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Classes in org.biomage.Interface used by org.biomage.ArrayDesign | |
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HasAuditTrail
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HasCompositeGroups
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HasCompositeGroups.CompositeGroups_list
Inner list class for holding multiple entries for attribute compositeGroups. |
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HasCompositeSequences
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HasCompositeSequences.CompositeSequences_list
Inner list class for holding multiple entries for attribute compositeSequences. |
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HasDescriptions
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HasDesignProviders
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HasDesignProviders.DesignProviders_list
Inner list class for holding multiple entries for attribute designProviders. |
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HasDistanceUnit
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HasFeatureGroups
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HasFeatureGroups.FeatureGroups_list
Inner list class for holding multiple entries for attribute featureGroups. |
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HasFeatures
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HasFeatures.Features_list
Inner list class for holding multiple entries for attribute features. |
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HasFeatureShape
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HasPropertySets
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HasProtocolApplications
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HasProtocolApplications.ProtocolApplications_list
Inner list class for holding multiple entries for attribute protocolApplications. |
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HasReporterGroups
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HasReporterGroups.ReporterGroups_list
Inner list class for holding multiple entries for attribute reporterGroups. |
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HasReporters
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HasReporters.Reporters_list
Inner list class for holding multiple entries for attribute reporters. |
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HasSecurity
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HasSpecies
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HasSurfaceType
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HasTechnologyType
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HasTypes
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HasTypes.Types_list
Inner list class for holding multiple entries for attribute types. |
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HasZoneGroups
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HasZoneGroups.ZoneGroups_list
Inner list class for holding multiple entries for attribute zoneGroups. |
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HasZoneLayout
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HasZoneLocations
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HasZoneLocations.ZoneLocations_list
Inner list class for holding multiple entries for attribute zoneLocations. |
Classes in org.biomage.Interface used by org.biomage.AuditAndSecurity | |
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HasAffiliation
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HasAuditTrail
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HasDescriptions
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HasMembers
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HasMembers.Members_list
Inner list class for holding multiple entries for attribute members. |
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HasOwner
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HasOwner.Owner_list
Inner list class for holding multiple entries for attribute owner. |
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HasParent
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HasPerformer
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HasPropertySets
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HasRoles
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HasRoles.Roles_list
Inner list class for holding multiple entries for attribute roles. |
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HasSecurity
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HasSecurityGroups
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HasSecurityGroups.SecurityGroups_list
Inner list class for holding multiple entries for attribute securityGroups. |
Classes in org.biomage.Interface used by org.biomage.BQS | |
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HasAccessions
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HasAccessions.Accessions_list
Inner list class for holding multiple entries for attribute accessions. |
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HasAuditTrail
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HasDescriptions
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HasParameters
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HasParameters.Parameters_list
Inner list class for holding multiple entries for attribute parameters. |
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HasPropertySets
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HasSecurity
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Classes in org.biomage.Interface used by org.biomage.BioEvent | |
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HasAuditTrail
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HasDescriptions
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HasPropertySets
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HasProtocolApplications
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HasProtocolApplications.ProtocolApplications_list
Inner list class for holding multiple entries for attribute protocolApplications. |
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HasSecurity
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Classes in org.biomage.Interface used by org.biomage.BioSequence | |
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HasAuditTrail
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HasCoordinate
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HasDescriptions
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HasOntologyEntries
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HasOntologyEntries.OntologyEntries_list
Inner list class for holding multiple entries for attribute ontologyEntries. |
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HasPolymerType
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HasPropertySets
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HasRegions
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HasRegions.Regions_list
Inner list class for holding multiple entries for attribute regions. |
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HasSecurity
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HasSeqFeatures
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HasSeqFeatures.SeqFeatures_list
Inner list class for holding multiple entries for attribute seqFeatures. |
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HasSequenceDatabases
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HasSequenceDatabases.SequenceDatabases_list
Inner list class for holding multiple entries for attribute sequenceDatabases. |
