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Pathogen Functional Genomics Resource Center
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Pathogen Functional Genomics Resource Center (PFGRC)
Bioinformatics Support
(All links below are to non-Government web sites.)
The PFGRC makes its resources, technology platforms, and scientific and technical expertise available for studies for the purpose of
developing bioinformatics tools
of broad interest and value to the scientific community.
Open source soft ware Packages
APEX-QPT
: A quantitative proteomics tool
EASE
: Resources for biological role analysis of gene lists
F. Tularensis comparative analysis tool
Ginkgo
: A CGH and expression microarray statistical analysis and normalization platform
Magnolia
: A microarray data management and export system for PFGRC microarrays
Microarray Annotation Pipeline
: Annotation files for PFGRC microarrays
S. pneumoniae comparative analysis tool
TM4
: A comprehensive microarray software suite for data management and analysis
LEM
(Linear Expression Maps): A tool for visualizing gene expression on a chromosomal coordinate map. Implemented in the MeV Application
NonpaR
: Four nonparametric statistical test for common microarray experimental designs. Implemented in the MeV Application
Tutorial and Guide to Microarray Data Analysis available 6/2008
Contact Info
Maria Y. Giovanni
Assistant Director for Microbial Genomics and Advanced Technology
E-mail:
mgiovanni@niaid.nih.gov
Highlight
DNA Micoarray Request Form
See Also
NIAID Genomics Initiatives
(PDF)
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Contact Info
Maria Y. Giovanni
Assistant Director for Microbial Genomics and Advanced Technology
E-mail:
mgiovanni@niaid.nih.gov
Highlight
DNA Micoarray Request Form
See Also
NIAID Genomics Initiatives
(PDF)
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Last Updated July 8, 2008
National Institute of Allergy and Infectious Diseases (NIAID)
National Institutes of Health (NIH)
Department of Health and Human Services (HHS)