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UGID:180871     UniGene Hs.298990     Homo sapiens (human)   SMARCA2 Links
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SMARCA2)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_850159.1 PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform a isoform 2 C. lupus familiaris 99.5 1573
NP_001122316.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform B H. sapiens 86.5 1646
NP_730088.1 brahma CG5942-PD, isoform D D. melanogaster 66.7 1584
NP_850847.1 CHR17 (CHROMATIN REMODELING FACTOR17); DNA-dependent ATPase A. thaliana 48.5 639
XP_957128.1 SNF2-family ATP dependent chromatin remodeling factor snf21 N. crassa 45.9 1364

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: brain; mixed; mammary gland; eye; placenta; spinal cord; testis; thymus; embryonic tissue; cervix; muscle; stomach; spleen; skin; pancreas; lung; uncharacterized tissue; parathyroid; ovary; uterus; adrenal gland; connective tissue; heart; kidney; bone; trachea; lymph; ganglia; lymph node; prostate; bladder; pharynx; liver; blood; intestine; mouth; thyroid; vascular; pituitary gland; ear; adipose tissue; ascites
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9p22.3
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

AY293824.1 Homo sapiens SMARCA2 mRNA, partial sequence P
AY295762.1 Homo sapiens SMARCA2 mRNA, partial sequence
NM_003070.3 Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SMARCA2), transcript variant 1, mRNA P
BC068252.1 Homo sapiens cDNA clone IMAGE:4822434, containing frame-shift errors PA
CR595322.1 full-length cDNA clone CS0DJ015YK07 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) P
CR591550.1 full-length cDNA clone CS0DL006YH05 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) P
AK308941.1 Homo sapiens cDNA, FLJ98982
NM_139045.2 Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SMARCA2), transcript variant 2, mRNA P
AK094076.1 Homo sapiens cDNA FLJ36757 fis, clone UTERU2018522, highly similar to Human mRNA for transcriptional activator hSNF2a P
AK300093.1 Homo sapiens cDNA FLJ59976 complete cds, highly similar to Probable global transcription activator SNF2L2 (EC 3.6.1.-)
AK299683.1 Homo sapiens cDNA FLJ53181 partial cds, highly similar to Probable global transcription activator SNF2L2 (EC 3.6.1.-)
AK298045.1 Homo sapiens cDNA FLJ61143 complete cds, highly similar to Probable global transcription activator SNF2L2 (EC 3.6.1.-)
AK296373.1 Homo sapiens cDNA FLJ61591 partial cds, highly similar to Probable global transcription activator SNF2L2 (EC 3.6.1.-) A
X72889.1 H.sapiens hbrm mRNA PA
BC040029.1 Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, mRNA (cDNA clone IMAGE:5752305), partial cds P

EST sequences (10 of 511) [Show all sequences]

R14313.1 Clone IMAGE:28680 brain 5' read P
AA970877.1 Clone IMAGE:1576545 intestine 3' read A
AA995543.1 Clone IMAGE:1606666 kidney 3' read P
AA905794.1 Clone IMAGE:1505078 mixed 3' read P
AA922187.1 Clone IMAGE:1544054 mixed 3' read A
AI057088.1 Clone IMAGE:1676196 embryonic tissue 3' read P
AI074028.1 Clone IMAGE:1670839 uncharacterized tissue 3' read P
AI081778.1 Clone IMAGE:1661999 mixed 3' read P
AI097564.1 Clone IMAGE:1685826 brain 3' read P
AI123475.1 Clone IMAGE:1640707 testis 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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