: PMC2655967 How the Social Web Supports Patient Experimentation with a New Therapy: The demand for patient-controlled and patient-centered informatics Jeana H. Frost, Michael P. Massagli, Paul Wicks, and James Heywood PMCID: PMC2656086 Models for Predicting and Explaining Citation Count of Biomedical Articles Lawrence D. Fu and Constantin Aliferis PMCID: PMC2656101 RxTerms – a drug interface terminology derived from RxNorm Kin Wah Fung, Clement McDonald, and Bruce E Bray PMCID: PMC2655997 Clinician Use and Acceptance of Population-Based Data about Respiratory Pathogens: Implications for Enhancing Population-Based Clinical Practice Per H Gesteland, Mandy A Allison, Catherine J Staes, Matthew H Samore, Michael A Rubin, Marjorie E Carter, Amyanne Wuthrich, Anita Y Kinney, Susan Mottice, and Carrie L Byington PMCID: PMC2656017 Extracting Structured Medication Event Information from Discharge Summaries Sigfried Gold, Noémie Elhadad, Xinxin Zhu, James J. Cimino, and George Hripcsak PMCID: PMC2655993 Analysis of Data Errors in Clinical Research Databases Saveli I. Goldberg, Andrzej Niemierko, and Alexander Turchin PMCID: PMC2656002 Identification and Extraction of Family History Information from Clinical Reports Sergey Goryachev, Hyeoneui Kim, and Qing Zeng-Treitler PMCID: PMC2656021 Combination of endogenous clues for profiling inferred semantic relations: experiments with Gene Ontology Natalia Grabar, Marie-Christine Jaulent, and Thierry Hamon PMCID: PMC2656095 How Usability of a Web-Based Clinical Decision Support System Has the Potential to Contribute to Adverse Medical Events Timothy A.D. Graham, Andre W. Kushniruk, Michael J. Bullard, Brian R. Holroyd, David P. Meurer, and Brian H. Rowe PMCID: PMC2655970 Model-Based De-Identification of Facial Images Ralph Gross, Latanya Sweeney, Jeffrey Cohn, Fernando de la Torre, and Simon Baker PMCID: PMC2655933 Field Evaluation of Commercial Computerized Provider Order Entry Systems in Community Hospitals Kenneth P. Guappone, Joan S. Ash, and Dean F. Sittig PMCID: PMC2655948 Generating Nurse Profiles from Computerized Labor and Delivery Documentation Eric S. Hall and Sidney N. Thornton PMCID: PMC2656022 Auditing Complex Concepts in Overlapping Subsets of SNOMED Yue Wang, Duo Wei, Junchuan Xu, Gai Elhanan, Yehoshua Perl, Michael Halper, Yan Chen, Kent A. Spackman, and George Hripcsak PMCID: PMC2656006 Assessing the Performance Characteristics of Signals Used by a Clinical Event Monitor to Detect Adverse Drug Reactions in the Nursing Home Steven M. Handler, Joseph T. Hanlon, Subashan Perera, Melissa I. Saul, Douglas B. Fridsma, Shyam Visweswaran, Stephanie A. Studenski, Yazan F. Roumani, Nicholas G. Castle, David A. Nace, and Michael J. Becich PMCID: PMC2656060 The Impact Of Web-Based Diabetes Risk Calculators On Information Processing and Risk Perceptions Christopher Harle, Rema Padman, and Julie Downs PMCID: PMC2656037 Towards a Collaborative Filtering Approach to Medication Reconciliation Sharique Hasan, George T. Duncan, Daniel B. Neill, and Rema Padman PMCID: PMC2655956 Biological Entity Recognition with Conditional Random Fields Ying He and Mehmet Kayaalp PMCID: PMC2656029 An Interactive Tool for Visualizing Design Heterogeneity in Clinical Trials Maria-Elena Hernandez, Simona Carini, Margaret-Anne Storey, and Ida Sim