| | Articles SURVEY AND SUMMARY: ADEPTs: information necessary for subcellular distribution of eukaryotic sorting isozymes resides in domains missing from eubacterial and archaeal counterparts David R. Stanford, Nancy C. Martin, and Anita K. Hopper Nucleic Acids Res. 2000 January 15; 28(2): 383–392. PMCID: PMC102526 Crystal structure of the human O6-alkylguanine-DNA alkyltransferase Jane E. A. Wibley, Anthony E. Pegg, and Peter C. E. Moody Nucleic Acids Res. 2000 January 15; 28(2): 393–401. PMCID: PMC102527 An exonic splicing silencer in the testes-specific DNA ligase III β exon Shern L. Chew, Lysa Baginsky, and Ian C. Eperon Nucleic Acids Res. 2000 January 15; 28(2): 402–410. PMCID: PMC102500 Members of the SRY family regulate the human LINE retrotransposons Thierry Tchénio, Jean-François Casella, and Thierry Heidmann Nucleic Acids Res. 2000 January 15; 28(2): 411–415. PMCID: PMC102531 Better conditions for mammalian in vitro splicing provided by acetate and glutamate as potassium counterions Vienna Reichert and Melissa J. Moore Nucleic Acids Res. 2000 January 15; 28(2): 416–423. PMCID: PMC102525 APOBEC-1 dependent cytidine to uridine editing of apolipoprotein B RNA in yeast Geoffrey S. C. Dance, Mark P. Sowden, Yan Yang, and Harold C. Smith Nucleic Acids Res. 2000 January 15; 28(2): 424–429. PMCID: PMC102520 Naturally occurring mutations in the human HNF4α gene impair the function of the transcription factor to a varying degree Jörn Lausen, Heike Thomas, Ira Lemm, Michael Bulman, Michael Borgschulze, Anja Lingott, Andrew T. Hattersley, and Gerhart U. Ryffel Nucleic Acids Res. 2000 January 15; 28(2): 430–437. PMCID: PMC102517 Inhibition of in vitro and ex vivo translation by a transplatin-modified oligo(2′-O-methylribonucleotide) directed against the HIV-1 gag-pol frameshift signal Karine Aupeix-Scheidler, Sandrine Chabas, Laure Bidou, Jean-Pierre Rousset, Marc Leng, and Jean-Jacques Toulmé Nucleic Acids Res. 2000 January 15; 28(2): 438–445. PMCID: PMC102513 Myc induces the nucleolin and BN51 genes: possible implications in ribosome biogenesis Peter J. Greasley, Claude Bonnard, and Bruno Amati Nucleic Acids Res. 2000 January 15; 28(2): 446–453. PMCID: PMC102507 HMG boxes of DSP1 protein interact with the Rel homology domain of transcription factors M. Decoville, M. J. Giraud-Panis, C. Mosrin-Huaman, M. Leng, and D. Locker Nucleic Acids Res. 2000 January 15; 28(2): 454–462. PMCID: PMC102508 Evolutionary origin, diversification and specialization of eukaryotic MutS homolog mismatch repair proteins Kevin M. Culligan, Gilbert Meyer-Gauen, James Lyons-Weiler, and John B. Hays Nucleic Acids Res. 2000 January 15; 28(2): 463–471. PMCID: PMC102523 Nucleoplasmin-mediated chromatin remodelling is required for Xenopus sperm nuclei to become licensed for DNA replication Peter J. Gillespie and J. Julian Blow Nucleic Acids Res. 2000 January 15; 28(2): 472–480. PMCID: PMC102529 In vitro selection and characterization of a highly efficient Zn(II)-dependent RNA-cleaving deoxyribozyme Jing Li, Wenchao Zheng, Angela H. Kwon, and Yi Lu Nucleic Acids Res. 2000 January 15; 28(2): 481–488. PMCID: PMC102519 RNA aptamers for the MS2 bacteriophage coat protein and the wild-type RNA operator have similar solution behaviour Andrew M. Parrott, Hugo Lago, Chris J. Adams, Alison E. Ashcroft, Nicola J. Stonehouse, and Peter G. Stockley Nucleic Acids Res. 2000 January 15; 28(2): 489–497. PMCID: PMC102504 Visualisation of plasmid replication intermediates containing reversed forks E. Viguera, P. Hernández, D. B. Krimer, R. Lurz, and J. B. Schvartzman Nucleic Acids Res. 2000 January 15; 28(2): 