Constant Field Values


Contents
gov.nih.*

gov.nih.nci.caarray.common.data.fileupload2.FileType
public static final java.lang.String CATEGORY_ARRAY_DESIGN "ARRAY_DESIGN"
public static final java.lang.String CATEGORY_DERIVED_BIOASSAY "DERIVED_BIOASSAY"
public static final java.lang.String CATEGORY_MAGEML "MAGEML"
public static final java.lang.String CATEGORY_MEASURED_BIOASSAY "MEASURED_BIOASSAY"
public static final java.lang.String CATEGORY_NON_PARSEABLE "NON_PARSEABLE"
public static final java.lang.String CATEGORY_OTHER "OTHER"

gov.nih.nci.caarray.common.data.vocab.VocabCategory
public static final java.lang.String ACTION "Action"
public static final java.lang.String ACTION_LABELING "labeling"
public static final java.lang.String ACTION_POOLING "pool"
public static final java.lang.String ACTION_SPLITTING "split"
public static final java.lang.String AGE_NR "Age"
public static final java.lang.String ALLELE_NR "Allele"
public static final java.lang.String ATMOSPHERE_NR "Atmosphere"
public static final java.lang.String ATTACHMENT "attachment"
public static final java.lang.String BARRIER_FACILITY_NR "BarrierFacility"
public static final java.lang.String BEDDING_NR "Bedding"
public static final java.lang.String BIOMETRICS_NR "Biometrics"
public static final java.lang.String BIOSAMPLE_TYPE "BioSampleType"
public static final java.lang.String BIOSOURCE_TYPE "BioSourceType"
public static final java.lang.String CELL_LINE "CellLine"
public static final java.lang.String CELL_TYPE "CellType"
public static final java.lang.String CHROMOSOMAL_ABERRATION_NR "ChromosomalAberration"
public static final java.lang.String CHROMOSOMAL_ABERRATION_TYPE "ChromosomalAberrationClassification"
public static final java.lang.String CLINICAL_HISTORY_NR "ClinicalHistory"
public static final java.lang.String CLINICAL_TEST_NR "ClinicalTest"
public static final java.lang.String CLINICAL_TREATMENT_NR "ClinicalTreatment"
public static final java.lang.String CULTIVAR "Cultivar"
public static final java.lang.String DATA_TYPE "datatype"
public static final java.lang.String DEVELOPMENTAL_STAGE "DevelopmentalStage"
public static final java.lang.String DISEASE_LOCATION "DiseaseLocation"
public static final java.lang.String DISEASE_STAGE "DiseaseStage"
public static final java.lang.String DISEASE_STATE "DiseaseState"
public static final java.lang.String DISTANCE_UNIT "DistanceUnit"
public static final java.lang.String ECOTYPE "Ecotype"
public static final java.lang.String ELEMENT_TYPE "elementtype"
public static final java.lang.String ENVIRONMENTAL_HISTORY_DESIGN_NR "EnvironmentalHistoryDesign"
public static final java.lang.String EXPERIMENT_DESIGN_TYPE "ExperimentDesignType"
public static final java.lang.String EXPERIMENTAL_FACTOR_CATEGORY "ExperimentalFactorCategory"
public static final java.lang.String FACTOR_VALUE "FactorValue"
public static final java.lang.String FAMILY_HISTORY_NR "FamilyHistory"
public static final java.lang.String GENERATION_NR "Generation"
public static final java.lang.String GENETIC_MODIFICATION "GeneticModification"
public static final java.lang.String GENOTYPE_NR "Genotype"
public static final java.lang.String GEOGRAPHIC_LOCATION_NR "GeographicLocation"