PMCID: PMC2656051 What Workforce is Needed to Implement the Health Information Technology Agenda? Analysis from the HIMSS Analytics™ Database William Hersh and Adam Wright PMCID: PMC2656033 Characterization of Patients who Suffer Asthma Exacerbations using Data Extracted from Electronic Medical Records Blanca E. Himes, Isaac S. Kohane, Marco F. Ramoni, and Scott T. Weiss PMCID: PMC2655929 Gene-L’EXPO: a Tool to Extract Knowledge From Transcriptomes and Find ‘Literature-Sparse’ Relationships Between Genes and Tissues Teruyoshi Hishiki, Issei Tamada, and Kousaku Okubo PMCID: PMC2656066 Automatic Pre-Hospital Vital Signs Waveform and Trend Data Capture Fills Quality Management, Triage and Outcome Prediction Gaps Colin F Mackenzie, Peter Hu, Ayan Sen, Rick Dutton, Steve Seebode, Doug Floccare, and Tom Scalea PMCID: PMC2656089 Summarising Complex ICU Data in Natural Language Jim Hunter, Yvonne Freer, Albert Gatt, Robert Logie, Neil McIntosh, Marian van der Meulen, François Portet, Ehud Reiter, Somayajulu Sripada, and Cindy Sykes PMCID: PMC2656014 TN-TIES: A System for Extracting Temporal Information from Emergency Department Triage Notes Ann K. Irvine, Stephanie W. Haas, and Tessa Sullivan PMCID: PMC2656031 The MidSouth eHealth Alliance: Use and Impact in the First Year Kevin B. Johnson, Cynthia S. Gadd, Dominik Aronsky, Kevin Yang, Lianhong Tang, Vicki Estrin, Janet K. King, and Mark Frisse PMCID: PMC2656027 An Agent Based Simulation Tool for Scheduling Emergency Department Physicians Spencer S Jones and R Scott Evans PMCID: PMC2656074 The Value of Personal Health Record (PHR) Systems David Kaelber and Eric C Pan PMCID: PMC2655982 Survival Prediction Models for Estimating the Benefit of Post-Operative Radiation Therapy for Gallbladder Cancer and Lung Cancer Jayashree Kalpathy-Cramer, William Hersh, Jong Song Kim, Charles R Thomas, and Samuel J Wang PMCID: PMC2656000 Creating a Gold Standard for the Readability Measurement of Health Texts Sasikiran Kandula and Qing Zeng-Treitler PMCID: PMC2655974 A Fast Document Classification Algorithm for Gene Symbol Disambiguation in the BITOLA Literature-Based Discovery Support System Andrej Kastrin and Dimitar Hristovski PMCID: PMC2655979 Re-engineering Opportunities in Clinical Research using Workflow Analysis in Community Practice Settings Sharib A. Khan, Rita Kukafka, J. Thomas Bigger, and Stephen B. Johnson PMCID: PMC2655953 Toward Automatic Recognition of High Quality Clinical Evidence Halil Kilicoglu, Dina Demner-Fushman, Thomas C. Rindflesch, Nancy L. Wilczynski, and R. Brian Haynes PMCID: PMC2656036 Predicting Hemodialysis Mortality Utilizing Blood Pressure Trends Ronilda Lacson PMCID: PMC2655936 Fuzzy Temporal Constraint Networks for Clinical Information Albert M. Lai, Simon Parsons, and George Hripcsak PMCID: PMC2655952 Development and Evaluation of Predictive Alerts for Hemodynamic Instability in ICU Patients Larry J. Eshelman, K. P. Lee, Joseph J. Frassica, Wei Zong, Larry Nielsen, and Mohammed Saeed PMCID: PMC2656047 Comparison of Ontology-based Semantic-Similarity Measures Wei-Nchih Lee, Nigam Shah, Karanjot Sundlass, and Mark Musen PMCID: PMC2655943 Experiences of Technology Integration in Home Care Nursing KA Johnson, RS Valdez, GR Casper, SP Kossman, P Carayon, CKL Or, LJ Burke, and PF Brennan PMCID: PMC2656057 