Coiled-coil domain containing 72, Homo sapiens

Expression Profile:

View expression levels using UniGene's EST ProfileViewer
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Highly represented (11.0 pct) in cDNA library dbEST:4159, UM0018.

Highly represented (4.3 pct) in cDNA library dbEST:4398, OT0019.

Highly represented (1.4 pct) in cDNA library dbEST:4486, NN0039.

GEO profiles:

Gene expression profiles in the NCBI Gene Expression Omnibus database

cDNA Sources:

mixed; brain; uterus; lung; embryonic tissue; heart; bone marrow; stomach; spinal cord; adrenal gland; kidney; prostate; umbilical cord; mammary gland; skin; blood; pancreas; uncharacterized tissue; lymph node; ovary; intestine; liver; muscle; eye; testis; placenta; vascular; pituitary gland; pharynx; parathyroid; mouth; ear; connective tissue; cervix; thymus; bone; ascites; esophagus; thyroid; tonsil; nerve; pineal gland

NCBI

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Finding cDNAs

UGID:195470 UniGene Hs.356440 Homo sapiens (human) CCDC72

Order cDNA clone, Links

Coiled-coil domain containing 72 (CCDC72)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
XP_001055910.1	PREDICTED: hypothetical protein isoform 2	R. norvegicus	100.0	63
XP_001096995.1	PREDICTED: hypothetical protein	M. mulatta	100.0	63
XP_543865.2	PREDICTED: hypothetical protein XP_543865	C. lupus familiaris	100.0	63
XP_884314.1	PREDICTED: hypothetical protein	B. taurus	100.0	63
XP_001724308.1	PREDICTED: hypothetical protein	H. sapiens	97.1	69
XP_907877.1	PREDICTED: hypothetical protein	M. musculus	93.9	81
NP_001080392.1	ARP3 actin-related protein 3 homolog	X. laevis	86.5	89
XP_001923154.1	PREDICTED: zgc:153700	D. rerio	82.8	63
NP_652500.1	CG13364 CG13364-PA	D. melanogaster	75.0	63
NP_491066.1	Y71F9AL.16	C. elegans	68.7	83
NP_012599.1	Essential component of the Arp2/3 complex, which is a highly conserved actin nucleation center required for the motility and integrity of actin patches; involved in endocytosis and membrane growth and polarity; Arp3p	S. cerevisiae	64.1	78
NP_172777.1	DIS1 (DISTORTED TRICHOMES 1); structural constituent of cytoskeleton	A. thaliana	62.5	80
XP_328195.1	ACTIN-LIKE PROTEIN 3	N. crassa	61.0	82

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	3
Map position:	3p21.31
UniSTS entry:	Chr 3	RH79795
UniSTS entry:	Chr Y	D8S2279

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AK126594.1	Homo sapiens cDNA FLJ44631 fis, clone BRACE2018443	P
AY508979.1	Homo sapiens unknown protein (HSPC016) mRNA, complete cds	PA
BC066333.1	Homo sapiens cDNA clone IMAGE:4799207, partial cds	PA
NM_015933.3	Homo sapiens coiled-coil domain containing 72 (CCDC72), mRNA	PA
BC080531.1	Homo sapiens coiled-coil domain containing 72, mRNA (cDNA clone MGC:99630 IMAGE:4875991), complete cds	PA
AY794023.1	Homo sapiens HSPC016 protein (HSPC016) mRNA, complete cds	PA
BC001102.2	Homo sapiens coiled-coil domain containing 72, mRNA (cDNA clone IMAGE:2823852)	PA
AF161448.1	Homo sapiens HSPC330 mRNA, partial cds	PA
AF077202.1	Homo sapiens HSPC016 mRNA, complete cds	P

EST sequences (10 of 665) [Show all sequences]

AA736750.1	Clone IMAGE:1305393	lymph node		PA
AA984586.1	Clone IMAGE:1630279	brain	3' read	P
AA995593.1	Clone IMAGE:1606127	kidney	3' read	A
AA996174.1	Clone IMAGE:1606534	kidney	3' read	A
AA910393.1	Clone IMAGE:1521124	lung	3' read	P
AI022462.1	Clone IMAGE:1650218	parathyroid	3' read	PA
AI023042.1	Clone IMAGE:1651677	skin	3' read
AI023043.1	Clone IMAGE:1651679	skin	3' read
AI026809.1	Clone IMAGE:1645319	testis	3' read	PA
AI031903.1	Clone IMAGE:1649986	parathyroid	3' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria