Class Summary |
BioAssayData |
Represents the dataset created when the BioAssays are created. |
BioAssayData_package |
The classes defined here provide data and the information and
annotation on the derivation of that data. |
BioAssayDimension |
An ordered list of bioAssays. |
BioAssayMap |
The BioAssayMap is the description of how source MeasuredBioAssays
and/or DerivedBioAssays are manipulated (mathematically) to produce
DerivedBioAssays. |
BioAssayMapping |
Container of the mappings of the input BioAssay dimensions to the
output BioAssay dimension. |
BioAssayTuple |
Transformed container to specify a BioAssay and the Design Elements
and their data for that BioAssay. |
BioDataCube |
A three-dimensional cube representation of the data. |
BioDataTuples |
A relational, tuple representation of the data. |
BioDataValues |
The actual values for the BioAssayCube. |
CompositeSequenceDimension |
Specialized DesignElementDimension to hold CompositeSequences. |
DataExternal |
Transformed class to associate external data to the BioAssayDataCube |
DataInternal |
Transformed class to associate whitespaced delimited data to the
BioAssayDataCube |
Datum |
Transformed container to hold a value. |
DerivedBioAssayData |
The output of a transformation event. |
DesignElementDimension |
An ordered list of designElements. |
DesignElementMap |
A DesignElementMap is the description of how source DesignElements
are transformed into a target DesignElement. |
DesignElementMapping |
Container of the mappings of the input DesignElement dimensions to
the output DesignElement dimension. |
DesignElementTuple |
Transformed container to specify a DesignElement and
QuantitationTypes for that Element. |
FeatureDimension |
Specialized DesignElementDimension to hold Features. |
MeasuredBioAssayData |
The data associated with the MeasuredBioAssay produced by
FeatureExtraction. |
QuantitationTypeDimension |
An ordered list of quantitationTypes. |
QuantitationTypeMap |
A QuantitationTypeMap is the description of how source
QuantitationTypes are mathematically transformed into a target
QuantitationType. |
QuantitationTypeMapping |
Container of the mappings of the input QuantitationType dimensions to
the output QuantitationType dimension. |
QuantitationTypeTuple |
Transformed container to specify a Quantitation Type and the value
for that Type. |
ReporterDimension |
Specialized DesignElementDimension to hold Reporters. |
Transformation |
The process by which derivedBioAssays are created from
measuredBioAssays and/or derivedBioAssays. |