Evaluating Online Health Information: Beyond Readability Formulas Gondy Leroy, Stephen Helmreich, James R. Cowie, Trudi Miller, and Wei Zheng PMCID: PMC2656067 Tool Support to Enable Evaluation of the Clinical Response to Treatment Mia A. Levy and Daniel L. Rubin PMCID: PMC2655986 Comparing ICD9-Encoded Diagnoses and NLP-Processed Discharge Summaries for Clinical Trials Pre-Screening: A Case Study Li Li, Herbert S. Chase, Chintan O. Patel, Carol Friedman, and Chunhua Weng PMCID: PMC2656007 Supporting Ontology-based Keyword Search over Medical Databases Anastasios Kementsietsidis, Lipyeow Lim, and Min Wang PMCID: PMC2656038 Annotating breast cancer microarray samples using ontologies Hongfang Liu, Xin Li, Victoria Yoon, and Robert Clarke PMCID: PMC2655965 A Bayesian Classifier for Differentiating Benign versus Malignant Thyroid Nodules using Sonographic Features Yueyi I. Liu, Aya Kamaya, Terry S. Desser, and Daniel L. Rubin PMCID: PMC2656040 Block-Suffix Shifting: Fast, Simultaneous Medical Concept Set Identification in Large Medical Record Corpora Ying Liu, Lucian Vlad Lita, Radu Stefan Niculescu, Prasenjit Mitra, and C. Lee Giles PMCID: PMC2655937 Coupling Direct Collection of Health Risk Information from Patients through Kiosks with Decision Support for Proactive Care Management David F. Lobach, Garry M. Silvey, Janese M. Willis, Kevin R. Kooy, Kensaku Kawamoto, Kevin J. Anstrom, Eric L. Eisenstein, and Frederick Johnson PMCID: PMC2655964 Three Years Experience with the Implementation of a Networked Electronic Medical Record in Haiti William B. Lober, Christina Quiles, Steve Wagner, Rachelle Cassagnol, Roges Lamothes, Don Rock Pierre Alexis, Patrice Joseph, Perri Sutton, Nancy Puttkammer, and Mari M. Kitahata PMCID: PMC2655963 Evaluating Relevance Ranking Strategies for MEDLINE Retrieval Zhiyong Lu, Won Kim, and W. John Wilbur PMCID: PMC2656013 FRIL: A Tool for Comparative Record Linkage Pawel Jurczyk, James J. Lu, Li Xiong, Janet D. Cragan, and Adolfo Correa PMCID: PMC2656092 Improving Classification Performance with Discretization on Biomedical Datasets Jonathan L. Lustgarten, Vanathi Gopalakrishnan, Himanshu Grover, and Shyam Visweswaran PMCID: PMC2656082 Use of Semantic Features to Classify Patient Smoking Status Patrick J. McCormick, Noémie Elhadad, and Peter D. Stetson PMCID: PMC2655942 A vector space method to quantify agreement in qualitative data Delano J. McFarlane, Jessica S. Ancker, and Rita Kukafka PMCID: PMC2655941 Ontology-Based Annotation of Brain MRI Images Ammar Mechouche, Christine Golbreich, Xavier Morandi, and Bernard Gibaud PMCID: PMC2656062 FMA-RadLex: An Application Ontology of Radiological Anatomy derived from the Foundational Model of Anatomy Reference Ontology Jose L.V. Mejino, Jr, Daniel L. Rubin, and James F. Brinkley PMCID: PMC2656009 The MedDRA Paradox Gary H. Merrill PMCID: PMC2655972 The Transition from Paper to Digital: Lessons for Medical Specialty Societies Donald W. Miller, Jr. PMCID: PMC2655931 Electronic Medical Record (EMR) Utilization for Public Health Surveillance Zaruhi R. Mnatsakanyan, Daniel J. Mollura, John R. Ticehurst, Mohammad R. Hashemian, and Lang M. Hung PMCID: PMC2656004 Emerging Trend Prediction in Biomedical Literature Fabian Moerchen, Dmitriy Fradkin, Mathaeus Dejori, and Bernd Wachmann PMCID: