org.biomage.Array
Class PositionDelta

java.lang.Object
  extended by org.biomage.Common.Extendable
      extended by org.biomage.Array.PositionDelta
All Implemented Interfaces:
SecuredElementItf, java.io.Serializable, HasDistanceUnit, HasPropertySets

public class PositionDelta
extends Extendable
implements java.io.Serializable, HasDistanceUnit

The delta the feature was actually printed on the array from the position specified for the feature in the array design.

See Also:
Serialized Form

Nested Class Summary
 
Nested classes/interfaces inherited from interface org.biomage.Interface.HasPropertySets
HasPropertySets.PropertySets_list
 
Field Summary
protected  DistanceUnit distanceUnit
          The unit for the attributes.
 
Fields inherited from class org.biomage.Common.Extendable
editable, id, securedElementId
 
Constructor Summary
PositionDelta()
          Default constructor.
PositionDelta(org.xml.sax.Attributes atts)
          Attribute constructor.
 
Method Summary
 boolean emptyMAGEobject()
           
 java.lang.Float getDeltaX()
          Get method for deltaX
 java.lang.Float getDeltaY()
          Get method for deltaY
 DistanceUnit getDistanceUnit()
          Get method for distanceUnit
 java.lang.String getModelClassName()
           
 void setDeltaX(java.lang.Float deltaX)
          Set method for deltaX
 void setDeltaY(java.lang.Float deltaY)
          Set method for deltaY
 void setDistanceUnit(DistanceUnit distanceUnit)
          Set method for distanceUnit
 void writeAssociations(java.io.Writer out)
          writeAssociations This method is responsible for assembling the association data into XML.
 void writeAttributes(java.io.Writer out)
          writeAttributes This method is responsible for assembling the attribute data into XML.
 void writeMAGEML(java.io.Writer out)
          writeMAGEML This method is responsible for assembling the attribute and association data into XML.
 
Methods inherited from class org.biomage.Common.Extendable
addToPropertySets, addToPropertySets, equals, getFromPropertySets, getId, getIsEditable, getPropertySets, getSecuredElementId, isEditable, removeElementAtFromPropertySets, removeFromPropertySets, setAttributes, setId, setIsEditable, setPropertySets, setSecuredElementId, toString
 
Methods inherited from class java.lang.Object
clone, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Field Detail

distanceUnit

protected DistanceUnit distanceUnit
The unit for the attributes.

Constructor Detail

PositionDelta

public PositionDelta()
Default constructor.


PositionDelta

public PositionDelta(org.xml.sax.Attributes atts)
Attribute constructor. Looks up the attributes in the parameter and casts them from strings appropriately

Parameters:
atts: - the attribute list.
Method Detail

writeMAGEML

public void writeMAGEML(java.io.Writer out)
                 throws java.io.IOException
writeMAGEML This method is responsible for assembling the attribute and association data into XML. It creates the object tag and then calls the writeAttributes and writeAssociation methods.

Overrides:
writeMAGEML in class Extendable
Throws:
java.io.IOException

emptyMAGEobject

public boolean emptyMAGEobject()

writeAttributes

public void writeAttributes(java.io.Writer out)
                     throws java.io.IOException
writeAttributes This method is responsible for assembling the attribute data into XML. It calls the super method to write out all attributes of this class and it's ancestors.

Overrides:
writeAttributes in class Extendable
Throws:
java.io.IOException

writeAssociations

public void writeAssociations(java.io.Writer out)
                       throws java.io.IOException
writeAssociations This method is responsible for assembling the association data into XML. It calls the super method to write out all associations of this class's ancestors.

Overrides:
writeAssociations in class Extendable
Throws:
java.io.IOException

setDeltaX

public void setDeltaX(java.lang.Float deltaX)
Set method for deltaX

Parameters:
value - to set

getDeltaX

public java.lang.Float getDeltaX()
Get method for deltaX

Returns:
value of the attribute

setDeltaY

public void setDeltaY(java.lang.Float deltaY)
Set method for deltaY

Parameters:
value - to set

getDeltaY

public java.lang.Float getDeltaY()
Get method for deltaY

Returns:
value of the attribute

getModelClassName

public java.lang.String getModelClassName()
Overrides:
getModelClassName in class Extendable

setDistanceUnit

public void setDistanceUnit(DistanceUnit distanceUnit)
Set method for distanceUnit

Specified by:
setDistanceUnit in interface HasDistanceUnit
Parameters:
value - to set

getDistanceUnit

public DistanceUnit getDistanceUnit()
Get method for distanceUnit

Specified by:
getDistanceUnit in interface HasDistanceUnit
Returns:
value of the attribute