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java.lang.Objectgov.nih.nci.caarray.services.bioassaydata.reader.AbstractDataFileReader
gov.nih.nci.caarray.services.bioassaydata.reader.AbstractIlluminaCsvReader
public abstract class AbstractIlluminaCsvReader
Reader for both row and column oriented Illumina CSV data. A potential refactoring for clarity is to split this into two subclasses for each format to remove the conditional logic based on isColumnOriented.
Method Summary | |
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static AbstractIlluminaCsvReader |
create(java.io.File dataFile)
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abstract java.lang.String |
getGroupId()
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abstract java.lang.String |
getTargetId()
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Methods inherited from class gov.nih.nci.caarray.services.bioassaydata.reader.AbstractDataFileReader |
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getErrors, getQuantitationTypeDescriptors, getValue, next, reset |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Method Detail |
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public static AbstractIlluminaCsvReader create(java.io.File dataFile) throws DataFileParseException
DataFileParseException
public abstract java.lang.String getTargetId()
public abstract java.lang.String getGroupId()
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