PMC2656084 Architectural Choices and Challenges of Integrating Electronic Patient Questionnaires into the Electronic Medical Record to Support Patient-Centered Care Barbara J Moore, Stephan Gaehde, and Clayton Curtis PMCID: PMC2655980 Intravenous Medication Administration in Intensive Care: Opportunities for Technological Solutions Jacqueline Moss, Eta Berner, Olaf Bothe, and Irina Rymarchuk PMCID: PMC2655940 Auditing the NCI Thesaurus with Semantic Web Technologies Fleur Mougin and Olivier Bodenreider PMCID: PMC2655981 Informatics Tools for the Development of Action-Oriented Triggers for Outpatient Adverse Drug Events Hillary J. Mull and Jonathan R. Nebeker PMCID: PMC2655939 Validation of an Electronic System for Recording Medical Student Patient Encounters Flory L. Nkoy, Sarah Petersen, Armand H. Matheny Antommaria, and Christopher G. Maloney PMCID: PMC2655951 Barcode Medication Administration: Supporting Transitions in Articulation Work Laurie L. Novak and Nancy M. Lorenzi PMCID: PMC2655998 Developing Biomedical Ontologies Collaboratively Natalya F. Noy, Tania Tudorache, Sherri de Coronado, and Mark A. Musen PMCID: PMC2656043 Comparison of RFID Systems for Tracking Clinical Interventions at the Bedside Kumiko Ohashi, Sakiko Ota, Lucila Ohno-Machado, and Hiroshi Tanaka PMCID: PMC2656010 Visualizing Multivariate Time Series Data to Detect Specific Medical Conditions Patricia Ordóñez, Marie desJardins, Carolyn Feltes, Christoph U. Lehmann, and James Fackler PMCID: PMC2656052 Improving Calibration of Logistic Regression Models by Local Estimates Melanie Osl, Lucila Ohno-Machado, Christian Baumgartner, Bernhard Tilg, and Stephan Dreiseitl PMCID: PMC2656048 A Constraint Satisfaction Approach to Data-Driven Implementation of Clinical Practice Guidelines Craig Kuziemsky, Dympna O’Sullivan, Wojtek Michalowski, Szymon Wilk, and Ken Farion PMCID: PMC2655944 Automatic Quality of Life Prediction Using Electronic Medical Records Serguei Pakhomov, Nilay Shah, Penny Hanson, Saranya Balasubramaniam, and Steven A. Smith PMCID: PMC2656045 Analysis of Maryland Poisoning Deaths Using Classification And Regression Tree (CART) Analysis Carol Pamer, Tracey Serpi, and Joseph Finkelstein PMCID: PMC2656088 Using Semantic and Structural Properties of the UMLS to Discover Potential Terminological Relationships Chintan O. Patel and James J. Cimino PMCID: PMC2656063 LexValueSets: An Approach for Context-Driven Value Sets Extraction Jyotishman Pathak, Guoqian Jiang, Sridhar O. Dwarkanath, James D. Buntrock, and Christopher G. Chute PMCID: PMC2656093 The Usefulness of Information and Communication Technologies in Crisis Response Sharoda A. Paul, Madhu Reddy, Joanna Abraham, and Christopher DeFlitch PMCID: PMC2655958 Supporting the Design of Translational Clinical Studies through the Generation and Verification of Conceptual Knowledge-anchored Hypotheses Philip R.O. Payne, Tara B. Borlawsky, Alan Kwok, and Andrew W. Greaves PMCID: PMC2656058 Assessing Use of Cognitive Heuristic Representativeness in Clinical Reasoning Velma L. Payne and Rebecca S. Crowley PMCID: PMC2656076 Web Screening of US Nursing Homes by Location and Quality Glenn Pearson, Michael Gill, and George Thoma PMCID: PMC2656091 Application of Statistical Process Control Methods to Monitor Guideline Adherence: A Case Study Niels