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Experiment: Alterations in Gene Expression Profiles during Prostate Cancer Progression

GENERAL EXPERIMENT INFORMATION Help
Title: Alterations in Gene Expression Profiles during Prostate Cancer Progression 
Identifier: gov.nih.nci.ncicb.caarray:Experiment:1015897540503881:1 
Experiment Date: 1/1/01 
Experiment Design Type development_or_differentiation_design,   disease_state_design,   cell_type_comparison_design,   cellular_process_design,   reference_design,  
Visibility Public  
Description/Goal of the experiment: To identify molecular changes that occur during prostate tumor progression, we have characterized a series of prostate cancer cell lines isolated at different stages of tumorigenesis from C3(1)/Tag transgenic mice. 

CONTACTS Help
Principal Investigator: Jeffrey E Green
Contact Person: Alfonso Calvo

HYBRIDIZATION FILE UPLOAD Help

HYBRIDIZATION FILES BATCH DOWNLOAD Help
GPR Files    
Note: Do not download files immediately after uploading hybridization files. The application needs some time to process files.

ADDITIONAL DATA PROCESSING (DERIVED MEASUREMENTS) Help
# DataTransformation Protocol Protocol Description Uploaded files Action

ADDITIONAL UPLOADED FILES Help
# File Description Action
Calvo_spotted_sample.txt Sample information.  Download
array_info1.txt Array information.  Download

EXPERIMENTAL FACTORS/VARIABLES Help
Factor Factor Type Scale Factor Value
Pr117  cell_line  unscaled
10 ug
non
Pr14  cell_line  unscaled
10 ug
non
Pr14C2  cell_line  unscaled
10 ug
non
Pr14C1  cell_line  unscaled
10 ug
non
Pr111 reference  cell_line  unscaled
10 ug
non
Cell Line  cell_line  unscaled
Pr117
Pr14
Pr14C2
Pr14C1
Pr111 reference

PUBLICATIONS Help
PubMed ID Title Authors Publication
12235003 Alterations in gene expression profiles during prostate cancer progression Calvo A, Xiao N, Kang J, Best CJ, Leiva I, Emmert-Buck MR, Jorcyk C, Green JE Cancer Research

QUALITY CONTROL STEPS DESCRIPTION Help
Quality Control Description Type(s): technical_replicate 
Description: Real-Time RT-PCR
ADDITIONAL QUALIFIERS Help
Qualifier name: Value: Source

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