Uses of Class
gov.nih.nci.caarray.common.data.security.ProtectionGroupData

Packages that use ProtectionGroupData
gov.nih.nci.caarray.common.data.array   
gov.nih.nci.caarray.common.data.arraydesign   
gov.nih.nci.caarray.common.data.biomaterial   
gov.nih.nci.caarray.common.data.designelement   
gov.nih.nci.caarray.common.data.experiment   
gov.nih.nci.caarray.common.data.protocol   
gov.nih.nci.caarray.common.data.security   
gov.nih.nci.caarray.common.delegate   
gov.nih.nci.caarray.services.fileupload   
gov.nih.nci.caarray.services.mageloader   
gov.nih.nci.caarray.services.mageml   
gov.nih.nci.caarray.services.mageml.ejb   
gov.nih.nci.caarray.services.security   
gov.nih.nci.caarray.services.security.ejb   
gov.nih.nci.caarray.services.util   
gov.nih.nci.caarray.ui.arraydesign   
gov.nih.nci.caarray.ui.core   
 

Uses of ProtectionGroupData in gov.nih.nci.caarray.common.data.array
 

Methods in gov.nih.nci.caarray.common.data.array that return ProtectionGroupData
 ProtectionGroupData[] ArrayGroupDesc.getProtectionGroups()
           
 ProtectionGroupData ArraySearchCriteria.getVisibility()
           
 

Methods in gov.nih.nci.caarray.common.data.array with parameters of type ProtectionGroupData
 void ArrayGroupDesc.setProtectionGroups(ProtectionGroupData[] protectionGroups)
           
 void ArraySearchCriteria.setVisibility(ProtectionGroupData visibility)
           
 

Uses of ProtectionGroupData in gov.nih.nci.caarray.common.data.arraydesign
 

Methods in gov.nih.nci.caarray.common.data.arraydesign that return ProtectionGroupData
 ProtectionGroupData[] ReporterGroupDesc.getProtectionGroups()
           
 ProtectionGroupData[] FeatureGroupDesc.getProtectionGroups()
           
 ProtectionGroupData[] CompositeGroupDesc.getProtectionGroups()
           
 ProtectionGroupData[] ArrayDesignDesc.getProtectionGroups()
           
 ProtectionGroupData ReporterGroupSearchCriteria.getVisibility()
           
 ProtectionGroupData FeatureGroupSearchCriteria.getVisibility()
           
 ProtectionGroupData CompositeGroupSearchCriteria.getVisibility()
           
 ProtectionGroupData ArrayDesignSearchCriteria.getVisibility()
           
 

Methods in gov.nih.nci.caarray.common.data.arraydesign with parameters of type ProtectionGroupData
 void ReporterGroupDesc.setProtectionGroups(ProtectionGroupData[] datas)
           
 void FeatureGroupDesc.setProtectionGroups(ProtectionGroupData[] datas)
           
 void CompositeGroupDesc.setProtectionGroups(ProtectionGroupData[] datas)
           
 void ArrayDesignDesc.setProtectionGroups(ProtectionGroupData[] protectionGroups)
           
 void ReporterGroupSearchCriteria.setVisibility(ProtectionGroupData data)
           
 void FeatureGroupSearchCriteria.setVisibility(ProtectionGroupData data)
           
 void CompositeGroupSearchCriteria.setVisibility(ProtectionGroupData data)
           
 void ArrayDesignSearchCriteria.setVisibility(ProtectionGroupData data)
           
 

Uses of ProtectionGroupData in gov.nih.nci.caarray.common.data.biomaterial
 

Fields in gov.nih.nci.caarray.common.data.biomaterial declared as ProtectionGroupData
protected  ProtectionGroupData[] BioMaterialDesc.protectionGroups_
           
 

Methods in gov.nih.nci.caarray.common.data.biomaterial that return ProtectionGroupData
 ProtectionGroupData[] BioMaterialDesc.getProtectionGroups()
           
 ProtectionGroupData BioMaterialSearchCriteria.getVisibility()
           