public static final java.lang.String HARDWARE_TYPE "HardwareType"
public static final java.lang.String HISTOLOGY_NR "Histology"
public static final java.lang.String HOST_NR "Host"
public static final java.lang.String HUMIDITY_NR "Humidity"
public static final java.lang.String INDIVIDUAL_NR "Individual"
public static final java.lang.String INITIAL_TIME_POINT "InitialTimePoint"
public static final java.lang.String LABEL_COMPOUND "LabelCompound"
public static final java.lang.String LIGHT_NR "Light"
public static final java.lang.String MASS_UNIT "MassUnit"
public static final java.lang.String MATERIAL_TYPE "MaterialType"
public static final java.lang.String MEDIA "Media"
public static final java.lang.String NUTRIENTS_NR "Nutrients"
public static final java.lang.String ORGANISM_PART "OrganismPart"
public static final java.lang.String ORGANISM_STATUS "OrganismStatus"
public static final java.lang.String ORIENTATION_MARK_POSITION "OrientationMarkPosition"
public static final java.lang.String PATHOGEN_TEST_NR "PathogenTest"
public static final java.lang.String PHENOTYPE_NR "Phenotype"
public static final java.lang.String PLOIDY "Ploidy"
public static final java.lang.String POLYMER_TYPE "polymertype"
public static final java.lang.String POPULATION_DENSITY_NR "PopulationDensity"
public static final java.lang.String PROTOCOL_ARRAY_MANUF "array_manufacturing_protocol"
public static final java.lang.String PROTOCOL_DATA_TRANSFORMATION "DataTransformation"
public static final java.lang.String PROTOCOL_FEATURE_EXTRACTION "feature_extraction"
public static final java.lang.String PROTOCOL_HIGH_LEVEL_ANALYSIS "HigherLevelAnalysisProtocolType"
public static final java.lang.String PROTOCOL_HYBRIDIZATION "hybridization"
public static final java.lang.String PROTOCOL_IMAGE_ACQUISITION "image_acquisition"
public static final java.lang.String PROTOCOL_TYPE "ProtocolType"
public static final java.lang.String PUBLICATION_TYPE "PublicationType"
public static final java.lang.String QUALITY_CONTROL_DESCRIPTION_TYPE "QualityControlDescriptionType"
public static final java.lang.String ROLE "Roles"
public static final java.lang.String ROLE_INVESTIGATOR "investigator"
public static final java.lang.String ROLE_SUBMITTER "submitter"
public static final java.lang.String SCALE "scale"
public static final java.lang.String SEX "Sex"
public static final java.lang.String SOFTWARE_TYPE "SoftwareType"
public static final java.lang.String SPECIES "species"
public static final java.lang.String STRAIN_OR_LINE "StrainOrLine"
public static final java.lang.String STRANDEDNESS "strandedness"
public static final java.lang.String SUBSTRATE_TYPE "substratetype"
public static final java.lang.String SURFACE_TYPE "surfacetype"
public static final java.lang.String TARGETED_CELL_TYPE "TargetedCellType"
public static final java.lang.String TECHNOLOGY_TYPE "technologytype"
public static final java.lang.String TEMPERATURE_NR "Temperature"
public static final java.lang.String TIME_UNIT "TimeUnit"
public static final java.lang.String TUMOR_GRADING "TumorGrading"
public static final java.lang.String UNIT "Unit"
public static final java.lang.String WATER_NR "Water"