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HasSpecies
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HasSubregions
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HasSubregions.Subregions_list
Inner list class for holding multiple entries for attribute subregions. |
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HasType
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Classes in org.biomage.Interface used by org.biomage.Common | |
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HasAuditTrail
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HasAuditTrail.AuditTrail_list
Inner list class for holding multiple entries for attribute auditTrail. |
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HasDescriptions
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HasDescriptions.Descriptions_list
Inner list class for holding multiple entries for attribute descriptions. |
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HasPropertySets
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HasPropertySets.PropertySets_list
Inner list class for holding multiple entries for attribute propertySets. |
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HasSecurity
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Classes in org.biomage.Interface used by org.biomage.Description | |
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HasAnnotations
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HasAnnotations.Annotations_list
Inner list class for holding multiple entries for attribute annotations. |
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HasAssociations
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HasAssociations.Associations_list
Inner list class for holding multiple entries for attribute associations. |
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HasAuditTrail
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HasBibliographicReferences
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HasBibliographicReferences.BibliographicReferences_list
Inner list class for holding multiple entries for attribute bibliographicReferences. |
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HasContacts
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HasContacts.Contacts_list
Inner list class for holding multiple entries for attribute contacts. |
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HasDatabase
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HasDatabaseReferences
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HasDatabaseReferences.DatabaseReferences_list
Inner list class for holding multiple entries for attribute databaseReferences. |
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HasDescriptions
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HasExternalReference
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HasOntologyReference
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HasPropertySets
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HasSecurity
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HasType
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Classes in org.biomage.Interface used by org.biomage.Description.Ontology | |
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HasAssociations
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HasAssociations.Associations_list
Inner list class for holding multiple entries for attribute associations. |
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HasOntologyReference
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HasPropertySets
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Classes in org.biomage.Interface used by org.biomage.Experiment | |
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HasAnalysisResults
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HasAnalysisResults.AnalysisResults_list
Inner list class for holding multiple entries for attribute analysisResults. |
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HasAnnotations
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HasAnnotations.Annotations_list
Inner list class for holding multiple entries for attribute annotations. |
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HasAuditTrail
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HasBioAssayData
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HasBioAssayData.BioAssayData_list
Inner list class for holding multiple entries for attribute bioAssayData. |
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HasBioAssays
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HasBioAssays.BioAssays_list
Inner list class for holding multiple entries for attribute bioAssays. |
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HasCategory
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HasDescriptions
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HasExperimentalFactor
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HasExperimentalFactors
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HasExperimentalFactors.ExperimentalFactors_list
Inner list class for holding multiple entries for attribute experimentalFactors. |
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HasExperimentDesigns
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HasExperimentDesigns.ExperimentDesigns_list
Inner list class for holding multiple entries for attribute experimentDesigns. |
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HasFactorValues
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HasFactorValues.FactorValues_list
Inner list class for holding multiple entries for attribute factorValues. |
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HasMeasurement
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HasNormalizationDescription
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HasPropertySets
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HasProviders
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HasProviders.Providers_list
Inner list class for holding multiple entries for attribute providers. |
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HasQualityControlDescription
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HasReplicateDescription
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HasSecurity
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HasTopLevelBioAssays
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HasTopLevelBioAssays.TopLevelBioAssays_list
Inner list class for holding multiple entries for attribute topLevelBioAssays. |
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HasTypes
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HasTypes.Types_list
Inner list class for holding multiple entries for attribute types. |
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HasValue
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Classes in org.biomage.Interface used by org.biomage.HigherLevelAnalysis | |
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HasAuditTrail
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HasBioAssayDimension
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HasClusterBioAssayData
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HasDataType
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HasDescriptions
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HasDesignElementDimension
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HasNodeContents
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HasNodeContents.NodeContents_list
Inner list class for holding multiple entries for attribute nodeContents. |
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HasNodes
