NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:307676     UniGene Mm.208465     Mus musculus (mouse)   Ccdc53 Order cDNA clone, Links
Coiled-coil domain containing 53 (Ccdc53)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001155894.1 PREDICTED: coiled-coil domain containing 53 isoform 2 P. troglodytes 95.8 168

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: mammary gland; embryonic tissue; testis; mixed; brain; thymus; intestine; lung; extraembryonic tissue; bone marrow; eye; thyroid; tongue; heart; liver; connective tissue; fertilized ovum; lymph node; muscle; kidney; uncharacterized tissue; stomach; skin; spleen; bone; pancreas; blood; pituitary gland; inner ear
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10 C2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AK028599.1 Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732410B12 product:unclassifiable, full insert sequence P
AK158822.1 Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K430337B09 product:Protein AD-016 (CGI-116) (x0009) homolog [Homo sapiens], full insert sequence P
NM_001122960.1 Mus musculus coiled-coil domain containing 53 (Ccdc53), transcript variant 2, mRNA
NM_027487.1 Mus musculus coiled-coil domain containing 53 (Ccdc53), transcript variant 3, mRNA A
AK017732.1 Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730495F03 product:RIKEN cDNA 5730495F03 gene, full insert sequence P
AK013835.1 Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900091E11 product:PROTEIN AD-016 (PROTEIN CGI-116) (X0009) homolog [Homo sapiens], full insert sequence P
AK009358.1 Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310015H13 product:PROTEIN AD-016 (PROTEIN CGI-116) (X0009) homolog [Homo sapiens], full insert sequence P
AK004206.1 Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110048P22 product:Protein AD-016 (CGI-116) (x0009) homolog [Homo sapiens], full insert sequence P
NM_026070.3 Mus musculus coiled-coil domain containing 53 (Ccdc53), transcript variant 1, mRNA
BC029256.1 Mus musculus coiled-coil domain containing 53, mRNA (cDNA clone MGC:36318 IMAGE:3661472), complete cds PA

EST sequences (10 of 178) [Show all sequences]

CA575511.1 Clone NIA:K0631G10_IMAGE:30071793 bone marrow 5' read P
BY014997.1 Clone G730049B04 lung 5' read P
BY054984.1 Clone I730080I20 mixed 5' read P
BY074065.1 Clone I920093B06 stomach 5' read P
BY079846.1 Clone K630021G17 testis 5' read P
BY070322.1 Clone I920072F10 mixed 5' read P
BY077855.1 Clone K630011N20 thymus 5' read P
BY098968.1 Clone K630125G14 mixed 5' read P
BY100774.1 Clone K630134I04 thymus 5' read
BY100776.1 Clone K630134I06 thymus 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help