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T. D. Schneider, G. D. Stormo, L. Gold, and A. Ehrenfeucht.
Information content of binding sites on nucleotide sequences.
J. Mol. Biol., 188:415-431, 1986.
http://www.lecb.ncifcrf.gov/~toms/paper/schneider1986/.
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T. D. Schneider.
Information and entropy of patterns in genetic switches.
In G. J. Erickson and C. R. Smith, editors, Maximum-Entropy and
Bayesian Methods in Science and Engineering, volume 2, pages 147-154,
Dordrecht, The Netherlands, 1988. Kluwer Academic Publishers.
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T. D. Schneider and G. D. Stormo.
Excess information at bacteriophage T7 genomic promoters detected
by a random cloning technique.
Nucleic Acids Res., 17:659-674, 1989.
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T. D. Schneider and R. M. Stephens.
Sequence logos: A new way to display consensus sequences.
Nucleic Acids Res., 18:6097-6100, 1990.
http://www.lecb.ncifcrf.gov/~toms/paper/logopaper/.
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N. D. Herman and T. D. Schneider.
High information conservation implies that at least three proteins
bind independently to F plasmid incD repeats.
J. Bacteriol., 174:3558-3560, 1992.
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P. P. Papp, D. K. Chattoraj, and T. D. Schneider.
Information analysis of sequences that bind the replication initiator
RepA.
J. Mol. Biol., 233:219-230, 1993.
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R. M. Stephens and T. D. Schneider.
Features of spliceosome evolution and function inferred from an
analysis of the information at human splice sites.
J. Mol. Biol., 228:1124-1136, 1992.
http://www.lecb.ncifcrf.gov/~toms/paper/splice/.
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T. D. Schneider.
Sequence logos, machine/channel capacity, Maxwell's demon, and
molecular computers: a review of the theory of molecular machines.
Nanotechnology, 5:1-18, 1994.
http://www.lecb.ncifcrf.gov/~toms/paper/nano2/.
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P. K. Rogan and T. D. Schneider.
Using information content and base frequencies to distinguish
mutations from genetic polymorphisms in splice junction recognition sites.
Human Mutation, 6:74-76, 1995.
http://www.lecb.ncifcrf.gov/~toms/paper/colonsplice/.
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C. E. Shannon.
A mathematical theory of communication.
Bell System Tech. J., 27:379-423, 623-656, 1948.
http://cm.bell-labs.com/cm/ms/what/shannonday/paper.html.
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J. R. Pierce.
An Introduction to Information Theory: Symbols, Signals and
Noise.
Dover Publications, Inc., New York, second edition, 1980.
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W. Sacco, W. Copes, C. Sloyer, and R. Stark.
Information Theory: Saving Bits.
Janson Publications, Inc., Dedham, MA, 1988.
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N. J. A. Sloane and A. D. Wyner.
Claude Elwood Shannon: Collected Papers.
IEEE Press, Piscataway, NJ, 1993.
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Thomas M. Cover and Joy A. Thomas.
Elements of Information Theory.
John Wiley & Sons, Inc., N. Y., 1991.
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M. Tribus.
Thermostatics and Thermodynamics.
D. van Nostrand Company, Inc., Princeton, N. J., 1961.
Tom Schneider
2003-01-06