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java.lang.Objectorg.biomage.Common.Extendable
org.biomage.Common.Describable
org.biomage.Protocol.ParameterizableApplication
org.biomage.Protocol.SoftwareApplication
public class SoftwareApplication
The use of a piece of software with the requisite Parameters and ParameterValues.
Nested Class Summary |
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Nested classes/interfaces inherited from interface org.biomage.Interface.HasParameterValues |
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HasParameterValues.ParameterValues_list |
Nested classes/interfaces inherited from interface org.biomage.Interface.HasAuditTrail |
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HasAuditTrail.AuditTrail_list |
Nested classes/interfaces inherited from interface org.biomage.Interface.HasDescriptions |
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HasDescriptions.Descriptions_list |
Nested classes/interfaces inherited from interface org.biomage.Interface.HasPropertySets |
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HasPropertySets.PropertySets_list |
Field Summary | |
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protected Software |
software
The underlying software. |
Fields inherited from class org.biomage.Protocol.ParameterizableApplication |
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parameterValues |
Fields inherited from class org.biomage.Common.Describable |
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security |
Fields inherited from class org.biomage.Common.Extendable |
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editable, id, securedElementId |
Constructor Summary | |
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SoftwareApplication()
Default constructor. |
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SoftwareApplication(org.xml.sax.Attributes atts)
Attribute constructor. |
Method Summary | |
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boolean |
emptyMAGEobject()
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java.lang.String |
getModelClassName()
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java.util.Date |
getReleaseDate()
Get method for releaseDate |
Software |
getSoftware()
Get method for software |
java.lang.String |
getVersion()
Get method for version |
void |
setReleaseDate(java.util.Date releaseDate)
Set method for releaseDate |
void |
setSoftware(Software software)
Set method for software |
void |
setVersion(java.lang.String version)
Set method for version |
void |
writeAssociations(java.io.Writer out)
writeAssociations This method is responsible for assembling the association data into XML. |
void |
writeAttributes(java.io.Writer out)
writeAttributes This method is responsible for assembling the attribute data into XML. |
void |
writeMAGEML(java.io.Writer out)
writeMAGEML This method is responsible for assembling the attribute and association data into XML. |
Methods inherited from class org.biomage.Protocol.ParameterizableApplication |
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addToParameterValues, addToParameterValues, getFromParameterValues, getParameterValues, removeElementAtFromParameterValues, removeFromParameterValues, setParameterValues |
Methods inherited from class org.biomage.Common.Describable |
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addToAuditTrail, addToAuditTrail, addToDescriptions, addToDescriptions, getAuditTrail, getDescriptions, getFromAuditTrail, getFromDescriptions, getSecurity, removeElementAtFromAuditTrail, removeElementAtFromDescriptions, removeFromAuditTrail, removeFromDescriptions, setAttributes, setAuditTrail, setDescriptions, setSecurity |
Methods inherited from class org.biomage.Common.Extendable |
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addToPropertySets, addToPropertySets, equals, getFromPropertySets, getId, getIsEditable, getPropertySets, getSecuredElementId, isEditable, removeElementAtFromPropertySets, removeFromPropertySets, setId, setIsEditable, setPropertySets, setSecuredElementId, toString |
Methods inherited from class java.lang.Object |
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clone, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
Field Detail |
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protected Software software
Constructor Detail |
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public SoftwareApplication()
public SoftwareApplication(org.xml.sax.Attributes atts)
atts:
- the attribute list.Method Detail |
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public void writeMAGEML(java.io.Writer out) throws java.io.IOException
writeMAGEML
in class ParameterizableApplication
java.io.IOException
public boolean emptyMAGEobject()
public void writeAttributes(java.io.Writer out) throws java.io.IOException
writeAttributes
in class ParameterizableApplication
java.io.IOException
public void writeAssociations(java.io.Writer out) throws java.io.IOException
writeAssociations
in class ParameterizableApplication
java.io.IOException
public void setVersion(java.lang.String version)
value
- to setpublic java.lang.String getVersion()
public void setReleaseDate(java.util.Date releaseDate)
value
- to setpublic java.util.Date getReleaseDate()
public java.lang.String getModelClassName()
getModelClassName
in class ParameterizableApplication
public void setSoftware(Software software)
setSoftware
in interface HasSoftware
value
- to setpublic Software getSoftware()
getSoftware
in interface HasSoftware
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