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HasNodes.Nodes_list
Inner list class for holding multiple entries for attribute nodes. |
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HasNodeValue
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HasNodeValue.NodeValue_list
Inner list class for holding multiple entries for attribute nodeValue. |
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HasPropertySets
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HasQuantitationDimension
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HasScale
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HasSecurity
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HasType
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Classes in org.biomage.Interface used by org.biomage.Interface | |
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HasAccessions.Accessions_list
Inner list class for holding multiple entries for attribute accessions. |
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HasAdjustments.Adjustments_list
Inner list class for holding multiple entries for attribute adjustments. |
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HasAnalysisResults.AnalysisResults_list
Inner list class for holding multiple entries for attribute analysisResults. |
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HasAnnotations.Annotations_list
Inner list class for holding multiple entries for attribute annotations. |
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HasArrayManufactureDeviations.ArrayManufactureDeviations_list
Inner list class for holding multiple entries for attribute arrayManufactureDeviations. |
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HasArrayManufacturers.ArrayManufacturers_list
Inner list class for holding multiple entries for attribute arrayManufacturers. |
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HasArrays.Arrays_list
Inner list class for holding multiple entries for attribute arrays. |
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HasAssociations.Associations_list
Inner list class for holding multiple entries for attribute associations. |
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HasAuditTrail.AuditTrail_list
Inner list class for holding multiple entries for attribute auditTrail. |
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HasBibliographicReferences.BibliographicReferences_list
Inner list class for holding multiple entries for attribute bibliographicReferences. |
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HasBioAssayData.BioAssayData_list
Inner list class for holding multiple entries for attribute bioAssayData. |
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HasBioAssayDataSources.BioAssayDataSources_list
Inner list class for holding multiple entries for attribute bioAssayDataSources. |
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HasBioAssayFactorValues.BioAssayFactorValues_list
Inner list class for holding multiple entries for attribute bioAssayFactorValues. |
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HasBioAssayMaps.BioAssayMaps_list
Inner list class for holding multiple entries for attribute bioAssayMaps. |
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HasBioAssays.BioAssays_list
Inner list class for holding multiple entries for attribute bioAssays. |
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HasBioAssayTreatments.BioAssayTreatments_list
Inner list class for holding multiple entries for attribute bioAssayTreatments. |
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HasBioAssayTupleData.BioAssayTuples_list
Inner list class for holding multiple entries for attribute bioAssayTuples. |
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HasBiologicalCharacteristics.BiologicalCharacteristics_list
Inner list class for holding multiple entries for attribute biologicalCharacteristics. |
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HasChannels.Channels_list
Inner list class for holding multiple entries for attribute channels. |
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HasCharacteristics.Characteristics_list
Inner list class for holding multiple entries for attribute characteristics. |
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HasComponentCompounds.ComponentCompounds_list
Inner list class for holding multiple entries for attribute componentCompounds. |
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HasCompositeCompositeMaps.CompositeCompositeMaps_list
Inner list class for holding multiple entries for attribute compositeCompositeMaps. |
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HasCompositeGroups.CompositeGroups_list
Inner list class for holding multiple entries for attribute compositeGroups. |
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HasCompositePositionSources.CompositePositionSources_list
Inner list class for holding multiple entries for attribute compositePositionSources. |
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HasCompositeSequences.CompositeSequences_list
Inner list class for holding multiple entries for attribute compositeSequences. |
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HasCompoundIndices.CompoundIndices_list
Inner list class for holding multiple entries for attribute compoundIndices. |
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HasCompoundMeasurements.CompoundMeasurements_list
Inner list class for holding multiple entries for attribute compoundMeasurements. |
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HasConfidenceIndicators.ConfidenceIndicators_list
Inner list class for holding multiple entries for attribute confidenceIndicators. |
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HasContacts.Contacts_list
Inner list class for holding multiple entries for attribute contacts. |
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HasContainedFeatures.ContainedFeatures_list
Inner list class for holding multiple entries for attribute containedFeatures. |
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HasControlFeatures.ControlFeatures_list
Inner list class for holding multiple entries for attribute controlFeatures. |
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HasControlledFeatures.ControlledFeatures_list
Inner list class for holding multiple entries for attribute controlledFeatures. |
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HasDatabaseReferences.DatabaseReferences_list
Inner list class for holding multiple entries for attribute databaseReferences. |
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HasDerivedBioAssayData.DerivedBioAssayData_list
Inner list class for holding multiple entries for attribute derivedBioAssayData. |
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HasDerivedBioAssayMap.DerivedBioAssayMap_list
Inner list class for holding multiple entries for attribute derivedBioAssayMap. |
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HasDescriptions.Descriptions_list
Inner list class for holding multiple entries for attribute descriptions. |
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HasDesignElementMaps.DesignElementMaps_list
Inner list class for holding multiple entries for attribute designElementMaps. |
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HasDesignElementTuples.DesignElementTuples_list
Inner list class for holding multiple entries for attribute designElementTuples. |
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HasDesignProviders.DesignProviders_list
Inner list class for holding multiple entries for attribute designProviders. |
