Atlastin GTPase 3, Homo sapiens

Expression Profile:

View expression levels using UniGene's EST ProfileViewer
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Highly represented (1.5 pct) in cDNA library dbEST:7594, CI0127.

Highly represented (1.1 pct) in cDNA library dbEST:4907, NIH_MGC_5.

GEO profiles:

Gene expression profiles in the NCBI Gene Expression Omnibus database

cDNA Sources:

brain; testis; prostate; uterus; adipose tissue; intestine; uncharacterized tissue; vascular; mammary gland; pharynx; muscle; cervix; bladder; thyroid; lymph node; ovary; liver; skin; pancreas; lung; connective tissue; embryonic tissue; kidney; placenta; mixed; trachea; thymus; ear; blood; eye; bone; parathyroid; mouth; larynx; stomach; bone marrow; adrenal gland; ascites; lymph; esophagus; nerve

NCBI

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Finding cDNAs

UGID:195577 UniGene Hs.356719 Homo sapiens (human) ATL3

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Atlastin GTPase 3 (ATL3)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_056274.3	atlastin 3	H. sapiens	100.0	540
NP_666203.2	hypothetical protein LOC109168	M. musculus	96.1	540
NP_001006016.1	atlastin 3	D. rerio	76.6	491
NP_001086007.1	MGC83593 protein	X. laevis	73.0	537
NP_001023493.1	Y54G2A.2b	C. elegans	63.4	497
NP_651274.1	atlastin CG6668-PA, isoform A	D. melanogaster	61.6	490

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	11
Map position:	11q13.1
UniSTS entry:	Chr 11	A006Q18
UniSTS entry:	Chr 11	G27556
UniSTS entry:	Chr 11	RH12215
UniSTS entry:	Chr Y	L18426

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

NM_015459.3	Homo sapiens atlastin GTPase 3 (ATL3), mRNA	P
AL117600.1	Homo sapiens mRNA; cDNA DKFZp564J0863 (from clone DKFZp564J0863)	PA
BX648468.1	Homo sapiens mRNA; cDNA DKFZp686J05145 (from clone DKFZp686J05145)	A
BC077727.1	Homo sapiens atlastin 3, mRNA (cDNA clone MGC:78594 IMAGE:5952471), complete cds	PA
CR936784.1	Homo sapiens mRNA; cDNA DKFZp781F1886 (from clone DKFZp781F1886)	PA
AK023383.1	Homo sapiens cDNA FLJ13321 fis, clone OVARC1001703, weakly similar to Mus musculus ARL-6 interacting protein-2 (Aip-2) mRNA	P
AK097588.1	Homo sapiens cDNA FLJ40269 fis, clone TESTI2026597	P
AK094227.1	Homo sapiens cDNA FLJ36908 fis, clone BRACE2003825	A
AK090822.1	Homo sapiens cDNA FLJ33503 fis, clone BRAMY2004521
AK301910.1	Homo sapiens cDNA FLJ58636 complete cds, moderately similar to Atlastin	P

EST sequences (10 of 446) [Show all sequences]

AA987508.1	Clone IMAGE:1604326	lung	3' read
AA993634.1	Clone IMAGE:1621649	testis	3' read	PA
AA904788.1	Clone IMAGE:1504100	mixed	3' read
AI015093.1	Clone IMAGE:1640879	testis	3' read	A
AI040022.1	Clone IMAGE:1664310	skin	3' read	A
AI051512.1	Clone IMAGE:1659083	embryonic tissue	3' read	A
AI090120.1	Clone IMAGE:1697570	uterus	3' read
AI092575.1	Clone IMAGE:1683468	parathyroid	3' read	A
AI094788.1	Clone IMAGE:1687044	brain	3' read	A
CB053490.1	Clone IMAGE:3291017	uncharacterized tissue	5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria