gov.nih.nci.caarray.services.fileparse2.arraydesign.zonematchers
Class GenePixGALZoneMatcher
java.lang.Object
gov.nih.nci.caarray.services.fileparse2.arraydesign.zonematchers.DefaultZoneMatcher
gov.nih.nci.caarray.services.fileparse2.arraydesign.zonematchers.GenePixGALZoneMatcher
- All Implemented Interfaces:
- ZoneMatcher
public class GenePixGALZoneMatcher
- extends DefaultZoneMatcher
This ZoneMatcher is to look up Zone for a GAL file. A Block in
the GAL file is converted to Zone and Zone.name contains the Block's name
such as Block1, Block2, etc. Then for each parsed feature, its zoneIdentifier
property would be mapped to the Block column whose value would be 1, 2, 3,
or etc. The matchZone method would prepend the word "Block" to the parsed
feature's zoneIdentifier value and looks it up in the mappings returned
by the superclass setupZoneMappings() which uses the default Zone.name as
the zoneIdentifier.
- Author:
- TranP
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
GenePixGALZoneMatcher
public GenePixGALZoneMatcher()
matchZone
public Zone matchZone(java.util.Map zoneMappings,
ParsedFeature parsedFeature)
- Specified by:
matchZone
in interface ZoneMatcher
- Overrides:
matchZone
in class DefaultZoneMatcher