| | Other Issues: previous | next | latest | archiveCommentary Fractal parameters and vascular networks: facts & artifacts Daniele Mancardi, Gianfranco Varetto, Enrico Bucci, Fabrizio Maniero, and Caterina Guiot Theor Biol Med Model. 2008; 5: 12. Published online 2008 July 17. doi: 10.1186/1742-4682-5-12.PMCID: PMC2490683 Research A mathematical model of venous neointimal hyperplasia formation Paula Budu-Grajdeanu, Richard C Schugart, Avner Friedman, Christopher Valentine, Anil K Agarwal, and Brad H Rovin Theor Biol Med Model. 2008; 5: 2. Published online 2008 January 23. doi: 10.1186/1742-4682-5-2.PMCID: PMC2263040 Variance in multiplex suspension array assays: A distribution generation machine for multiplex counts Brian P Hanley Theor Biol Med Model. 2008; 5: 3. Published online 2008 January 28. doi: 10.1186/1742-4682-5-3.PMCID: PMC2267777 Scaling, growth and cyclicity in biology: a new computational approach Pier Paolo Delsanto, Antonio S Gliozzi, and Caterina Guiot Theor Biol Med Model. 2008; 5: 5. Published online 2008 February 29. doi: 10.1186/1742-4682-5-5.PMCID: PMC2289804 Functional mapping imprinted quantitative trait loci underlying developmental characteristics Yuehua Cui, Shaoyu Li, and Gengxin Li Theor Biol Med Model. 2008; 5: 6. Published online 2008 March 17. doi: 10.1186/1742-4682-5-6.PMCID: PMC2324076 A statistical model for the identification of genes governing the incidence of cancer with age Kiranmoy Das and Rongling Wu Theor Biol Med Model. 2008; 5: 7. Published online 2008 April 16. doi: 10.1186/1742-4682-5-7.PMCID: PMC2365934 A mathematical model of glutathione metabolism Michael C Reed, Rachel L Thomas, Jovana Pavisic, S Jill James, Cornelia M Ulrich, and H Frederik Nijhout Theor Biol Med Model. 2008; 5: 8. Published online 2008 April 28. doi: 10.1186/1742-4682-5-8.PMCID: PMC2391141 Probability landscapes for integrative genomics Annick Lesne and Arndt Benecke Theor Biol Med Model. 2008; 5: 9. Published online 2008 May 20. doi: 10.1186/1742-4682-5-9.PMCID: PMC2409305 Origin of the blood hyperserotonemia of autism Skirmantas Janušonis Theor Biol Med Model. 2008; 5: 10. Published online 2008 May 22. doi: 10.1186/1742-4682-5-10.PMCID: PMC2488334 Introduction of an agent-based multi-scale modular architecture for dynamic knowledge representation of acute inflammation Gary An Theor Biol Med Model. 2008; 5: 11. Published online 2008 May 27. doi: 10.1186/1742-4682-5-11.PMCID: PMC2442588 Heterogeneity in multistage carcinogenesis and mixture modeling Sandro Gsteiger and Stephan Morgenthaler Theor Biol Med Model. 2008; 5: 13. Published online 2008 July 21. doi: 10.1186/1742-4682-5-13.PMCID: PMC2515834 Correlation between nucleotide composition and folding energy of coding sequences with special attention to wobble bases Jan C Biro Theor Biol Med Model. 2008; 5: 14. Published online 2008 July 29. doi: 10.1186/1742-4682-5-14.PMCID: PMC2515297 The velocity of the arterial pulse wave: a viscous-fluid shock wave in an elastic tube Page R Painter Theor Biol Med Model. 2008; 5: 15. Published online 2008 July 29. doi: 10.1186/1742-4682-5-15.PMCID: PMC2527553 Does codon bias have an evolutionary origin? Jan C Biro Theor Biol Med Model. 