gov.nih.nci.caarray.common.delegate.CaSecurityManagerDelegate
public static final int LOCAL 1
public static final int REMOTE 0

gov.nih.nci.caarray.common.delegate.SecurityManagerDelegate
public static final int LOCAL 1
public static final int REMOTE 0

gov.nih.nci.caarray.common.exception.UIMessageConstants
public static final java.lang.String EJB_CREATE_EXCEPTION "Error communicating with the server."
public static final java.lang.String EJB_REMOTE_EXCEPTION "Error communicating with the server."
public static final java.lang.String EJB_REMOVE_EXCEPTION "Error communicating with the server."

gov.nih.nci.caarray.common.util.CaArrayConstants
public static final java.lang.String HTTP_APPLET_ARRAYDESIGNADDUPDATEFORM "arraydesignAddUpdateForm"
public static final java.lang.String HTTP_APPLET_FILETYPE_GAL "GAL"
public static final java.lang.String HTTP_APPLET_FILEUPLOADDATAOBJECT "fileUploadDataObject"
public static final java.lang.String HTTP_APPLET_FILEUPLOADSESSIONDATA "httpFileUploadSessionData"
public static final java.lang.String HTTP_APPLET_MODE_STOP "stop"
public static final java.lang.String HTTP_APPLET_MODE_SUCCESS "success"
public static final java.lang.String HTTP_APPLET_MODULE_ARRAYDESIGN "arraydesign"
public static final java.lang.String HTTP_APPLET_MODULE_HYBRIDIZATION "hybridization"
public static final java.lang.String HTTP_APPLET_MODULE_MAGEML "mageml"
public static final java.lang.String HTTP_APPLET_PARAMETER "httpAppletParams"
public static final java.lang.String HTTP_APPLET_REQUEST_ID "id"
public static final java.lang.String HTTP_APPLET_REQUEST_MODE "mode"
public static final java.lang.String HTTP_APPLET_SOFTWARE_GENEPIX "GenePix"
public static final java.lang.String HTTP_APPLET_SOFTWARE_UCSFSPOT "GenePix From UCSF Spot"
public static final java.lang.String STRUTS_SUCCESS "success"

gov.nih.nci.caarray.services.exception.ServerMessageConstants
public static final java.lang.String EJB_CREATE_EXCEPTION "Error creating EJB Home interface."
public static final java.lang.String EJB_REMOTE_EXCEPTION "Error making remote method call."
public static final java.lang.String EJB_REMOVE_EXCEPTION "Error removing EJB."

gov.nih.nci.caarray.services.fileparse.FileMessageTypes
public static final java.lang.String ARRAY_DESIGN_MESSAGE "ARRAY_DESIGN_MESSAGE"
public static final java.lang.String HYBRIDIZATION_FILE_MESSAGE "HYBRIDIZATION_FILE_MESSAGE"
public static final java.lang.String MAGEML_MESSAGE "MAGEML_MESSAGE"

gov.nih.nci.caarray.services.fileparse.test.Tester
public static final int LOCAL_MODE 1
public static final int REMOTE_MODE 2

gov.nih.nci.caarray.services.fileparse2.hybridization.SimpleDesignElement
public static final java.lang.String VALUE_DELIMITER "-"

gov.nih.nci.caarray.services.fileparse2.parsers.ParserUtils
public static final java.lang.String TAB "\t"

gov.nih.nci.caarray.services.fileupload2.mdb.FileUploadHandlerMDB
public static final java.lang.String QUEUE_CONN_FACTORY "UIL2ConnectionFactory"
public static final java.lang.String QUEUE_NAME "queue/FileUploadHandlerQueue"

gov.nih.nci.caarray.services.security.RdbmsAuthorizationDAObj
public static final java.lang.String EMPTY ""

gov.nih.nci.caarray.services.security.mageom.DefaultSecuredElementIdUpdater
public static final int MAX_IN_CLAUSE_SIZE 100

gov.nih.nci.caarray.services.security.mageom.SecuredElementIdUpdaterFactory
public static final java.lang.String DEFAULT_UPDATER "gov.nih.nci.caarray.services.security.mageom.DefaultSecuredElementIdUpdater"

gov.nih.nci.caarray.services.security.mageom.SecuredElementUpdateListener
public static final java.lang.String CONNECTION_FACTORY_NAME "UIL2ConnectionFactory"
public static final java.lang.String QUEUE_NAME "queue/SecuredElementUpdateQueue"

gov.nih.nci.caarray.services.security.mageom.mdb.SecuredElementIdUpdaterMDB
public static final java.lang.String CONNECTION_FACTORY_NAME "UIL2ConnectionFactory"
public static final int DEFAULT_MAX_ATTEMPTS 4
public static final long DEFAULT_WAIT_TIME 60000L
public static final java.lang.String QUEUE_NAME "queue/SecuredElementUpdateQueue"

gov.nih.nci.caarray.services.security.mageom.mdb.SecuredElementUpdateMessage
protected static final long serialVersionUID 1234567890L

gov.nih.nci.caarray.services.security.test.Tester
public static final int LOCAL_MODE 1
public static final int REMOTE_MODE 2

