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java.lang.Objectorg.biomage.Common.Extendable
org.biomage.Common.Describable
org.biomage.Common.Identifiable
org.biomage.BioAssayData.QuantitationTypeDimension
public class QuantitationTypeDimension
An ordered list of quantitationTypes.
Nested Class Summary |
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Nested classes/interfaces inherited from interface org.biomage.Interface.HasQuantitationTypes |
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HasQuantitationTypes.QuantitationTypes_list |
Nested classes/interfaces inherited from interface org.biomage.Interface.HasAuditTrail |
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HasAuditTrail.AuditTrail_list |
Nested classes/interfaces inherited from interface org.biomage.Interface.HasDescriptions |
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HasDescriptions.Descriptions_list |
Nested classes/interfaces inherited from interface org.biomage.Interface.HasPropertySets |
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HasPropertySets.PropertySets_list |
Field Summary | |
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protected java.util.List |
quantitationTypes
The QuantitationTypes for this Dimension. |
Fields inherited from class org.biomage.Common.Describable |
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security |
Fields inherited from class org.biomage.Common.Extendable |
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editable, id, securedElementId |
Constructor Summary | |
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QuantitationTypeDimension()
Default constructor. |
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QuantitationTypeDimension(org.xml.sax.Attributes atts)
Attribute constructor. |
Method Summary | |
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void |
addToQuantitationTypes(int position,
QuantitationType quantitationType)
Method to add QuantitationType at position to QuantitationTypes_list |
void |
addToQuantitationTypes(QuantitationType quantitationType)
Method to add QuantitationType to QuantitationTypes_list |
boolean |
emptyMAGEobject()
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QuantitationType |
getFromQuantitationTypes(int position)
Method to get QuantitationType from QuantitationTypes_list |
java.lang.String |
getModelClassName()
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HasQuantitationTypes.QuantitationTypes_list |
getQuantitationTypes()
Get method for quantitationTypes |
void |
removeElementAtFromQuantitationTypes(int position)
Method to remove by position from QuantitationTypes_list |
void |
removeFromQuantitationTypes(QuantitationType quantitationType)
Method to remove first QuantitationType from QuantitationTypes_list |
void |
setAttributes(org.xml.sax.Attributes atts)
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void |
setQuantitationTypes(HasQuantitationTypes.QuantitationTypes_list quantitationTypes)
Set method for quantitationTypes |
void |
writeAssociations(java.io.Writer out)
writeAssociations This method is responsible for assembling the association data into XML. |
void |
writeAttributes(java.io.Writer out)
writeAttributes This method is responsible for assembling the attribute data into XML. |
void |
writeMAGEML(java.io.Writer out)
writeMAGEML This method is responsible for assembling the attribute and association data into XML. |
Methods inherited from class org.biomage.Common.Identifiable |
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getIdentifier, getName, setIdentifier, setName, toString |
Methods inherited from class org.biomage.Common.Describable |
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addToAuditTrail, addToAuditTrail, addToDescriptions, addToDescriptions, getAuditTrail, getDescriptions, getFromAuditTrail, getFromDescriptions, getSecurity, removeElementAtFromAuditTrail, removeElementAtFromDescriptions, removeFromAuditTrail, removeFromDescriptions, setAuditTrail, setDescriptions, setSecurity |
Methods inherited from class org.biomage.Common.Extendable |
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addToPropertySets, addToPropertySets, equals, getFromPropertySets, getId, getIsEditable, getPropertySets, getSecuredElementId, isEditable, removeElementAtFromPropertySets, removeFromPropertySets, setId, setIsEditable, setPropertySets, setSecuredElementId |
Methods inherited from class java.lang.Object |
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clone, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
Field Detail |
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protected java.util.List quantitationTypes
Constructor Detail |
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public QuantitationTypeDimension()
public QuantitationTypeDimension(org.xml.sax.Attributes atts)
atts:
- the attribute list.Method Detail |
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public void setAttributes(org.xml.sax.Attributes atts)
setAttributes
in class Identifiable
public void writeMAGEML(java.io.Writer out) throws java.io.IOException
writeMAGEML
in class Identifiable
java.io.IOException
public boolean emptyMAGEobject()
public void writeAttributes(java.io.Writer out) throws java.io.IOException
writeAttributes
in class Identifiable
java.io.IOException
public void writeAssociations(java.io.Writer out) throws java.io.IOException
writeAssociations
in class Identifiable
java.io.IOException
public java.lang.String getModelClassName()
getModelClassName
in class Identifiable
public void setQuantitationTypes(HasQuantitationTypes.QuantitationTypes_list quantitationTypes)
setQuantitationTypes
in interface HasQuantitationTypes
value
- to setpublic HasQuantitationTypes.QuantitationTypes_list getQuantitationTypes()
getQuantitationTypes
in interface HasQuantitationTypes
public void addToQuantitationTypes(QuantitationType quantitationType)
addToQuantitationTypes
in interface HasQuantitationTypes
public void addToQuantitationTypes(int position, QuantitationType quantitationType)
addToQuantitationTypes
in interface HasQuantitationTypes
public QuantitationType getFromQuantitationTypes(int position)
getFromQuantitationTypes
in interface HasQuantitationTypes
public void removeElementAtFromQuantitationTypes(int position)
removeElementAtFromQuantitationTypes
in interface HasQuantitationTypes
public void removeFromQuantitationTypes(QuantitationType quantitationType)
removeFromQuantitationTypes
in interface HasQuantitationTypes
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