gov.nih.nci.caarray.services.fileparse2.hybridization
Class BioDataCubeCreator

java.lang.Object
  extended by gov.nih.nci.caarray.services.fileparse2.hybridization.BioDataCubeCreator

public class BioDataCubeCreator
extends java.lang.Object

A class used to create cubes from data matrices

Author:
gustafsons, tranp

Field Summary
protected static org.apache.log4j.Logger logger_
          Logger used by an instance of this class.
 
Constructor Summary
BioDataCubeCreator(SimpleQuantitationType[] quantTypes, SimpleDesignElement[] designElements, int numberOfBioAssays)
          Constructor to initialize the cube to it's needed values
 
Method Summary
 void addMatrix(DataMatrix matrix)
          Adds a data matrix to the cube
 java.lang.Object[][][] getCube()
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

logger_

protected static org.apache.log4j.Logger logger_
Logger used by an instance of this class.

Constructor Detail

BioDataCubeCreator

public BioDataCubeCreator(SimpleQuantitationType[] quantTypes,
                          SimpleDesignElement[] designElements,
                          int numberOfBioAssays)
Constructor to initialize the cube to it's needed values

Parameters:
quantTypes -
designElements -
numberOfBioAssays -
Method Detail

addMatrix

public void addMatrix(DataMatrix matrix)
Adds a data matrix to the cube

Parameters:
matrix -

getCube

public java.lang.Object[][][] getCube()
Returns:
Returns the cube.