gov.nih.nci.caarray.services.test.Tester
public static final int LOCAL_MODE 1
public static final int REMOTE_MODE 2

gov.nih.nci.caarray.services.util.BaseSecuredElement
protected static final long serialVersionUID 1234567890L

gov.nih.nci.caarray.services.util.SecurityConstants
public static final java.lang.String APPLICATION "caarray"
public static final java.lang.String ARRAY_DESIGN_MANAGER_ROLE "ArrayDesignManager"
public static final java.lang.String BIO_MANAGER_ROLE "BiomaterialManager"
public static final java.lang.String CURATOR_ROLE "Curator"
public static final java.lang.String DEVELOPER_ROLE "Developer"
public static final java.lang.String EXP_MANAGER_ROLE "ExperimentManager"
public static final int FAILURE 0
public static final java.lang.String GROUP_NAME "Roles"
public static final java.lang.String MAGEML_MANAGER_ROLE "MAGEMLManager"
public static final java.lang.String PRIMARY_PATH_DELIMITER ";PRIMARY_PATH="
public static final long PRIVATE_VISIBILITY -1L
public static final java.lang.String PROTOCOL_MANAGER_ROLE "ProtocolManager"
public static final java.lang.String PUBLIC_GROUP "Public"
public static final int SUCCESS 1
public static final java.lang.String UNAUTHENTICATED_USER "Public"
public static final java.lang.String USER_MANAGER_ROLE "UserManager"
public static final java.lang.String USER_ROLE "User"
public static final java.lang.String VOCABULARY_MANAGER_ROLE "VocabularyManager"

gov.nih.nci.caarray.services.util.SecurityUtils
public static final int PROTECTION_GROUP_PRIVATE 1
public static final int PROTECTION_GROUP_PUBLIC 0

gov.nih.nci.caarray.services.util.cache.EHCacheHelper
public static final java.lang.String DEFAULT_REGION "ojbDefault"

gov.nih.nci.caarray.services.util.cache.JCSHelper
public static final java.lang.String DEFAULT_REGION "carrayDefault"

gov.nih.nci.caarray.services.util.db.ManagerDB
protected static final int CASCADE_LINK 19
protected static final int CASCADE_NONE 17
protected static final int CASCADE_OBJECT 23
protected static final long ID_UNSET 0L

gov.nih.nci.caarray.services.util.db.PersistenceBrokerManager
public static final java.lang.String OJB_TX_MODE "ojb.tx.mode"
public static final java.lang.String PROFILE_CAARRAY "PROFILE_MAGE_CAARRAY"
public static final java.lang.String PROFILE_MAGEML_EXPORT "PROFILE_MAGEML_EXPORT"
public static final java.lang.String PROFILE_MAGEML_IMPORT "PROFILE_MAGEML_IMPORT"
public static final java.lang.String TX_MODE_LOCAL "LOCAL"

gov.nih.nci.caarray.services.util.jms.DefaultJMSMessageHandler
public static final java.lang.String DEFAULT_QUEUE_CONN_FACT "UIL2ConnectionFactory"
public static final java.lang.String DEFAULT_TOPIC_CONN_FACT "UIL2ConnectionFactory"

gov.nih.nci.caarray.services.util.netcdf.test.Tester
public static final int LOCAL_MODE 1
public static final int REMOTE_MODE 2

gov.nih.nci.caarray.services.util.properties.CaArrayProperties
public static final java.lang.String ARRAY_DESIGN_FTP_DIR "caarray.ftp.arraydesign"
public static final java.lang.String CAAMEL_CAARRAY_SERVERKEY "caamel.caarray.serverkey.name"
public static final java.lang.String CAAMEL_URL "caamel.url"
public static final java.lang.String CAARRAY_ADMIN_EMAIL "adminEmail"
public static final java.lang.String CAARRAY_DATASOURCE "caarray.datasource"
public static final java.lang.String CAARRAY_DATASOURCE_PASSWORD "caarray.datasource.password"
public static final java.lang.String CAARRAY_DATASOURCE_USER "caarray.datasource.user"
public static final java.lang.String CURATOR_EMAIL "curatorEmail"
public static final java.lang.String EXPERIMENT_FTP_DIR "caarray.ftp.experiment"
public static final java.lang.String FTP_ACTION_COMMAND "caarray.ftp.actionCommand"
public static final java.lang.String FTP_APPLET_JAR "caarray.ftp.appletJar"
public static final java.lang.String FTP_DESTINATION "caarray.ftp.destination"
public static final java.lang.String FTP_ENDJMPTO_URL "caarray.ftp.endJumptoUrl"
public static final java.lang.String FTP_PASSWORD "caarray.ftp.password"
public static final java.lang.String FTP_SERVER_URL "caarray.ftp.serverURL"
public static final java.lang.String FTP_USERNAME "caarray.ftp.username"
public static final java.lang.String HTTP_APPLET_JAR "caarray.http.uploadapplet.appletJar"
public static final java.lang.String HTTP_TUNNELING_URL "caarray.http.uploadapplet.httpTunnelingURL"
public static final java.lang.String HTTP_UPLOAD_AFFYMETRIX "caarray.http.uploadapplet.affymetrix"
public static final java.lang.String HTTP_UPLOAD_AGILENT "caarray.http.uploadapplet.agilent"
public static final java.lang.String HTTP_UPLOAD_ARRAYDESIGN_AFFYMETRIX_CDF "caarray.http.uploadapplet.arraydesign.affymetrix.cdf"
public static final java.lang.String HTTP_UPLOAD_ARRAYDESIGN_DEFAULT_TO "caarray.http.uploadapplet.arraydesign.defaultTo"
public static final java.lang.String HTTP_UPLOAD_ARRAYDESIGN_GENEPIX "caarray.http.uploadapplet.arraydesign.genepix"
public static final java.lang.String HTTP_UPLOAD_ARRAYDESIGN_ILLUMINA "caarray.http.uploadapplet.arraydesign.illumina"
public static final java.lang.String HTTP_UPLOAD_ARRAYDESIGN_NOTIFY_URL "caarray.http.uploadapplet.arraydesign.notifyURL"
public static final java.lang.String HTTP_UPLOAD_GENEPIX "caarray.http.uploadapplet.genepix"
public static final java.lang.String HTTP_UPLOAD_HYBRIDIZATION_DEFAULT_TO "caarray.http.uploadapplet.hybridization.defaultTo"
public static final java.lang.String HTTP_UPLOAD_HYBRIDIZATION_NOTIFY_URL "caarray.http.uploadapplet.hybridization.notifyURL"
public static final java.lang.String HTTP_UPLOAD_ILLUMINA "caarray.http.uploadapplet.illumina"
public static final java.lang.String HTTP_UPLOAD_IMAGENE "caarray.http.uploadapplet.imagene"
public static final java.lang.String HTTP_UPLOAD_MAGEML "caarray.http.uploadapplet.mageml"
public static final java.lang.String HTTP_UPLOAD_MAGEML_DEFAULT_TO "caarray.http.uploadapplet.mageml.defaultTo"
public static final java.lang.String HTTP_UPLOAD_MAGEML_NOTIFY_URL "caarray.http.uploadapplet.mageml.notifyURL"
public static final java.lang.String HTTP_UPLOAD_SERVLET_URL "caarray.http.uploadapplet.servletURL"
public static final java.lang.String HTTP_UPLOAD_UCSF "caarray.http.uploadapplet.ucsf"
public static final java.lang.String MAGE_IDENTIFIER_NAME_SPACE "mage.identifier.namespace"
public static final java.lang.String MAGEML_DTD_LOCATION "mageml.dtd.location"
public static final java.lang.String OJB_MAGEML_EXPORT_REPOSITORY "ojb.repository.mageml.export"
public static final java.lang.String OJB_MAGEML_IMPORT_REPOSITORY "ojb.repository.mageml.import"
public static final java.lang.String OJB_MAGEML_JCD_ALIAS "ojb.repository.mageml.jcdalias"
public static final java.lang.String PARSING_TRANSACTION_TIMEOUT "caarray.parsing.transaction.timeout"
public static final java.lang.String REGISTRATION_EMAIL "regEmail"
public static final java.lang.String REGISTRATION_EMAIL_SUBJECT "caarray-registration.email.subject"
public static final java.lang.String SECURITY_DATASOURCE "security.datasource"
public static final java.lang.String SECURITY_DATASOURCE_PASSWORD "security.datasource.password"
public static final java.lang.String SECURITY_DATASOURCE_USER "security.datasource.user"
public static final java.lang.String SMTP_SERVER "smtp.server.hostname"