498–503. PMCID: PMC102505 Histidylated oligolysines increase the transmembrane passage and the biological activity of antisense oligonucleotides Chantal Pichon, Mahajoub Bello Roufaï, Michel Monsigny, and Patrick Midoux Nucleic Acids Res. 2000 January 15; 28(2): 504–512. PMCID: PMC102506 p73 competes with p53 and attenuates its response in a human ovarian cancer cell line Faina Vikhanskaya, Maurizio D’Incalci, and Massimo Broggini Nucleic Acids Res. 2000 January 15; 28(2): 513–519. PMCID: PMC102516 The Drosophila homologue of the 64 kDa subunit of cleavage stimulation factor interacts with the 77 kDa subunit encoded by the suppressor of forked gene Lee S. Hatton, Jyrki J. Eloranta, Luisa M. Figueiredo, Yoshio Takagaki, James L. Manley, and Kevin O’Hare Nucleic Acids Res. 2000 January 15; 28(2): 520–526. PMCID: PMC102530 Sequence-specific binding of Taz1p dimers to fission yeast telomeric DNA Karen G. Spink, Rebecca J. Evans, and Alistair Chambers Nucleic Acids Res. 2000 January 15; 28(2): 527–533. PMCID: PMC102532 Oligonucleotide-conjugated beads for transdominant genetic experiments Michael J. Feldhaus, Michael Lualhati, Karen Cardon, Bruce Roth, and Alexander Kamb Nucleic Acids Res. 2000 January 15; 28(2): 534–543. PMCID: PMC102503 Formation of 2′-deoxyoxanosine from 2′-deoxyguanosine and nitrous acid: mechanism and intermediates Toshinori Suzuki, Hiroshi Ide, Masaki Yamada, Nobuyuki Endo, Kenji Kanaori, Kunihiko Tajima, Takashi Morii, and Keisuke Makino Nucleic Acids Res. 2000 January 15; 28(2): 544–551. PMCID: PMC102522 Bacillus subtilis LrpC is a sequence-independent DNA-binding and DNA-bending protein which bridges DNA Angels Tapias, Gema López, and Silvia Ayora Nucleic Acids Res. 2000 January 15; 28(2): 552–559. PMCID: PMC102501 The mechanism of complex formation between Fli-1 and SRF transcription factors Pamela Dalgleish and Andrew D. Sharrocks Nucleic Acids Res. 2000 January 15; 28(2): 560–569. PMCID: PMC102515 The dhfr oriβ-binding protein RIP60 contains 15 zinc fingers: DNA binding and looping by the central three fingers and an associated proline-rich region Christopher R. Houchens, William Montigny, Lori Zeltser, Lisa Dailey, Jonathan M. Gilbert, and N. H. Heintz Nucleic Acids Res. 2000 January 15; 28(2): 570–581. PMCID: PMC102514 Nucleocytoplasmic shuttling: a novel in vivo property of antisense phosphorothioate oligodeoxynucleotides Peter Lorenz, Tom Misteli, Brenda F. Baker, C. Frank Bennett, and David L. Spector Nucleic Acids Res. 2000 January 15; 28(2): 582–592. PMCID: PMC102511 Conformational transition in DNA on a cold surface X. Z. Feng, R. Bash, P. Balagurumoorthy, D. Lohr, R. E. Harrington, and S. M. Lindsay Nucleic Acids Res. 2000 January 15; 28(2): 593–596. PMCID: PMC102510 A single-stranded DNA-binding protein shared by telomeric repeats, the variant surface glycoprotein transcription promoter and the procyclin transcription terminator of Trypanosoma brucei Magali Berberof, Luc Vanhamme, Sylvie Alexandre, Stéphane Lips, Patricia Tebabi, and Etienne Pays Nucleic Acids Res. 2000 January 15; 28(2): 597–604. PMCID: PMC102509 Measurement of locus copy number by hybridisation with amplifiable probes John A. L. Armour, Carolina Sismani, Philippos C. Patsalis, and Gareth Cross Nucleic Acids Res. 2000 January 15; 28(2): 605–609. PMCID: PMC102499 Conserved features of Y RNAs: a comparison of experimentally derived secondary structures Sander W. M. Teunissen, Martijn J. M. Kruithof, A. Darise Farris, John B. Harley, Walther J. van Venrooij, and Ger J. M. Pruijn Nucleic Acids Res. 2000 January 15; 28(2): 610–619. PMCID: PMC102524 The N-terminal