title "version = 2.00 of gal4.inst 2001 June 2, GAL4 Binding Sites";
(* 2.00, 2001 Jun 2: upgrade to modern form *)
(* final version by Mark Shaner: 1992 June 14 *)

(* Instructions for GAL4, a positive regulatory protein in the yeast
   Saccharomyces cerevisiae

Sequences in both directions

All sites taken from Bram1986

*)

default out-of-range reduce-range;
default numbering piece;

organism S.cerevisiae;
chromosome S.cerevisiae;


(* locus YSCGAL2A *)
piece M81879;
(* get from 225 - 20 to 225 + 20;
   get from 225 + 20 to 225 - 20; REMOVED because site is a guess *)
get from 339 - 20 to 339 + 20; (* DNase I footprints: Bram1986 *)
get from 339 + 20 to 339 - 20; (* DNase I footprints: Bram1986 *)
(* get from 358 - 20 to 358 + 20;
   get from 358 + 20 to 358 - 20; REMOVED because site is a guess *)
get from 422 - 20 to 422 + 20; (* DNase I footprints: Bram1986 *)
get from 422 + 20 to 422 - 20; (* DNase I footprints: Bram1986 *)
(* get from 427 - 20 to 427 + 20;
   get from 427 + 20 to 427 - 20; REMOVED because site is a guess *)


(* GAL1&GAL10 *)
(* locus YSCGAL *)
piece K02115;

get from 376 - 100 to 376 + 100; (* DNase I footprints: Bram1986 *)
get from 376 + 100 to 376 - 100; (* DNase I footprints: Bram1986 *)
get from 395 - 100 to 395 + 100; (* DNase I-protection: Bram1985 *)
get from 395 + 100 to 395 - 100; (* DNase I-protection: Bram1985 *)
get from 413 - 100 to 413 + 100; (* DNase I footprints: Bram1986 *)
get from 413 + 100 to 413 - 100; (* DNase I footprints: Bram1986 *)
get from 477 - 100 to 477 + 100; (* DNase I-protection: Bram1985 *)
get from 477 + 100 to 477 - 100; (* DNase I-protection: Bram1985 *)


(* locus YSCGAL7 *)
piece M12348;

get from 667 - 100 to 667 + 100; (* DNase I-protection: Bram1985 *)
get from 667 + 100 to 667 - 100; (* DNase I-protection: Bram1985 *)
get from 754 - 100 to 754 + 100; (* DNase I-protection: Bram1985 *)
get from 754 + 100 to 754 - 100; (* DNase I-protection: Bram1985 *)
get from 761 - 100 to 761 + 100; (* DNase I footprints: Bram1986 *)
get from 761 + 100 to 761 - 100; (* DNase I footprints: Bram1986 *)


(* locus YSCGAL80G *)
piece X01667;

get from 569 - 100 to 569 + 100; (* DNase I footprints: Bram1986 *)
get from 569 + 100 to 569 - 100; (* DNase I footprints: Bram1986 *)


(* locus YSCMEL1 *)
piece X03102;

get from 216 - 100 to 216 + 100; (* DNase I footprints: Bram1986 *)
get from 216 + 100 to 216 - 100; (* DNase I footprints: Bram1986 *)