gov.nih.nci.caarray.services.fileparse
Class CaArrayToMageConversion

java.lang.Object
  extended by gov.nih.nci.caarray.services.fileparse.CaArrayToMageConversion

public class CaArrayToMageConversion
extends java.lang.Object

Author:
gustafsons Converts parsing objects to MAGE objects

Field Summary
protected static org.apache.log4j.Logger logger_
          Logger used by an instance of this class.
 
Constructor Summary
CaArrayToMageConversion()
           
 
Method Summary
static BioAssay[] getMageTypesForBioAssays(ParsingBioAssay[] inArray)
           
static DesignElement[] getMageTypesForDesignElements(ParsingDesignElement[] inArray, UploadFileTypes.MICROARRAY_FILE_TYPE type)
           
static QuantitationType[] getMageTypesForParsingTypes(ParsingQuantitationType[] inArray)
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

logger_

protected static org.apache.log4j.Logger logger_
Logger used by an instance of this class.

Constructor Detail

CaArrayToMageConversion

public CaArrayToMageConversion()
Method Detail

getMageTypesForParsingTypes

public static QuantitationType[] getMageTypesForParsingTypes(ParsingQuantitationType[] inArray)
Parameters:
inArray -
Returns:
Mage quantitation types

getMageTypesForDesignElements

public static DesignElement[] getMageTypesForDesignElements(ParsingDesignElement[] inArray,
                                                            UploadFileTypes.MICROARRAY_FILE_TYPE type)
Parameters:
inArray -
Returns:
Mage Design Elements

getMageTypesForBioAssays

public static BioAssay[] getMageTypesForBioAssays(ParsingBioAssay[] inArray)
Parameters:
inArray -
Returns:
Mage Bioassays