region of DNA polymerase δ catalytic subunit is necessary for holoenzyme function Sylvie Briand Schumacher, Manuel Stucki, and Ulrich Hübscher Nucleic Acids Res. 2000 January 15; 28(2): 620–625. PMCID: PMC102512 A novel Snail-related transcription factor Smuc regulates basic helix–loop–helix transcription factor activities via specific E-box motifs Hiroshi Kataoka, Toshinori Murayama, Masayuki Yokode, Seiichi Mori, Hideto Sano, Harunobu Ozaki, Yoshifumi Yokota, Shin-Ichi Nishikawa, and Toru Kita Nucleic Acids Res. 2000 January 15; 28(2): 626–633. PMCID: PMC102498 In vitro evidence for the interaction of tRNA3Lys with U3 during the first strand transfer of HIV-1 reverse transcription Fabienne Brulé, Guillaume Bec, Gérard Keith, Stuart F. J. Le Grice, Bernard P. Roques, Bernard Ehresmann, Chantal Ehresmann, and Roland Marquet Nucleic Acids Res. 2000 January 15; 28(2): 634–640. PMCID: PMC102502 The 5′ stem–loop regulates expression of collagen α1(I) mRNA in mouse fibroblasts cultured in a three-dimensional matrix B. Stefanovic, J. Lindquist, and D. A. Brenner Nucleic Acids Res. 2000 January 15; 28(2): 641–647. PMCID: PMC102518 WRN helicase expression in Werner syndrome cell lines Michael J. Moser, Ashwini S. Kamath-Loeb, Jessica E. Jacob, Samuel E. Bennett, Junko Oshima, and Raymond J. Monnat, Jr Nucleic Acids Res. 2000 January 15; 28(2): 648–654. PMCID: PMC102521 3′-Minor groove binder-DNA probes increase sequence specificity at PCR extension temperatures Igor V. Kutyavin, Irina A. Afonina, Alan Mills, Vladimir V. Gorn, Eugeny A. Lukhtanov, Evgeniy S. Belousov, Michael J. Singer, David K. Walburger, Sergey G. Lokhov, Alexander A. Gall, Robert Dempcy, Michael W. Reed, Rich B. Meyer, and Joe Hedgpeth Nucleic Acids Res. 2000 January 15; 28(2): 655–661. PMCID: PMC102528 NAR Methods Online Cloning of polymorphisms (COP): enrichment of polymorphic sequences from complex genomes Jingfeng Li, Fuli Wang, Veronika Zabarovska, Claes Wahlestedt, and Eugene R. Zabarovsky Nucleic Acids Res. 2000 January 15; 28(2): e1. PMCID: PMC102533 Transcript quantitation in total yeast cellular RNA using kinetic PCR John J. Kang, Robert M. Watson, Mary E. Fisher, Russell Higuchi, David H. Gelfand, and Michael J. Holland Nucleic Acids Res. 2000 January 15; 28(2): e2. PMCID: PMC102534 UPA, a universal protein array system for quantitative detection of protein–protein, protein–DNA, protein–RNA and protein–ligand interactions Hui Ge Nucleic Acids Res. 2000 January 15; 28(2): e3. PMCID: PMC102535 The specificity of protein–DNA crosslinking by formaldehyde: in vitro and in Drosophila embryos Joseph Toth and Mark D. Biggin Nucleic Acids Res. 2000 January 15; 28(2): e4. PMCID: PMC102536 Use of immobilized PCR primers to generate covalently immobilized DNAs for in vitro transcription/translation reactions Joanne D. Andreadis and Linda A. Chrisey Nucleic Acids Res. 2000 January 15; 28(2): e5. PMCID: PMC102537 A method for preparing genomic DNA that restrains branch migration of Holliday junctions Thorsten Allers and Michael Lichten Nucleic Acids Res. 2000 January 15; 28(2): e6. PMCID: PMC102538 Interspersed repetitive sequence (IRS)–PCR for typing of whole genome radiation hybrid panels Heinz Himmelbauer, Leonard C. Schalkwyk, and Hans Lehrach Nucleic Acids Res. 2000 January 15; 28(2): e7. PMCID: PMC102539 Identification and characterisation of novel human Y-chromosomal microsatellites from sequence database information Qasim Ayub, Aisha Mohyuddin, Raheel Qamar, Kehkashan Mazhar, Tatiana Zerjal, S. Qasim Mehdi, and Chris Tyler-Smith Nucleic Acids Res. 2000 January 15; 28(2): e8. PMCID: PMC102540 |