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HasExperimentalFactors.ExperimentalFactors_list
Inner list class for holding multiple entries for attribute experimentalFactors. |
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HasExperimentDesigns.ExperimentDesigns_list
Inner list class for holding multiple entries for attribute experimentDesigns. |
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HasFactorValues.FactorValues_list
Inner list class for holding multiple entries for attribute factorValues. |
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HasFailTypes.FailTypes_list
Inner list class for holding multiple entries for attribute failTypes. |
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HasFeatureDefects.FeatureDefects_list
Inner list class for holding multiple entries for attribute featureDefects. |
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HasFeatureGroups.FeatureGroups_list
Inner list class for holding multiple entries for attribute featureGroups. |
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HasFeatureInformationSources.FeatureInformationSources_list
Inner list class for holding multiple entries for attribute featureInformationSources. |
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HasFeatureLIMSs.FeatureLIMSs_list
Inner list class for holding multiple entries for attribute featureLIMSs. |
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HasFeatureReporterMaps.FeatureReporterMaps_list
Inner list class for holding multiple entries for attribute featureReporterMaps. |
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HasFeatures.Features_list
Inner list class for holding multiple entries for attribute features. |
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HasFiducials.Fiducials_list
Inner list class for holding multiple entries for attribute fiducials. |
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HasHardwareApplications.HardwareApplications_list
Inner list class for holding multiple entries for attribute hardwareApplications. |
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HasHardwareManufacturers.HardwareManufacturers_list
Inner list class for holding multiple entries for attribute hardwareManufacturers. |
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HasHardwares.Hardwares_list
Inner list class for holding multiple entries for attribute hardwares. |
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HasImages.Images_list
Inner list class for holding multiple entries for attribute images. |
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HasImmobilizedCharacteristics.ImmobilizedCharacteristics_list
Inner list class for holding multiple entries for attribute immobilizedCharacteristics. |
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HasLabels.Labels_list
Inner list class for holding multiple entries for attribute labels. |
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HasMeasuredBioAssayData.MeasuredBioAssayData_list
Inner list class for holding multiple entries for attribute measuredBioAssayData. |
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HasMembers.Members_list
Inner list class for holding multiple entries for attribute members. |
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HasMismatchInformation.MismatchInformation_list
Inner list class for holding multiple entries for attribute mismatchInformation. |
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HasNodeContents.NodeContents_list
Inner list class for holding multiple entries for attribute nodeContents. |
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HasNodes.Nodes_list
Inner list class for holding multiple entries for attribute nodes. |
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HasNodeValue.NodeValue_list
Inner list class for holding multiple entries for attribute nodeValue. |
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HasOntologyEntries.OntologyEntries_list
Inner list class for holding multiple entries for attribute ontologyEntries. |
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HasOwner.Owner_list
Inner list class for holding multiple entries for attribute owner. |
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HasParameters.Parameters_list
Inner list class for holding multiple entries for attribute parameters. |
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HasParameterTypes.ParameterTypes_list
Inner list class for holding multiple entries for attribute parameterTypes. |
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HasParameterValues.ParameterValues_list
Inner list class for holding multiple entries for attribute parameterValues. |
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HasPerformers.Performers_list
Inner list class for holding multiple entries for attribute performers. |
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HasPhysicalBioAssayData.PhysicalBioAssayData_list
Inner list class for holding multiple entries for attribute physicalBioAssayData. |
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HasPropertySets.PropertySets_list
Inner list class for holding multiple entries for attribute propertySets. |
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HasProtocolApplications.ProtocolApplications_list
Inner list class for holding multiple entries for attribute protocolApplications. |
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HasProviders.Providers_list
Inner list class for holding multiple entries for attribute providers. |
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HasQualityControlStatistics.QualityControlStatistics_list
Inner list class for holding multiple entries for attribute qualityControlStatistics. |
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HasQuantitationTypeMaps.QuantitationTypeMaps_list
Inner list class for holding multiple entries for attribute quantitationTypeMaps. |
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HasQuantitationTypes.QuantitationTypes_list
Inner list class for holding multiple entries for attribute quantitationTypes. |
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HasQuantitationTypeTuples.QuantitationTypeTuples_list
Inner list class for holding multiple entries for attribute quantitationTypeTuples. |
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HasRegions.Regions_list
Inner list class for holding multiple entries for attribute regions. |
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HasReporterCompositeMaps.ReporterCompositeMaps_list
Inner list class for holding multiple entries for attribute reporterCompositeMaps. |
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HasReporterGroups.ReporterGroups_list
Inner list class for holding multiple entries for attribute reporterGroups. |
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HasReporterPositionSources.ReporterPositionSources_list
Inner list class for holding multiple entries for attribute reporterPositionSources. |
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HasReporters.Reporters_list
Inner list class for holding multiple entries for attribute reporters. |
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HasRoles.Roles_list
Inner list class for holding multiple entries for attribute roles. |
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HasSecurityGroups.SecurityGroups_list
Inner list class for holding multiple entries for attribute securityGroups. |
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HasSeqFeatures.SeqFeatures_list
Inner list class for holding multiple entries for attribute seqFeatures. |
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HasSequenceDatabases.SequenceDatabases_list