Peek, Rick Goud, and Ameen Abu-Hanna PMCID: PMC2656072 Using multi-terminology indexing for the assignment of MeSH descriptors to health resources in a French online catalogue Suzanne Pereira, Aurélie Névéol, Gaétan Kerdelhué, Elisabeth Serrot, Michel Joubert, and Stéfan J. Darmoni PMCID: PMC2656077 Using the RxNorm Web Services API for Quality Assurance Purposes Lee Peters and Olivier Bodenreider PMCID: PMC2656097 Identifying Data Sharing in Biomedical Literature Heather A. Piwowar and Wendy W. Chapman PMCID: PMC2655927 Searching Electronic Health Records for Temporal Patterns in Patient Histories: A Case Study with Microsoft Amalga Catherine Plaisant, Stanley Lam, Ben Shneiderman, Mark S. Smith, David Roseman, Greg Marchand, Michael Gillam, Craig Feied, Jonathan Handler, and Hank Rappaport PMCID: PMC2655947 Concept Similarity in Publications Precedes Cross-disciplinary Collaboration Andrew R. Post and James H. Harrison, Jr PMCID: PMC2655988 A Multi-level Spatial Clustering Algorithm for Detection of Disease Outbreaks Jialan Que and Fu-Chiang Tsui PMCID: PMC2655962 Implementing an integrated computerized patient record system: Towards an evidence-based information system implementation practice in healthcare Bahlol Rahimi, Anna Moberg, Toomas Timpka, and Vivian Vimarlund PMCID: PMC2655989 The Effects of Hands Free Communication Devices on Clinical Communication: Balancing Communication Access Needs with User Control Joshua E. Richardson and Joan S. Ash PMCID: PMC2656106 iPad: Semantic Annotation and Markup of Radiological Images Daniel L. Rubin, Cesar Rodriguez, Priyanka Shah, and Chris Beaulieu PMCID: PMC2655990 An Agent-Based Model for Evaluating Surveillance Methods for Catheter-Related Bloodstream Infection Michael A. Rubin, Jeanmarie Mayer, Tom Greene, Brian C. Sauer, Bala Hota, William Trick, John A. Jernigan, Matthew H. Samore, and CDC Prevention Epicenter Program PMCID: PMC2655959 From Episodes of Care to Diagnosis Codes: Automatic Text Categorization for Medico-Economic Encoding Patrick Ruch, Julien Gobeill, Imad Tbahriti, and Antoine Geissbühler PMCID: PMC2655971 “What’s the Story?” Information Needs of Trauma Teams Aleksandra Sarcevic and Randall S. Burd PMCID: PMC2656064 Structured Product Labeling Improves Detection of Drug-Intolerance Issues Gunther Schadow PMCID: PMC2655938 Evaluation of a Document Search Engine in a Clinical Department System Stefan Schulz, Philipp Daumke, Pascal Fischer, and Marcel Müller PMCID: PMC2655987 UMLS-Query: A Perl Module for Querying the UMLS Nigam H. Shah and Mark A. Musen PMCID: PMC2656020 A Cost Model for Personal Health Records (PHRs) Sapna Shah, David C Kaelber, Adam Vincent, Eric C Pan, Douglas Johnston, and Blackford Middleton PMCID: PMC2656035 A Framework for Characterizing Drug Information Sources Mark Sharp, Olivier Bodenreider, and Nina Wacholder PMCID: PMC2656044 Ranking single nucleotide polymorphisms by potential deleterious effects Phil Hyoun Lee and Hagit Shatkay PMCID: PMC2656034 Generating Application Ontologies from Reference Ontologies Marianne Shaw, Landon T. Detwiler, James F. Brinkley, and Dan Suciu PMCID: PMC2655930 Enhancing an ePrescribing System By Adding Medication Histories and Formularies: the Regenstrief Medication Hub Linas Simonaitis, Anne Belsito, and J. Marc Overhage PMCID: PMC2655932 PatientsLikeMe: Consumer Health Vocabulary as a Folksonomy Catherine Arnott Smith and Paul J. Wicks PMCID: PMC2656083 Building an Automated Problem List Based on Natural Language Processing: Lessons Learned in the Early Phase of Development Imre Solti, Barry Aaronson, Grant Fletcher, Magdolna Solti, John H. Gennari, Melissa Cooper, and Thomas Payne PMCID: PMC2655946 Optimizing A Syndromic Surveillance Text Classifier for Influenza-like Illness: Does Document Source Matter? Brett R. South, Wendy W. Chapman, Sylvain Delisle, Shuying Shen, Ericka Kalp, Trish Perl, Matthew H. Samore, and Adi V. Gundlapalli PMCID: PMC2655960 Modeling and using a web-based and tutored portfolio to support certification of professional competence in transfusion medicine Pascal Staccini and Philippe Rouger PMCID: PMC2655984 A Real-time Ventilator Management Dashboard: Toward Hardwiring Compliance with Evidence-based Guidelines John Starmer and Dario Giuse PMCID: PMC2656080 An electronic encounter log’s failure to scale Walton Sumner and Phil Asaro PMCID: PMC2655968 A Tool for Improving the Longitudinal Imaging Characterization for Neuro-Oncology Cases Ricky K. Taira, Alex Bui, William Hsu, Vijayaraghavan Bashyam, Shishir Dube, Emily Watt, Lewellyn Andrada, Suzie El-Saden, Timothy Cloughesy, and Hooshang Kangarloo PMCID: PMC2656085 Understanding Intention to Use Electronic Information Resources: A Theoretical Extension of the Technology Acceptance Model (TAM) Donghua Tao PMCID: PMC2656102 Coping efficiently with now-relative medical data Bela Stantic, Paolo Terenziani, and Abdul Sattar PMCID: PMC2656018 Using an Integrated Ontology and Information Model for Querying and Reasoning about Phenotypes: The Case of Autism Samson W. Tu, Lakshika Tennakoon, Martin O'Connor, Ravi Shankar, and Amar Das PMCID: PMC2655950 Identification of Documented Medication Non-Adherence in Physician Notes Alexander Turchin, Holly I. Wheeler, Matthew Labreche, Julia T. Chu, Merri L. Pendergrass, and Jonathan S. Einbinder PMCID: PMC2655985 Connecting Public Health IT Systems with Enacted Work: Report of an Ethnographic Study Anne M. Turner, Judy Ramey, and E. Sally Lee PMCID: PMC2655928 Barriers to Organizing Information during Cancer Care: “I don’t know how people do it” Kenton T. Unruh and Wanda Pratt PMCID: PMC2656024 Integrating an automatic classification method into the medical image retrieval process Epaphrodite Uwimana and Miguel E. Ruiz PMCID: PMC2655992 Two Approaches to Assertion Classification Özlem Uzuner, Xiaoran Zhang, and Tawanda Sibanda PMCID: PMC2656003 Content and Structure of Clinical Problem Lists: A Corpus Analysis Tielman T. Van Vleck, Adam Wilcox, Peter D. Stetson, Stephen B. Johnson, and Noémie Elhadad PMCID: PMC2655994 Assessing Usage Patterns of Electronic Clinical Documentation Templates David K. Vawdrey PMCID: PMC2656104 A Patient-Centric Taxonomy for Personal Health Records (PHRs) Adam Vincent, David C. Kaelber, Eric Pan, Sapna Shah, Douglas Johnston, and Blackford Middleton PMCID: PMC2656090 Embracing Change in a Health Information Exchange Daniel J. Vreeman, Marilyn Stark, Gail L. Tomashefski, D. Ryan Phillips, and Paul R. Dexter PMCID: PMC2656094 Analysis of a Failed Clinical Decision Support System for Management of Congestive Heart Failure Rajiv Wadhwa, Douglas