Trinucleotide repeat containing 6A (TNRC6A)

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UGID:2724375 UniGene Hs.655057 Homo sapiens (human) TNRC6A

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Trinucleotide repeat containing 6A (TNRC6A)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
XP_510885.2	PREDICTED: trinucleotide repeat containing 6A	P. troglodytes	99.9	1862
NP_659174.3	trinucleotide repeat containing 6A	M. musculus	95.2	1895
NP_001136112.1	trinucleotide repeat containing 6C isoform 1	H. sapiens	49.8	1723

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; mixed; embryonic tissue; lung; connective tissue; thyroid; larynx; uterus; spleen; pharynx; skin; pancreas; placenta; intestine; kidney; testis; prostate; uncharacterized tissue; parathyroid; mammary gland; mouth; ovary; thymus; epididymis; bone; bladder; trachea; blood; lymph; ear; eye; heart; liver; vascular; adrenal gland; lymph node; muscle; pituitary gland; nerve; adipose tissue; cervix

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	16
Map position:	16p11.2
UniSTS entry:	Chr 16	SHGC-61076
UniSTS entry:	Chr 16	(n/a)
UniSTS entry:	Chr 16	L17913
UniSTS entry:	Chr 22	(n/a)
UniSTS entry:		SHGC-61178
UniSTS entry:	Chr 22	sY3084
UniSTS entry:	Chr 22	D8S2278
UniSTS entry:	Chr 22	GDB:335751
UniSTS entry:	Chr 22	L18426
UniSTS entry:	Chr 22	D8S2279

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

BC068209.1	Homo sapiens trinucleotide repeat containing 6A, mRNA (cDNA clone IMAGE:6197151)	PA
AK001773.1	Homo sapiens cDNA FLJ10911 fis, clone OVARC1000148	P
AB040893.1	Homo sapiens mRNA for KIAA1460 protein, partial cds	P
AK025277.1	Homo sapiens cDNA: FLJ21624 fis, clone COL08006	A
AK025696.1	Homo sapiens cDNA: FLJ22043 fis, clone HEP09131	PA
BC024324.1	Homo sapiens trinucleotide repeat containing 6A, mRNA (cDNA clone IMAGE:4427559), partial cds	A
AL713750.1	Homo sapiens mRNA; cDNA DKFZp566M143 (from clone DKFZp566M143)	PA
AY035864.1	Homo sapiens GW182 autoantigen (GW1) mRNA, complete cds	P
NM_014494.2	Homo sapiens trinucleotide repeat containing 6A (TNRC6A), mRNA	PA
AJ492221.1	Homo sapiens mRNA for EDIE protein (KIAA1460 gene)	P
AK094542.1	Homo sapiens cDNA FLJ37223 fis, clone BRAMY1000157, highly similar to Trinucleotide repeat-containing gene 6A protein	P
AL833757.1	Homo sapiens mRNA; cDNA DKFZp666E117 (from clone DKFZp666E117)	PA
AK299905.1	Homo sapiens cDNA FLJ59141 complete cds, highly similar to Trinucleotide repeat-containing gene 6A protein	P
U23860.1	Human clone mcag19 chromosome 16 CTG repeat region	P

EST sequences (10 of 308) [Show all sequences]

AA910469.1	Clone IMAGE:1505619	mixed	3' read	A
AA985055.1	Clone IMAGE:1577317	spleen	3' read	A
AA999988.1	Clone IMAGE:1636558	kidney	3' read	A
AI016937.1	Clone IMAGE:1639153	testis	3' read
AI051010.1	Clone IMAGE:1648994	parathyroid	3' read	PA
AI052220.1	Clone IMAGE:1675309	mixed	3' read
AI124929.1	Clone IMAGE:1726455	vascular	3' read
AI126867.1	Clone IMAGE:1707825	heart	3' read	A
AI146313.1	Clone IMAGE:1685691	brain	3' read	A
CB048646.1	Clone IMAGE:3270807	prostate	5' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria