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java.lang.Objectorg.biomage.Common.Extendable
org.biomage.Common.Describable
org.biomage.Common.Identifiable
org.biomage.ArrayDesign.Zone
public class Zone
Specifies the location of a zone on an array.
Nested Class Summary |
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Nested classes/interfaces inherited from interface org.biomage.Interface.HasAuditTrail |
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HasAuditTrail.AuditTrail_list |
Nested classes/interfaces inherited from interface org.biomage.Interface.HasDescriptions |
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HasDescriptions.Descriptions_list |
Nested classes/interfaces inherited from interface org.biomage.Interface.HasPropertySets |
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HasPropertySets.PropertySets_list |
Field Summary | |
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protected DistanceUnit |
distanceUnit
Unit for the Zone attributes. |
Fields inherited from class org.biomage.Common.Describable |
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security |
Fields inherited from class org.biomage.Common.Extendable |
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editable, id, securedElementId |
Constructor Summary | |
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Zone()
Default constructor. |
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Zone(org.xml.sax.Attributes atts)
Attribute constructor. |
Method Summary | |
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boolean |
emptyMAGEobject()
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java.lang.Integer |
getColumn()
Get method for column |
DistanceUnit |
getDistanceUnit()
Get method for distanceUnit |
java.lang.Float |
getLowerRightX()
Get method for lowerRightX |
java.lang.Float |
getLowerRightY()
Get method for lowerRightY |
java.lang.String |
getModelClassName()
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java.lang.Integer |
getRow()
Get method for row |
java.lang.Float |
getUpperLeftX()
Get method for upperLeftX |
java.lang.Float |
getUpperLeftY()
Get method for upperLeftY |
void |
setAttributes(org.xml.sax.Attributes atts)
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void |
setColumn(java.lang.Integer column)
Set method for column |
void |
setDistanceUnit(DistanceUnit distanceUnit)
Set method for distanceUnit |
void |
setLowerRightX(java.lang.Float lowerRightX)
Set method for lowerRightX |
void |
setLowerRightY(java.lang.Float lowerRightY)
Set method for lowerRightY |
void |
setRow(java.lang.Integer row)
Set method for row |
void |
setUpperLeftX(java.lang.Float upperLeftX)
Set method for upperLeftX |
void |
setUpperLeftY(java.lang.Float upperLeftY)
Set method for upperLeftY |
void |
writeAssociations(java.io.Writer out)
writeAssociations This method is responsible for assembling the association data into XML. |
void |
writeAttributes(java.io.Writer out)
writeAttributes This method is responsible for assembling the attribute data into XML. |
void |
writeMAGEML(java.io.Writer out)
writeMAGEML This method is responsible for assembling the attribute and association data into XML. |
Methods inherited from class org.biomage.Common.Identifiable |
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getIdentifier, getName, setIdentifier, setName, toString |
Methods inherited from class org.biomage.Common.Describable |
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addToAuditTrail, addToAuditTrail, addToDescriptions, addToDescriptions, getAuditTrail, getDescriptions, getFromAuditTrail, getFromDescriptions, getSecurity, removeElementAtFromAuditTrail, removeElementAtFromDescriptions, removeFromAuditTrail, removeFromDescriptions, setAuditTrail, setDescriptions, setSecurity |
Methods inherited from class org.biomage.Common.Extendable |
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addToPropertySets, addToPropertySets, equals, getFromPropertySets, getId, getIsEditable, getPropertySets, getSecuredElementId, isEditable, removeElementAtFromPropertySets, removeFromPropertySets, setId, setIsEditable, setPropertySets, setSecuredElementId |
Methods inherited from class java.lang.Object |
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clone, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
Field Detail |
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protected DistanceUnit distanceUnit
Constructor Detail |
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public Zone()
public Zone(org.xml.sax.Attributes atts)
atts:
- the attribute list.Method Detail |
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public void setAttributes(org.xml.sax.Attributes atts)
setAttributes
in class Identifiable
public void writeMAGEML(java.io.Writer out) throws java.io.IOException
writeMAGEML
in class Identifiable
java.io.IOException
public boolean emptyMAGEobject()
public void writeAttributes(java.io.Writer out) throws java.io.IOException
writeAttributes
in class Identifiable
java.io.IOException
public void writeAssociations(java.io.Writer out) throws java.io.IOException
writeAssociations
in class Identifiable
java.io.IOException
public void setRow(java.lang.Integer row)
value
- to setpublic java.lang.Integer getRow()
public void setColumn(java.lang.Integer column)
value
- to setpublic java.lang.Integer getColumn()
public void setUpperLeftX(java.lang.Float upperLeftX)
value
- to setpublic java.lang.Float getUpperLeftX()
public void setUpperLeftY(java.lang.Float upperLeftY)
value
- to setpublic java.lang.Float getUpperLeftY()
public void setLowerRightX(java.lang.Float lowerRightX)
value
- to setpublic java.lang.Float getLowerRightX()
public void setLowerRightY(java.lang.Float lowerRightY)
value
- to setpublic java.lang.Float getLowerRightY()
public java.lang.String getModelClassName()
getModelClassName
in class Identifiable
public void setDistanceUnit(DistanceUnit distanceUnit)
setDistanceUnit
in interface HasDistanceUnit
value
- to setpublic DistanceUnit getDistanceUnit()
getDistanceUnit
in interface HasDistanceUnit
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