 

Methods in gov.nih.nci.caarray.common.data.biomaterial with parameters of type ProtectionGroupData
 void BioMaterialDesc.setProtectionGroups(ProtectionGroupData[] protectionGroups)
           
 void BioMaterialSearchCriteria.setVisibility(ProtectionGroupData data)
           
 

Uses of ProtectionGroupData in gov.nih.nci.caarray.common.data.designelement
 

Methods in gov.nih.nci.caarray.common.data.designelement that return ProtectionGroupData
 ProtectionGroupData[] CompositeSequenceDesc.getProtectionGroups()
           
 

Methods in gov.nih.nci.caarray.common.data.designelement with parameters of type ProtectionGroupData
 void CompositeSequenceDesc.setProtectionGroups(ProtectionGroupData[] datas)
           
 

Uses of ProtectionGroupData in gov.nih.nci.caarray.common.data.experiment
 

Methods in gov.nih.nci.caarray.common.data.experiment that return ProtectionGroupData
 ProtectionGroupData[] ExperimentDesc.getProtectionGroups()
           
 ProtectionGroupData ExperimentSearchCriteria.getVisibility()
           
 

Methods in gov.nih.nci.caarray.common.data.experiment with parameters of type ProtectionGroupData
 void ExperimentDesc.setProtectionGroups(ProtectionGroupData[] datas)
           
 void ExperimentSearchCriteria.setVisibility(ProtectionGroupData visibility_)
           
 

Uses of ProtectionGroupData in gov.nih.nci.caarray.common.data.protocol
 

Methods in gov.nih.nci.caarray.common.data.protocol that return ProtectionGroupData
 ProtectionGroupData[] SoftwareDesc.getProtectionGroups()
           
 ProtectionGroupData[] ProtocolDesc.getProtectionGroups()
           
 ProtectionGroupData[] HardwareDesc.getProtectionGroups()
           
 ProtectionGroupData SoftwareSearchCriteria.getVisibility()
           
 ProtectionGroupData ProtocolSearchCriteria.getVisibility()
           
 ProtectionGroupData HardwareSearchCriteria.getVisibility()
           
 

Methods in gov.nih.nci.caarray.common.data.protocol with parameters of type ProtectionGroupData
 void SoftwareDesc.setProtectionGroups(ProtectionGroupData[] datas)
           
 void ProtocolDesc.setProtectionGroups(ProtectionGroupData[] datas)
           
 void HardwareDesc.setProtectionGroups(ProtectionGroupData[] datas)
           
 void SoftwareSearchCriteria.setVisibility(ProtectionGroupData data)
           
 void ProtocolSearchCriteria.setVisibility(ProtectionGroupData data)
           
 void HardwareSearchCriteria.setVisibility(ProtectionGroupData data)
           
 

Uses of ProtectionGroupData in gov.nih.nci.caarray.common.data.security
 

Methods in gov.nih.nci.caarray.common.data.security that return ProtectionGroupData
 ProtectionGroupData[] SecuredElementData.getProtectionGroups()
           
 ProtectionGroupData[] RoleAssignmentData.getProtectionGroups()
           
 

Methods in gov.nih.nci.caarray.common.data.security with parameters of type ProtectionGroupData
 void RoleAssignmentData.addProtectionGroup(ProtectionGroupData protectionGroup)
           
 void SecuredElementData.setProtectionGroups(ProtectionGroupData[] protectionGroups)
          Sets protection groups.
 

