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UGID:155565     UniGene Hs.159118     Homo sapiens (human)   AMD1 Order cDNA clone, Links
Adenosylmethionine decarboxylase 1 (AMD1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001155561.1 PREDICTED: S-adenosylmethionine decarboxylase 1 isoform 4 P. troglodytes 100.0 333
NP_001625.2 adenosylmethionine decarboxylase 1 isoform 1 precursor H. sapiens 100.0 333
NP_776415.1 adenosylmethionine decarboxylase 1 B. taurus 99.7 333
XP_001480195.1 PREDICTED: similar to S-adenosylmethionine decarboxylase M. musculus 99.4 333
XP_001331604.1 PREDICTED: hypothetical protein D. rerio 85.5 330
NP_001088953.1 hypothetical protein LOC496330 X. laevis 61.7 94
NP_723567.1 S-adenosylmethionine decarboxylase, isoform B D. melanogaster 59.8 127
NP_493448.1 SAM Decarboxylase family member (smd-1) C. elegans 47.6 332

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; placenta; prostate; trachea; embryonic tissue; uterus; kidney; uncharacterized tissue; mixed; lung; thymus; blood; connective tissue; salivary gland; bone marrow; eye; spinal cord; adrenal gland; liver; mammary gland; muscle; lymph node; pituitary gland; skin; intestine; larynx; heart; stomach; pancreas; mouth; bladder; cervix; ovary; bone; lymph; vascular; esophagus; nerve; pharynx; ear; parathyroid; ascites; ganglia; spleen
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6q21-q22
UniSTS entry: Chr 6 GDB:192496
UniSTS entry: Chr 6 RH46841
UniSTS entry: Chr 6 D6S2429
UniSTS entry: Chr 6 RH98425
UniSTS entry: Chr 6 SGC30337
UniSTS entry: Chr 6 RH46760
UniSTS entry: Chr 6 STS-M88006
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (18)

BX640599.1 Homo sapiens mRNA; cDNA DKFZp686G18136 (from clone DKFZp686G18136) PA
AK130474.1 Homo sapiens cDNA FLJ26964 fis, clone SLV01056
NM_001634.4 Homo sapiens adenosylmethionine decarboxylase 1 (AMD1), transcript variant 1, mRNA P
M21154.1 Human S-adenosylmethionine decarboxylase mRNA, complete cds
CR611524.1 full-length cDNA clone CS0DI002YP09 of Placenta Cot 25-normalized of Homo sapiens (human)
CR610717.1 full-length cDNA clone CS0DL003YD11 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human)
CR604279.1 full-length cDNA clone CS0DI003YK06 of Placenta Cot 25-normalized of Homo sapiens (human)
CR599478.1 full-length cDNA clone CS0DC004YE20 of Neuroblastoma Cot 25-normalized of Homo sapiens (human)
NM_001033059.1 Homo sapiens adenosylmethionine decarboxylase 1 (AMD1), transcript variant 2, mRNA
BC000171.2 Homo sapiens adenosylmethionine decarboxylase 1, mRNA (cDNA clone MGC:5213 IMAGE:2900587), complete cds A
AJ420567.1 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 1572863 A
AJ420527.1 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 2097693 A
AL832698.1 Homo sapiens mRNA; cDNA DKFZp313L1234 (from clone DKFZp313L1234) PA
AK300330.1 Homo sapiens cDNA FLJ52754 complete cds, highly similar to S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) P
AK304351.1 Homo sapiens cDNA FLJ59608 complete cds, highly similar to S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)
AK302761.1 Homo sapiens cDNA FLJ52467 complete cds, highly similar to S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) P
AK026205.1 Homo sapiens cDNA: FLJ22552 fis, clone HSI01006 A
AK316471.1 Homo sapiens cDNA, FLJ79370 complete cds, highly similar to S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)

EST sequences (10 of 1156) [Show all sequences]

AA954714.1 Clone IMAGE:1572863 kidney 3' read A
AA960801.1 Clone IMAGE:1564565 mixed 3' read P
AA972445.1 Clone IMAGE:1579386 mixed 3' read A
AA991680.1 Clone IMAGE:1622009 embryonic tissue 3' read A
AI002153.1 Clone IMAGE:1619476 testis 3' read A
AI042585.1 Clone IMAGE:1665831 skin 3' read
AI077439.1 Clone IMAGE:1677500 mixed 3' read
AI091117.1 Clone IMAGE:1689798 mixed 3' read
AI142872.1 Clone IMAGE:1661116 mixed 3' read A
CB053197.1 Clone IMAGE:3290711 uncharacterized tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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