gov.nih.nci.caarray.ui.StringFormatter
public static final java.lang.String breaker "<br>"
public static final java.lang.String htmlSpace "&nbsp;&nbsp;&nbsp;&nbsp;"
public static final java.lang.String newline "\r\n"
public static final java.lang.String space " "
public static final java.lang.String tab "\t"

gov.nih.nci.caarray.ui.UIConstants
public static final java.lang.String ACCESS_DENIED_EXCEPTION_MSG "caArrayAccessDeniedException"
public static final java.lang.String ACTION_ADD "add"
public static final java.lang.String ACTION_SETUP "setup"
public static final java.lang.String CEL_FILE "CEL"
public static final java.lang.String CHP_FILE "CHP"
public static final java.lang.String DISPLAY_TAG_PAGE "d-49653-p"
public static final int DISPLAY_TAG_SIZE 20
public static final java.lang.String EXP_FILE "EXP"
public static final java.lang.String FORWARD_CANCEL "cancel"
public static final java.lang.String FORWARD_SUCCESS "success"
public static final java.lang.String GENERAL_EXCEPTION_MSG "caArrayGeneralException"
public static final java.lang.String GPR_FILE "GPR"
public static final java.lang.String GPS_FILE "GPS"
public static final java.lang.String INSERT_OBJECT_EXCEPTION_MSG "caArrayInsertObjectException"
public static final java.lang.String OBJECT_IN_USE_EXCEPTION_MSG "caArrayObjectInUseException"
public static final java.lang.String OBJECT_NOT_FOUND_EXCEPTION_MSG "caArrayObjectNotFoundException"
public static final java.lang.String OTHER_FILE "OTHER"
public static final java.lang.String SECURITY_EXCEPTION_MSG "systemSecurityException"
public static final java.lang.String TXT_FILE "TXT"
public static final java.lang.String VISIBILITY_NOT_SELECTED "notSelected"
public static final java.lang.String VISIBILITY_SELECTED "selected"

gov.nih.nci.caarray.ui.arraydesign.ArrayDesignConstants
public static final java.lang.String REPORTER_TYPE_GENBANK "GenBank"
public static final java.lang.String REPORTER_TYPE_UNIGENE "Unigene"
public static final int UPLOAD_TYPE_AFFYMETRIX_CDF 4
public static final java.lang.String UPLOAD_TYPE_AFFYMETRIX_CDF_DB "Affymetrix CDF"
public static final java.lang.String UPLOAD_TYPE_AFFYMETRIX_CDF_DISPLAY "Affymetrix CDF"
public static final int UPLOAD_TYPE_GAL 2
public static final java.lang.String UPLOAD_TYPE_GAL_DB "GAL"
public static final java.lang.String UPLOAD_TYPE_GAL_DISPLAY "GAL file"
public static final int UPLOAD_TYPE_ILLUMINA 5
public static final java.lang.String UPLOAD_TYPE_ILLUMINA_DB "Illumina Content Descriptor CSV"
public static final java.lang.String UPLOAD_TYPE_ILLUMINA_DISPLAY "Illumina Content Descriptor CSV"
public static final int UPLOAD_TYPE_MAGEML 1
public static final java.lang.String UPLOAD_TYPE_MAGEML_DB "MAGE-ML"
public static final java.lang.String UPLOAD_TYPE_MAGEML_DISPLAY "MAGE-ML"
public static final int UPLOAD_TYPE_UCSF_SPOT_GAL 3
public static final java.lang.String UPLOAD_TYPE_UCSF_SPOT_GAL_DB "GAL"
public static final java.lang.String UPLOAD_TYPE_UCSF_SPOT_GAL_DISPLAY "GAL converted from UCSF Spot"