Inner list class for holding multiple entries for attribute sequenceDatabases. |
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HasSoftwareApplications.SoftwareApplications_list
Inner list class for holding multiple entries for attribute softwareApplications. |
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HasSoftwareManufacturers.SoftwareManufacturers_list
Inner list class for holding multiple entries for attribute softwareManufacturers. |
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HasSoftwares.Softwares_list
Inner list class for holding multiple entries for attribute softwares. |
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HasSourceBioAssays.SourceBioAssays_list
Inner list class for holding multiple entries for attribute sourceBioAssays. |
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HasSourceBioMaterialMeasurements.SourceBioMaterialMeasurements_list
Inner list class for holding multiple entries for attribute sourceBioMaterialMeasurements. |
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HasSourceContact.SourceContact_list
Inner list class for holding multiple entries for attribute sourceContact. |
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HasSourcesQuantitationType.SourcesQuantitationType_list
Inner list class for holding multiple entries for attribute sourcesQuantitationType. |
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HasSubregions.Subregions_list
Inner list class for holding multiple entries for attribute subregions. |
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HasSummaryStatistics.SummaryStatistics_list
Inner list class for holding multiple entries for attribute summaryStatistics. |
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HasTopBioMaterial.TopLevelBioMaterials_list
Inner list class for holding multiple entries for attribute topLevelBioMaterials. |
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HasTopLevelBioAssays.TopLevelBioAssays_list
Inner list class for holding multiple entries for attribute topLevelBioAssays. |
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HasTreatments.Treatments_list
Inner list class for holding multiple entries for attribute treatments. |
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HasTypes.Types_list
Inner list class for holding multiple entries for attribute types. |
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HasZoneGroups.ZoneGroups_list
Inner list class for holding multiple entries for attribute zoneGroups. |
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HasZoneLocations.ZoneLocations_list
Inner list class for holding multiple entries for attribute zoneLocations. |
Classes in org.biomage.Interface used by org.biomage.Measurement | |
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HasPropertySets
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HasUnit
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Classes in org.biomage.Interface used by org.biomage.Protocol | |
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HasAuditTrail
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HasDataType
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HasDefaultValue
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HasDescriptions
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HasHardware
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HasHardwareApplications
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HasHardwareApplications.HardwareApplications_list
Inner list class for holding multiple entries for attribute hardwareApplications. |
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HasHardwareManufacturers
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HasHardwareManufacturers.HardwareManufacturers_list
Inner list class for holding multiple entries for attribute hardwareManufacturers. |
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HasHardwares
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HasHardwares.Hardwares_list
Inner list class for holding multiple entries for attribute hardwares. |
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HasParameterType
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HasParameterTypes
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HasParameterTypes.ParameterTypes_list
Inner list class for holding multiple entries for attribute parameterTypes. |
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HasParameterValues
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HasParameterValues.ParameterValues_list
Inner list class for holding multiple entries for attribute parameterValues. |
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HasPerformers
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HasPerformers.Performers_list
Inner list class for holding multiple entries for attribute performers. |
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HasPropertySets
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HasProtocol
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HasSecurity
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HasSoftware
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HasSoftwareApplications
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HasSoftwareApplications.SoftwareApplications_list
Inner list class for holding multiple entries for attribute softwareApplications. |
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HasSoftwareManufacturers
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HasSoftwareManufacturers.SoftwareManufacturers_list
Inner list class for holding multiple entries for attribute softwareManufacturers. |
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HasSoftwares
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HasSoftwares.Softwares_list
Inner list class for holding multiple entries for attribute softwares. |
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HasType
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Classes in org.biomage.Interface used by org.biomage.QuantitationType | |
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HasAuditTrail
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HasChannel
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HasConfidenceIndicators
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HasConfidenceIndicators.ConfidenceIndicators_list
Inner list class for holding multiple entries for attribute confidenceIndicators. |
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HasDataType
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HasDescriptions
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HasPropertySets
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HasQuantitationTypeMaps
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HasQuantitationTypeMaps.QuantitationTypeMaps_list
Inner list class for holding multiple entries for attribute quantitationTypeMaps. |
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HasScale
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HasSecurity
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HasTargetQuantitationType
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Classes in org.biomage.Interface used by org.biomage.tools.helpers | |
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HasAssociations
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HasDatabase
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HasOntologyReference
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HasPropertySets
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HasType
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