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java.lang.Objectorg.biomage.Common.Extendable
org.biomage.BioAssayData.BioDataValues
org.biomage.BioAssayData.BioDataCube
public class BioDataCube
A three-dimensional cube representation of the data.
Nested Class Summary | |
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class |
BioDataCube.Order
Inner class for the enumeration values that the attribute order can assume. |
Nested classes/interfaces inherited from interface org.biomage.Interface.HasPropertySets |
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HasPropertySets.PropertySets_list |
Field Summary |
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Fields inherited from class org.biomage.BioAssayData.BioDataValues |
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ojbConcreteClass |
Fields inherited from class org.biomage.Common.Extendable |
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editable, id, securedElementId |
Constructor Summary | |
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BioDataCube()
Default constructor. |
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BioDataCube(org.xml.sax.Attributes atts)
Attribute constructor. |
Method Summary | |
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boolean |
emptyMAGEobject()
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DataExternal |
getDataExternal()
Get method for dataExternal |
DataInternal |
getDataInternal()
Get method for dataInternal |
java.lang.String |
getModelClassName()
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java.lang.String |
getNameByValueOrder(int val)
For Order get the Name of the Enumeration type by passing a Value to it. |
java.lang.String |
getNameOrder()
Return the current name of the Enumeration type of Order. |
BioDataCube.Order |
getOrder()
Get method for order |
SourceType |
getSourceType()
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int |
getValueByNameOrder(java.lang.String name)
For Order get the Value of the Enumeration type by passing a Name to it. |
int |
getValueOrder()
Return the currrent value of the Enumeration type of Order. |
void |
setDataExternal(DataExternal dataExternal)
Set method for dataExternal |
void |
setDataInternal(DataInternal dataInternal)
Set method for dataInternal |
java.lang.String |
setNameByValueOrder(int val)
For Order set the Name of the Enumeration type by passing a value (int) |
void |
setOrder(BioDataCube.Order order)
Set method for order |
void |
setSourceType(SourceType sourceType)
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int |
setValueByNameOrder(java.lang.String name)
For Order set the Value of the Enumeration type by passing a Name to it. |
void |
writeAssociations(java.io.Writer out)
writeAssociations This method is responsible for assembling the association data into XML. |
void |
writeAttributes(java.io.Writer out)
writeAttributes This method is responsible for assembling the attribute data into XML. |
void |
writeMAGEML(java.io.Writer out)
writeMAGEML This method is responsible for assembling the attribute and association data into XML. |
Methods inherited from class org.biomage.Common.Extendable |
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addToPropertySets, addToPropertySets, equals, getFromPropertySets, getId, getIsEditable, getPropertySets, getSecuredElementId, isEditable, removeElementAtFromPropertySets, removeFromPropertySets, setAttributes, setId, setIsEditable, setPropertySets, setSecuredElementId, toString |
Methods inherited from class java.lang.Object |
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clone, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
Constructor Detail |
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public BioDataCube()
public BioDataCube(org.xml.sax.Attributes atts)
atts:
- the attribute list.Method Detail |
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public void writeMAGEML(java.io.Writer out) throws java.io.IOException
writeMAGEML
in class BioDataValues
java.io.IOException
public boolean emptyMAGEobject()
public void writeAttributes(java.io.Writer out) throws java.io.IOException
writeAttributes
in class BioDataValues
java.io.IOException
public void writeAssociations(java.io.Writer out) throws java.io.IOException
writeAssociations
in class BioDataValues
java.io.IOException
public void setOrder(BioDataCube.Order order)
value
- to setpublic BioDataCube.Order getOrder()
public java.lang.String setNameByValueOrder(int val)
int
- value The value to be mapped to the namepublic int setValueByNameOrder(java.lang.String name)
String
- name The name to be mapped to a valuepublic java.lang.String getNameByValueOrder(int val)
int
- val The value for which the Mapped String will be returned.public int getValueByNameOrder(java.lang.String name)
String
- name The name to be mapped to a value.public java.lang.String getNameOrder()
public int getValueOrder()
public java.lang.String getModelClassName()
getModelClassName
in class BioDataValues
public void setDataInternal(DataInternal dataInternal)
value
- to setpublic DataInternal getDataInternal()
public void setDataExternal(DataExternal dataExternal)
value
- to setpublic DataExternal getDataExternal()
public SourceType getSourceType()
public void setSourceType(SourceType sourceType)
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