{ version = 1.02; (* of transpose.p 2007 Oct 13}
(* begin module describe.transpose *)
(*
name
transpose: transpose a matrix of integers
synopsis
transpose(fin: in, transposep: in, fout: out, output: out)
files
fin: A file containing fivei lines.
The first line is the name of the site. The remaining four
lines are the numbers of A, C, G and T
at each position in an aligned set of sequences. Words
in the file that do not begin with a number are dropped
fout: The transpose of the file with numbering in the first colum.
This output is ready for conversion to a Delila book by the freb
program.
transposep: parameters to control the program. The file must contain the
following parameters, one per line:
parameterversion: The version number of the program. This allows the
user to be warned if an old parameter file is used.
output: messages to the user
description
The purpose and use of the program.
examples
documentation
see also
freb.p
author
Thomas Dana Schneider
bugs
technical notes
The largest number of items in a row is given by constant maxstore.
*)
(* end module describe.transpose *)
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