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java.lang.Objectorg.biomage.Common.Extendable
org.biomage.BioAssayData.DesignElementMapping
public class DesignElementMapping
Container of the mappings of the input DesignElement dimensions to the output DesignElement dimension.
Nested Class Summary |
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Nested classes/interfaces inherited from interface org.biomage.Interface.HasDesignElementMaps |
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HasDesignElementMaps.DesignElementMaps_list |
Nested classes/interfaces inherited from interface org.biomage.Interface.HasPropertySets |
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HasPropertySets.PropertySets_list |
Field Summary | |
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protected java.util.List |
designElementMaps
The maps for the DesignElements. |
Fields inherited from class org.biomage.Common.Extendable |
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editable, id, securedElementId |
Constructor Summary | |
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DesignElementMapping()
Default constructor. |
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DesignElementMapping(org.xml.sax.Attributes atts)
Attribute constructor. |
Method Summary | |
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void |
addToDesignElementMaps(DesignElementMap designElementMap)
Method to add DesignElementMap to DesignElementMaps_list |
void |
addToDesignElementMaps(int position,
DesignElementMap designElementMap)
Method to add DesignElementMap at position to DesignElementMaps_list |
boolean |
emptyMAGEobject()
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HasDesignElementMaps.DesignElementMaps_list |
getDesignElementMaps()
Get method for designElementMaps |
DesignElementMap |
getFromDesignElementMaps(int position)
Method to get DesignElementMap from DesignElementMaps_list |
java.lang.String |
getModelClassName()
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void |
removeElementAtFromDesignElementMaps(int position)
Method to remove by position from DesignElementMaps_list |
void |
removeFromDesignElementMaps(DesignElementMap designElementMap)
Method to remove first DesignElementMap from DesignElementMaps_list |
void |
setDesignElementMaps(HasDesignElementMaps.DesignElementMaps_list designElementMaps)
Set method for designElementMaps |
void |
writeAssociations(java.io.Writer out)
writeAssociations This method is responsible for assembling the association data into XML. |
void |
writeAttributes(java.io.Writer out)
writeAttributes This method is responsible for assembling the attribute data into XML. |
void |
writeMAGEML(java.io.Writer out)
writeMAGEML This method is responsible for assembling the attribute and association data into XML. |
Methods inherited from class org.biomage.Common.Extendable |
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addToPropertySets, addToPropertySets, equals, getFromPropertySets, getId, getIsEditable, getPropertySets, getSecuredElementId, isEditable, removeElementAtFromPropertySets, removeFromPropertySets, setAttributes, setId, setIsEditable, setPropertySets, setSecuredElementId, toString |
Methods inherited from class java.lang.Object |
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clone, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
Field Detail |
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protected java.util.List designElementMaps
Constructor Detail |
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public DesignElementMapping()
public DesignElementMapping(org.xml.sax.Attributes atts)
atts:
- the attribute list.Method Detail |
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public void writeMAGEML(java.io.Writer out) throws java.io.IOException
writeMAGEML
in class Extendable
java.io.IOException
public boolean emptyMAGEobject()
public void writeAttributes(java.io.Writer out) throws java.io.IOException
writeAttributes
in class Extendable
java.io.IOException
public void writeAssociations(java.io.Writer out) throws java.io.IOException
writeAssociations
in class Extendable
java.io.IOException
public java.lang.String getModelClassName()
getModelClassName
in class Extendable
public void setDesignElementMaps(HasDesignElementMaps.DesignElementMaps_list designElementMaps)
setDesignElementMaps
in interface HasDesignElementMaps
value
- to setpublic HasDesignElementMaps.DesignElementMaps_list getDesignElementMaps()
getDesignElementMaps
in interface HasDesignElementMaps
public void addToDesignElementMaps(DesignElementMap designElementMap)
addToDesignElementMaps
in interface HasDesignElementMaps
public void addToDesignElementMaps(int position, DesignElementMap designElementMap)
addToDesignElementMaps
in interface HasDesignElementMaps
public DesignElementMap getFromDesignElementMaps(int position)
getFromDesignElementMaps
in interface HasDesignElementMaps
public void removeElementAtFromDesignElementMaps(int position)
removeElementAtFromDesignElementMaps
in interface HasDesignElementMaps
public void removeFromDesignElementMaps(DesignElementMap designElementMap)
removeFromDesignElementMaps
in interface HasDesignElementMaps
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