2008; 5: 16. Published online 2008 July 30. doi: 10.1186/1742-4682-5-16.PMCID: PMC2519059 The hyperbolic effect of density and strength of inter beta-cell coupling on islet bursting: a theoretical investigation Aparna Nittala and Xujing Wang Theor Biol Med Model. 2008; 5: 17. Published online 2008 August 3. doi: 10.1186/1742-4682-5-17.PMCID: PMC2538510 Identification of restriction endonuclease with potential ability to cleave the HSV-2 genome: Inherent potential for biosynthetic versus live recombinant microbicides Misaki Wayengera, Henry Kajumbula, and Wilson Byarugaba Theor Biol Med Model. 2008; 5: 18. Published online 2008 August 7. doi: 10.1186/1742-4682-5-18.PMCID: PMC2526989 Utility of a single adjusting compartment: a novel methodology for whole body physiologically-based pharmacokinetic modelling Hirotaka Ando, Shigeru Izawa, Wataru Hori, and Ippei Nakagawa Theor Biol Med Model. 2008; 5: 19. Published online 2008 August 8. doi: 10.1186/1742-4682-5-19.PMCID: PMC2542356 Feature context-dependency and complexity-reduction in probability landscapes for integrative genomics Annick Lesne and Arndt Benecke Theor Biol Med Model. 2008; 5: 21. Published online 2008 September 10. doi: 10.1186/1742-4682-5-21.PMCID: PMC2559821 Analysis of novel geometry-independent method for dialysis access pressure-flow monitoring William F Weitzel, Casey L Cotant, Zhijie Wen, Rohan Biswas, Prashant Patel, Harsha Panduranga, Yogesh B Gianchandani, and Jonathan M Rubin Theor Biol Med Model. 2008; 5: 22. Published online 2008 November 5. doi: 10.1186/1742-4682-5-22.PMCID: PMC2586012 Transient antiretroviral therapy selecting for common HIV-1 mutations substantially accelerates the appearance of rare mutations Tinevimbo Shiri and Alex Welte Theor Biol Med Model. 2008; 5: 25. Published online 2008 November 14. doi: 10.1186/1742-4682-5-25.PMCID: PMC2605440 Reviews The Peter Pan paradigm J Craig Cohen and Janet E Larson Theor Biol Med Model. 2008; 5: 1. Published online 2008 January 8. doi: 10.1186/1742-4682-5-1.PMCID: PMC2249573 Extracting key information from historical data to quantify the transmission dynamics of smallpox Hiroshi Nishiura, Stefan O Brockmann, and Martin Eichner Theor Biol Med Model. 2008; 5: 20. Published online 2008 August 20. doi: 10.1186/1742-4682-5-20.PMCID: PMC2538509 Mitochondrial concept of leukemogenesis: key role of oxygen-peroxide effects Boris N Lyu, Sanzhar B Ismailov, Bolat Ismailov, and Marina B Lyu Theor Biol Med Model. 2008; 5: 23. Published online 2008 November 11. doi: 10.1186/1742-4682-5-23.PMCID: PMC2614412 Activation instead of blocking mesolimbic dopaminergic reward circuitry is a preferred modality in the long term treatment of reward deficiency syndrome (RDS): a commentary Kenneth Blum, Amanda Lih Chuan Chen, Thomas JH Chen, Eric R Braverman, Jeffrey Reinking, Seth H Blum, Kimberly Cassel, Bernard W Downs, Roger L Waite, Lonna Williams, Thomas J Prihoda, Mallory M Kerner, Tomas Palomo, David E Comings, Howard Tung, Patrick Rhoades, and Marlene Oscar-Berman Theor Biol Med Model. 2008; 5: 24. Published online 2008 November 12. doi: 10.1186/1742-4682-5-24.PMCID: PMC2615745 Software Sampling and sensitivity analyses tools (SaSAT) for computational modelling Alexander Hoare, David G Regan, and David P Wilson Theor Biol Med Model. 2008; 5: 4. Published online 2008 February 27. doi: 10.1186/1742-4682-5-4.PMCID: PMC2292159 |