gov.nih.nci.caarray.ui.biomaterial.BiomaterialConstants
public static final java.lang.String LIST_MATERIAL_TYPES "listMaterialTypes"
public static final java.lang.String LIST_TAXON_TYPES "listTaxonTypes"
public static final java.lang.String LIST_TREATMENT_TYPES "listTreatmentTypes"
public static final java.lang.String LIST_UNIT_TYPES "listUnitTypes"
public static final java.lang.String STORED_BIOSOURCE "storedBiosource"
public static final java.lang.String STORED_TREATMENT2_FORM "storedTreatment2Form"
public static final java.lang.String TREATMENT_EVENTS "treatmentEvents"

gov.nih.nci.caarray.ui.core.CustomMultipartRequestHandler
public static final long DEFAULT_SIZE_MAX 262144000L
public static final int DEFAULT_SIZE_THRESHOLD 262144

gov.nih.nci.caarray.ui.ontology.OntologyConstants
public static final java.lang.String CELLLINE_JSP_PREFIX "cellLine"
public static final java.lang.String CELLTYPE_JSP_PREFIX "cellType"
public static final java.lang.String DEVELSTAGE_JSP_PREFIX "developmentalStage"
public static final java.lang.String DISEASE_STAGE_JSP_PREFIX "diseaseStage"
public static final java.lang.String DISEASE_STATE_JSP_PREFIX "diseaseState"
public static final java.lang.String ONT_SEARCH_ACCNUM "ontSearchAccNumb"
public static final java.lang.String ONT_SEARCH_DBNAME "ontSearchDbName"
public static final java.lang.String ONT_SEARCH_ECOCULT "ontSearchEcoCult"
public static final java.lang.String ONT_SEARCH_NAME "ontSearchName"
public static final java.lang.String ONT_SEARCH_RESULTS "ontSearchResults"
public static final java.lang.String ORGPART_JSP_PREFIX "organismPart"
public static final java.lang.String STRAINORLINE_JSP_PREFIX "strainOrLine"
public static final java.lang.String TUMORGRADING_JSP_PREFIX "tumorGrading"

org.biomage.*

org.biomage.Array.ArrayGroup.OrientationMarkPosition
public final int bottom 1
public final int left 2
public final int right 3
public final int top 0

org.biomage.AuditAndSecurity.Audit.Action
public final int creation 0
public final int modification 1

org.biomage.BioAssayData.BioDataCube.Order
public final int BDQ 0
public final int BQD 1
public final int DBQ 2
public final int DQB 3
public final int QBD 4
public final int QDB 5

org.biomage.BioSequence.SeqFeature.Basis
public final int both 2
public final int computational 1
public final int experimental 0
public final int NA 4
public final int unknown 3

org.biomage.Measurement.ConcentrationUnit.UnitNameCV
public final int fM 5
public final int g_per_L 8
public final int gram_percent 9
public final int M 0
public final int mg_per_mL 6
public final int mL_per_L 7
public final int mM 1
public final int nM 2
public final int other 13
public final int percent_vol_per_vol 10
public final int percent_weight_per_vol 11
public final int percent_weight_per_weight 12
public final int pM 4
public final int uM 3

org.biomage.Measurement.DistanceUnit.UnitNameCV
public final int A 5
public final int cm 3
public final int m 4
public final int mm 2
public final int nm 0
public final int other 6
public final int um 1

org.biomage.Measurement.MassUnit.UnitNameCV
public final int fg 6
public final int g 1
public final int kg 0
public final int mg 2
public final int ng 4
public final int other 7
public final int pg 5
public final int ug 3

org.biomage.Measurement.Measurement.KindCV
public final int concentration 6
public final int distance 1
public final int mass 4
public final int other 7
public final int quantity 3
public final int temperature 2
public final int time 0
public final int volume 5

org.biomage.Measurement.Measurement.Type
public final int absolute 0
public final int change 1

