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Uses of HasProtocolApplications in org.biomage.Array |
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Classes in org.biomage.Array that implement HasProtocolApplications | |
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class |
ArrayManufacture
Describes the process by which arrays are produced. |
Uses of HasProtocolApplications in org.biomage.ArrayDesign |
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Classes in org.biomage.ArrayDesign that implement HasProtocolApplications | |
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ArrayDesign
Describes the design of an gene expression layout. |
class |
PhysicalArrayDesign
A design that is expected to be used to manufacture physical arrays. |
Uses of HasProtocolApplications in org.biomage.BioAssay |
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Classes in org.biomage.BioAssay that implement HasProtocolApplications | |
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BioAssayCreation
The process by which an array and one or more biomaterials are combined to create a bioAssayCreation. |
class |
BioAssayTreatment
The event which records the process by which PhysicalBioAssays are processed (typically washing, blocking, etc...). |
class |
FeatureExtraction
The process by which data is extracted from an image producing a measuredBioAssayData and a measuredBioAssay. |
class |
Hybridization
The archetypal bioAssayCreation event, whereby biomaterials are hybridized to an array. |
class |
ImageAcquisition
The process by which an image is generated (typically scanning). |
Uses of HasProtocolApplications in org.biomage.BioAssayData |
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Classes in org.biomage.BioAssayData that implement HasProtocolApplications | |
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BioAssayMap
The BioAssayMap is the description of how source MeasuredBioAssays and/or DerivedBioAssays are manipulated (mathematically) to produce DerivedBioAssays. |
class |
DesignElementMap
A DesignElementMap is the description of how source DesignElements are transformed into a target DesignElement. |
class |
QuantitationTypeMap
A QuantitationTypeMap is the description of how source QuantitationTypes are mathematically transformed into a target QuantitationType. |
class |
Transformation
The process by which derivedBioAssays are created from measuredBioAssays and/or derivedBioAssays. |
Uses of HasProtocolApplications in org.biomage.BioEvent |
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Classes in org.biomage.BioEvent that implement HasProtocolApplications | |
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BioEvent
An abstract class to capture the concept of an event (either in the laboratory or a computational analysis). |
class |
Map
A Map is the description of how sources are transformed into a target. |
Uses of HasProtocolApplications in org.biomage.BioMaterial |
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Classes in org.biomage.BioMaterial that implement HasProtocolApplications | |
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class |
Treatment
The process by which a biomaterial is created (from source biomaterials). |
Uses of HasProtocolApplications in org.biomage.DesignElement |
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Classes in org.biomage.DesignElement that implement HasProtocolApplications | |
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CompositeCompositeMap
A CompositeCompositeMap is the description of how source CompositeSequences are transformed into a target CompositeSequence. |
class |
FeatureReporterMap
A FeatureReporterMap is the description of how source features are transformed into a target reporter. |
class |
ReporterCompositeMap
A ReporterCompositeMap is the description of how source Reporters are transformed into a target CompositeSequences. |
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