Constructors in gov.nih.nci.caarray.common.data.security with parameters of type ProtectionGroupData
RoleAssignmentData(RoleData role, ProtectionGroupData[] protectionGroups)
           
 

Uses of ProtectionGroupData in gov.nih.nci.caarray.common.delegate
 

Methods in gov.nih.nci.caarray.common.delegate that return ProtectionGroupData
 ProtectionGroupData[] SecurityManagerDelegate.getElementProtectionGroups(java.lang.String objectId)
          Gets Protection Groups associated with a Object
 ProtectionGroupData[] CaSecurityManagerDelegate.getElementProtectionGroups(java.lang.String objectId)
          Gets Protection Groups associated with a Object
 ProtectionGroupData[] SecurityManagerDelegate.getProtectionGroups()
          Gets all the protection Groups in the system
 ProtectionGroupData[] CaSecurityManagerDelegate.getProtectionGroups()
          Gets all the protection Groups in the system
 

Methods in gov.nih.nci.caarray.common.delegate with parameters of type ProtectionGroupData
 SecuredElementItf[] SecurityManagerDelegate.canUserAccessElement(SecuredElementItf[] objects, java.lang.String[] roleIds, ProtectionGroupData[] protectionGroups)
          Checks if the user can access the securedElement for this Object.
 SecuredElementItf[] CaSecurityManagerDelegate.canUserAccessElement(SecuredElementItf[] objects, java.lang.String[] roleIds, ProtectionGroupData[] protectionGroups)
          Checks if the user can access the securedElement for this Object.
 void SecurityManagerDelegate.setElementProtectionGroups(java.lang.String objectId, ProtectionGroupData[] protectionGroups)
          set ProtectionGroups for a securedElement/Object
 void CaSecurityManagerDelegate.setElementProtectionGroups(java.lang.String objectId, ProtectionGroupData[] protectionGroups)
          set ProtectionGroups for a securedElement/Object
 void SecurityManagerDelegate.setSecuredElementProtectionGroups(java.lang.String objectId, ProtectionGroupData[] protectionGroups)
          update the protectionGroups associated with a Secured Element
 void CaSecurityManagerDelegate.setSecuredElementProtectionGroups(java.lang.String objectId, ProtectionGroupData[] protectionGroups)
          update the protectionGroups associated with a Secured Element
 void SecurityManagerDelegate.updateSecuredElementProtectionGroups(java.lang.String objectId, ProtectionGroupData[] protectionGroups)
          update the protectionGroups associated with a Secured Element
 void CaSecurityManagerDelegate.updateSecuredElementProtectionGroups(java.lang.String objectId, ProtectionGroupData[] protectionGroups)
          update the protectionGroups associated with a Secured Element
 

Uses of ProtectionGroupData in gov.nih.nci.caarray.services.fileupload
 

Methods in gov.nih.nci.caarray.services.fileupload that return ProtectionGroupData
 ProtectionGroupData[] UploadFileValues.getProtectionGroups()
           
 ProtectionGroupData[] ArrayDesignValues.getProtectionGroups()
           
 

Methods in gov.nih.nci.caarray.services.fileupload with parameters of type ProtectionGroupData
 void UploadFileValues.setMAGEMLSecurity(java.lang.String owner, ProtectionGroupData[] protectionGroups)
           
 void ArrayDesignValues.setProtectionGroups(ProtectionGroupData[] protectionGroups)
           
 

Uses of ProtectionGroupData in gov.nih.nci.caarray.services.mageloader
 

Methods in gov.nih.nci.caarray.services.mageloader that return ProtectionGroupData
 ProtectionGroupData[] MAGEMLImportManagerDB.getProtectionGroups()
           
 

Methods in gov.nih.nci.caarray.services.mageloader with parameters of type ProtectionGroupData
 void MAGEMLImportManagerDB.setProtectionGroups(ProtectionGroupData[] protectionGroups)
           
 

Constructors in gov.nih.nci.caarray.services.mageloader with parameters of type ProtectionGroupData
DatabaseImportMAGEContentHandler(java.lang.String owner, ProtectionGroupData[] protectionGroups)
           
DatabaseImportMAGEReader(java.lang.String fileName, boolean isArrayDesignContent, java.lang.String owner, ProtectionGroupData[] protectionGroups)
           
DatabaseImportMAGEReader(java.lang.String directory, java.lang.String[] fileNames, java.lang.String owner, ProtectionGroupData[] protectionGroups)
           
 