B. Fridsma, Melissa I. Saul, Louis E. Penrod, Shyam Visweswaran, Gregory F. Cooper, and Wendy Chapman PMCID: PMC2655961 Complexity Measures to Track the Evolution of a SNOMED Hierarchy Duo Wei, Yue Wang, Yehoshua Perl, Junchuan Xu, Michael Halper, and Kent A. Spackman PMCID: PMC2655969 Automated Knowledge Acquisition from Clinical Narrative Reports Xiaoyan Wang, Amy Chused, Noémie Elhadad, Carol Friedman, and Marianthi Markatou PMCID: PMC2656103 Evaluation of a Dynamic Bayesian Belief Network to Predict Osteoarthritic Knee Pain Using Data from the Osteoarthritis Initiative Emily W. Watt and Alex A.T. Bui PMCID: PMC2656041 Synthesizing Community Wisdom: A Model for Sharing Cancer-Related Resources through Social Networking and Collaborative Partnerships Jacob B. Weiss and Nancy M. Lorenzi PMCID: PMC2656050 Understanding Interdisciplinary Health Sciences Collaborations: A Campus-Wide Survey of Obesity Experts Chunhua Weng, Dympna Gallagher, Michael E. Bales, Suzanne Bakken, and Henry N. Ginsberg PMCID: PMC2656079 Using Computerized Provider Order Entry and Clinical Decision Support to Improve Referring Physicians’ Implementation of Consultants’ Medical Recommendations Martin C. Were, Greg Abernathy, Siu L. Hui, Carol Kempf, and Michael Weiner PMCID: PMC2656070 Informatics Competencies for Nursing and Healthcare Leaders Bonnie L. Westra and Connie W. Delaney PMCID: PMC2655955 Physician Use of Outpatient Electronic Health Records to Improve Care Adam Wilcox, Watson A. Bowes, III, Sidney N. Thornton, and Scott P. Narus PMCID: PMC2655996 Engineering of a Clinical Decision Support Framework for the Point of Care Use Szymon Wilk, Wojtek Michalowski, Dympna O’Sullivan, Ken Farion, and Stan Matwin PMCID: PMC2656001 Methods for Building Sense Inventories of Abbreviations in Clinical Notes Hua Xu, Peter D. Stetson, and Carol Friedman PMCID: PMC2656023 Unsupervised Method for Automatic Construction of a Disease Dictionary from a Large Free Text Collection Rong Xu, Kaustubh Supekar, Alex Morgan, Amar Das, and Alan Garber PMCID: PMC2656087 SYRIAC: The SYstematic Review Information Automated Collection System A Data Warehouse for Facilitating Automated Biomedical Text Classification Jianji J. Yang, Aaron M. Cohen, and Marian S. McDonagh PMCID: PMC2656099 Finding the Meaning of Medical Concept Correlations Meliha Yetisgen-Yildiz and Wanda Pratt PMCID: PMC2656105 Adherence to home-monitoring and its impact on survival in post-lung transplantation patients Hojung J Yoon, Hongfei Guo, Marshall Hertz, and Stanley Finkelstein PMCID: PMC2656078 An Adverse Drug Event and Medication Error Reporting System for Ambulatory Care (MEADERS) Atif Zafar, John Hickner, Wilson Pace, and William Tierney PMCID: PMC2656098 Design and Implementation of a Personal Medication Record— MyMedicationList Kelly Zeng, Olivier Bodenreider, and Stuart J. Nelson PMCID: PMC2656100 Improving Patient Comprehension and Recall of Discharge Instructions by Supplementing Free Texts with Pictographs Qing Zeng-Treitler, Hyeoneui Kim, and Martha Hunter PMCID: PMC2656019 Template-Driven Spatial-Temporal Outbreak Simulation for Outbreak Detection Evaluation Min Zhang and Garrick L. Wallstrom PMCID: PMC2655995 ChMP: A Collaborative Medical History Portal Noah H. Zimmerman, Chirag Patel, and David P. Chen PMCID: PMC2655935 |