org.biomage.Measurement.QuantityUnit.UnitNameCV
public final int amol 1
public final int fmol 2
public final int mol 0
public final int molecules 6
public final int nmol 4
public final int other 7
public final int pmol 3
public final int umol 5

org.biomage.Measurement.TemperatureUnit.UnitNameCV
public final int degrees_C 0
public final int degrees_F 1
public final int K 2

org.biomage.Measurement.TimeUnit.UnitNameCV
public final int days 3
public final int hours 4
public final int minutes 5
public final int months 1
public final int ms 8
public final int other 9
public final int seconds 6
public final int us 7
public final int weeks 2
public final int years 0

org.biomage.Measurement.VolumeUnit.UnitNameCV
public final int cc 1
public final int dl 2
public final int fl 7
public final int L 3
public final int ml 0
public final int nl 5
public final int other 8
public final int pl 6
public final int ul 4

org.biomage.tools.apps.annot.GuiSet
public static final int B 1
public static final int C 10
public static final int E 13
public static final int H 2
public static final int N 11
public static final int NE 12
public static final int NONE 0
public static final int NW 18
public static final int RELATIVE -1
public static final int REMAINDER 0
public static final int S 15
public static final int SE 14
public static final int SW 16
public static final int V 3
public static final int W 17

org.biomage.tools.apps.annot.MageXMLConverter
public static final int PAGE_X 450
public static final int PAGE_Y 500

org.biomage.tools.apps.annot.PagePanel
public static final int LED_SIZE 20
public static final java.lang.String NO_SPACE "No space is allowed at beginning."
public static final java.lang.String REQUIRED "This is a required field."
public static final int TEXT_WIDTH 10

org.biomage.tools.generate_classes.CreateFile
public static final int JAVA_INTERFACE 3
public static final int UML_CLASS 2
public static final int UML_MODEL 0
public static final int UML_PACKAGE 1

org.biomage.tools.generate_classes.CreateMageClasses
protected static final java.lang.String DEFAULT_PATH "org.biomage"

org.biomage.tools.generate_classes.CreateMageDTDClasses
protected static final java.lang.String DEFAULT_PATH "org.biomage"

org.biomage.tools.generate_classes.XMIParseHelpers
public static final int AGGREGATE 1
public static final int COMPOSITE 2
public static final int NOT_AGGR 0
public static final java.lang.String tobeIdentifiable "Identifiable"

org.biomage.tools.generate_er.CreateMageER
public static final java.lang.String ABSTRACT "true"
public static final java.lang.String aLine "--------------------"
public static final java.lang.String DATA "&data_table;"
public static final java.lang.String FALSE "false"
public static final java.lang.String FIRSTLINE "<?xml version=\"1.0\" standalone=\"no\"?>\n"
public static final java.lang.String FOREIGNKEY "_fk"
public static final java.lang.String HALF_INDENT " "
public static final java.lang.String ID "ID"
public static final java.lang.String INDENT " "
public static final java.lang.String INTEGER "int"
public static final java.lang.String LINKING "&linking_table;"
public static final java.lang.String LINKING_FKEY "&fkey_mtm;"
public static final java.lang.String LOOKUP_FKEY "&fkey_lookup;"
public static final java.lang.String NO_BASE_CLASS "none"
public static final java.lang.String NOT_ABSTRACT "false"
public static final java.lang.String NOT_NULL "true"
public static final java.lang.String NULL "false"
public static final java.lang.String ONE_TO_MANY "&fkey_otm;"
public static final java.lang.String ONE_TO_ONE "&fkey_oto;"
public static final java.lang.String PRIMARY_KEY "Primary Key"
public static final java.lang.String SECONDLINE "<!DOCTYPE table SYSTEM \"table.dtd\">\n"
public static final java.lang.String SERIAL "Serial"
public static final java.lang.String SUBSET "&subset_table;"
public static final java.lang.String TRUE "true"
public static final java.lang.String VALIDATION "&validation_table;"
public static final java.lang.String VIEW "&view;"

org.biomage.tools.helpers.OntologyHelper
protected static final java.lang.String PARSER_NAME "org.apache.xerces.parsers.SAXParser"