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Finding cDNAs
UGID:1371611     UniGene Hs.535297     Homo sapiens (human)   ARID5B Links
AT rich interactive domain 5B (MRF1-like) (ARID5B)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_115575.1 AT rich interactive domain 5B (MRF1-like) H. sapiens 100.0 1187
XP_001165670.1 PREDICTED: AT rich interactive domain 5B (MRF1-like) isoform 3 P. troglodytes 99.8 1186
NP_001085069.1 hypothetical protein LOC432140 X. laevis 98.7 74
NP_076087.2 AT rich interactive domain 5B (Mrf1 like) M. musculus 93.5 1187
NP_476667.1 polyA-binding protein CG5119-PA, isoform A D. melanogaster 68.5 73
XP_691864.3 PREDICTED: similar to AT rich interactive domain 5B (Mrf1 like) (predicted) D. rerio 57.2 909

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: pancreas; cervix; esophagus; liver; larynx; placenta; bone marrow; uterus; embryonic tissue; brain; bladder; eye; intestine; ear; muscle; blood; pharynx; skin; mammary gland; kidney; lung; lymph node; uncharacterized tissue; ovary; prostate; mixed; vascular; heart; mouth; tonsil; thyroid; parathyroid; connective tissue; testis; stomach; trachea; nerve
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10q21.2
UniSTS entry: Chr 10 A003N19
UniSTS entry: Chr 10 RH47625
UniSTS entry: Chr 10 RH48313
UniSTS entry: Chr 10 (n/a)
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

AL049471.1 Homo sapiens mRNA; cDNA DKFZp586N012 (from clone DKFZp586N012) A
BX537690.1 Homo sapiens mRNA; cDNA DKFZp686E18111 (from clone DKFZp686E18111) PA
BX648835.1 Homo sapiens mRNA; cDNA DKFZp686H19148 (from clone DKFZp686H19148) PA
BX641020.1 Homo sapiens mRNA; cDNA DKFZp686G23148 (from clone DKFZp686G23148) PA
AK123882.1 Homo sapiens cDNA FLJ41888 fis, clone OCBBF2024463 P
BC056680.1 Homo sapiens AT rich interactive domain 5B (MRF1-like), mRNA (cDNA clone IMAGE:4248986), partial cds PA
BC066345.1 Homo sapiens AT rich interactive domain 5B (MRF1-like), mRNA (cDNA clone IMAGE:30345306), partial cds PA
CR596682.1 full-length cDNA clone CS0DJ006YB02 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) P
NM_032199.1 Homo sapiens AT rich interactive domain 5B (MRF1-like) (ARID5B), mRNA P
BC107800.1 Homo sapiens AT rich interactive domain 5B (MRF1-like), mRNA (cDNA clone IMAGE:4105813), partial cds PA
BC017404.1 Homo sapiens, clone IMAGE:4292351, mRNA A
AK296921.1 Homo sapiens cDNA FLJ60664 complete cds, highly similar to AT-rich interactive domain-containing protein5B P
BC036831.1 Homo sapiens AT rich interactive domain 5B (MRF1-like), mRNA (cDNA clone IMAGE:5529276), partial cds PA
BC015120.1 Homo sapiens AT rich interactive domain 5B (MRF1-like), mRNA (cDNA clone IMAGE:3681098), partial cds PA
AK024803.1 Homo sapiens cDNA: FLJ21150 fis, clone CAS09561 PA
M73837.1 Homo sapiens modulator recognition factor 2 (MRF-2) mRNA, partial cds P

EST sequences (10 of 285) [Show all sequences]

AI049610.1 Clone IMAGE:1700917 kidney 3' read A
AI052768.1 Clone IMAGE:1671981 uncharacterized tissue 3' read P
AI095137.1 Clone IMAGE:1687211 brain 3' read
AI127390.1 Clone IMAGE:1705492 heart 3' read A
CB052020.1 Clone IMAGE:3290152 uncharacterized tissue 3' read PA
CB052021.1 Clone IMAGE:3290152 uncharacterized tissue 5' read P
AI149153.1 Clone IMAGE:1715089 placenta 3' read A
BX105043.1 Clone IMAGp998K24258_;_IMAGE:160655 mammary gland
BX101098.1 Clone IMAGp998L241012_;_IMAGE:431015 mixed A
BX104663.1 Clone IMAGp998J071170_;_IMAGE:491622 uterus P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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