Uses of ProtectionGroupData in gov.nih.nci.caarray.services.mageml
 

Methods in gov.nih.nci.caarray.services.mageml with parameters of type ProtectionGroupData
 void MAGEMLManagerDelegate.importArrayDesign(java.lang.String pathName, java.lang.String owner, ProtectionGroupData[] protectionGroups)
          Imports a MAGEML array design
 void MAGEMLManagerDelegate.importExperiment(java.lang.String directory, java.lang.String[] fileNames, java.lang.String owner, ProtectionGroupData[] protectionGroups)
           
 void MAGEMLManagerDelegate.importExperiment(java.lang.String pathName, java.lang.String owner, ProtectionGroupData[] protectionGroups)
           
 void MAGEMLManagerDelegate.importExperiment(java.lang.String directory, java.lang.String fileName, java.lang.String owner, ProtectionGroupData[] protectionGroups)
           
 void MAGEMLManagerDelegate.importProtocols(java.lang.String pathName, java.lang.String owner, ProtectionGroupData[] protectionGroups)
          For testing only
 

Uses of ProtectionGroupData in gov.nih.nci.caarray.services.mageml.ejb
 

Methods in gov.nih.nci.caarray.services.mageml.ejb with parameters of type ProtectionGroupData
 void MAGEMLManagerEJB.importArrayDesign(java.lang.String pathName, java.lang.String owner, ProtectionGroupData[] protectionGroups)
           
 void MAGEMLManagerEJB.importExperiment(java.lang.String directory, java.lang.String[] fileNames, java.lang.String owner, ProtectionGroupData[] protectionGroups)
           
 void MAGEMLManagerEJB.importExperiment(java.lang.String pathName, java.lang.String owner, ProtectionGroupData[] protectionGroups)
           
 void MAGEMLManagerEJB.importProtocols(java.lang.String pathName, java.lang.String owner, ProtectionGroupData[] protectionGroups)
          For testing only
 

Uses of ProtectionGroupData in gov.nih.nci.caarray.services.security
 

Methods in gov.nih.nci.caarray.services.security that return ProtectionGroupData
 ProtectionGroupData[] SecurityAdminService.getElementGroups(java.lang.String objectId)
          Returns an array of ProtectionGroups with which the protectionElement is associated
 ProtectionGroupData[] SecurityAdminService.getProtectionGroups()
          Returns an array of ProtectionGroups which are present in the application.
 

Methods in gov.nih.nci.caarray.services.security with parameters of type ProtectionGroupData
 SecuredElementItf[] SecurityServiceObj.authorizeUser(java.lang.String loginName, java.lang.String[] roles, java.lang.String applicationName, SecuredElementItf[] objects, ProtectionGroupData[] protectionGroups)
          Returns the given users with role's access permission to a collection of protection element.
 int SecurityAdminService.createProtectionElem_Refactored(java.lang.String applicationName, java.lang.String objectId, java.lang.String attrName, java.lang.String elemName, java.lang.String elemDesc, java.lang.String ownerLoginName, ProtectionGroupData[] protectionGroups)
          Create a protection element.
 int SecurityAdminService.createProtectionElem(java.lang.String applicationName, java.lang.String objectId, java.lang.String attrName, java.lang.String elemName, java.lang.String elemDesc, java.lang.String ownerLoginName, ProtectionGroupData[] protectionGroups)
          Create a protection element.
 void SecurityAdminService.removeSecuredElemProtectionGroups(java.lang.String objectId, ProtectionGroupData[] protectionGroups)
          remove Protection/Group association from AS_PROTECTION_GROUP_ELEMENT table.
 void SecurityAdminService.setSecuredElemProtectionGroups(java.lang.String objectId, ProtectionGroupData[] protectionGroups)
          Insert a protection element to AS_PROTECTION_GROUP_ELEMENT table.
 void SecurityAdminService.updateSecuredElemProtectionGroups(java.lang.String objectId, ProtectionGroupData[] protectionGroups)
          Update ProtectionGroups associated with a protection element to AS_PROTECTION_GROUP_ELEMENT table.
 

Uses of ProtectionGroupData in gov.nih.nci.caarray.services.security.ejb
 

Methods in gov.nih.nci.caarray.services.security.ejb that return ProtectionGroupData
 ProtectionGroupData[] SecurityManagerEJB.getElementProtectionGroups(java.lang.String objectId)
          Gets Protection Groups associated with a Object
 ProtectionGroupData[] CaSecurityManagerEJB.getElementProtectionGroups(java.lang.String objectId)
          Gets Protection Groups associated with a Object
 ProtectionGroupData[] SecurityManagerEJB.getProtectionGroups()
          Gets all the protection Groups in the system
 ProtectionGroupData[] CaSecurityManagerEJB.getProtectionGroups()
          Gets all the protection Groups in the system
 

Methods in gov.nih.nci.caarray.services.security.ejb with parameters of type ProtectionGroupData
 SecuredElementItf[] SecurityManagerEJB.canUserAccessElement(SecuredElementItf[] objectIds, java.lang.String[] roleIds, ProtectionGroupData[] protectionGroups)
          Checks if the user can access the securedElement for this Object.
 SecuredElementItf[] CaSecurityManagerEJB.canUserAccessElement(SecuredElementItf[] objectIds, java.lang.String[] roleIds, ProtectionGroupData[] protectionGroups)
          Checks if the user can access the securedElement for this Object.
 void SecurityManagerEJB.setElementProtectionGroups(java.lang.String objectId, ProtectionGroupData[] protectionGroups)
          set ProtectionGroups for a securedElement/Object
 void CaSecurityManagerEJB.setElementProtectionGroups(java.lang.String objectId, ProtectionGroupData[] protectionGroups)
          set ProtectionGroups for a securedElement/Object
 void SecurityManagerEJB.updateElementProtectionGroups(java.lang.String objectId, ProtectionGroupData[] protectionGroups)
          updateProtectionGroups for a securedElement/Object
 void CaSecurityManagerEJB.updateElementProtectionGroups(java.lang.String objectId, ProtectionGroupData[] protectionGroups)
          updateProtectionGroups for a securedElement/Object
 

Uses of ProtectionGroupData in gov.nih.nci.caarray.services.util
 

Methods in gov.nih.nci.caarray.services.util that return ProtectionGroupData
static ProtectionGroupData[] EJBUtils.getProtectionGroupsFromObject(SecuredElementItf itf)
           
 

Methods in gov.nih.nci.caarray.services.util with parameters of type ProtectionGroupData
static SecuredElementItf[] SecurityUtils.searchVisibility(ProtectionGroupData visibility, SecuredElementItf[] results, java.lang.String[] requiredRoles)
           
static void EJBUtils.setProtectionGroups(ProtectionGroupData[] protectionGroups, java.lang.String securedElemId)
           
static void EJBUtils.updateProtectionGroups(ProtectionGroupData[] protectionGroups, java.lang.String securedElemId)
           
 

Uses of ProtectionGroupData in gov.nih.nci.caarray.ui.arraydesign
 

Methods in gov.nih.nci.caarray.ui.arraydesign that return ProtectionGroupData
static ProtectionGroupData[] ArrayUtils.getVisibilityDropdown()
           
static ProtectionGroupData[] ArrayDesignUtils.getVisibilityDropdown()
           
 

Uses of ProtectionGroupData in gov.nih.nci.caarray.ui.core
 

Methods in gov.nih.nci.caarray.ui.core that return ProtectionGroupData
static ProtectionGroupData[] ActionUtils.createProtectionGroupData(java.lang.String[] selectedGroups)
           
static ProtectionGroupData[] ActionUtils.getVisibilityDropdown()
           
 

Methods in gov.nih.nci.caarray.ui.core with parameters of type ProtectionGroupData
static java.lang.String[] ActionUtils.getSelectedVisibilitys(ProtectionGroupData[] pgdSelected)
           
static void ActionUtils.getSelectedVisibilitys(ProtectionGroupData[] pgdSelected, java.lang.String[] selectedVisibilityNames, java.lang.String[] selectedVisibilityIds)