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Uses of DesignElement in gov.nih.nci.caarray.services.fileparse |
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Methods in gov.nih.nci.caarray.services.fileparse that return DesignElement | |
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static DesignElement[] |
CaArrayToMageConversion.getMageTypesForDesignElements(ParsingDesignElement[] inArray,
UploadFileTypes.MICROARRAY_FILE_TYPE type)
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Methods in gov.nih.nci.caarray.services.fileparse with parameters of type DesignElement | |
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void |
FileParseManagerDB.createBioAssayData(java.lang.Long bioAssayId,
java.lang.Long experimentId,
DesignElement[] designElements,
QuantitationType[] mageTypes,
java.lang.Long arrayDesignId)
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Uses of DesignElement in gov.nih.nci.caarray.services.fileparse2 |
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Methods in gov.nih.nci.caarray.services.fileparse2 with parameters of type DesignElement | |
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void |
HybridizationManagerDB.createBioAssayData(long bioAssayId,
long experimentId,
long arrayDesignId,
DesignElement[] designElements,
QuantitationType[] quantitationTypes)
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Uses of DesignElement in gov.nih.nci.caarray.services.util.netcdf |
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Methods in gov.nih.nci.caarray.services.util.netcdf with parameters of type DesignElement | |
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java.lang.Object |
NETCDFFileReader.getBioAssayDatum(BioAssay assay,
QuantitationType quantitationType,
DesignElement designElement)
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Constructors in gov.nih.nci.caarray.services.util.netcdf with parameters of type DesignElement | |
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NETCDFCreator(DesignElement[] designElementDimension,
QuantitationType[] quantitationTypeDimension,
BioAssay[] bioAssayDimension)
Constructs the class with the neccessary items as arrays |
Uses of DesignElement in org.biomage.BioAssayData |
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Fields in org.biomage.BioAssayData declared as DesignElement | |
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protected DesignElement |
DesignElementTuple.designElement
The DesignElement associated with the value of the BioAssayDatum. |
Methods in org.biomage.BioAssayData that return DesignElement | |
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DesignElement |
DesignElementTuple.getDesignElement()
Get method for designElement |
Methods in org.biomage.BioAssayData with parameters of type DesignElement | |
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void |
DesignElementTuple.setDesignElement(DesignElement designElement)
Set method for designElement |
Uses of DesignElement in org.biomage.DesignElement |
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Subclasses of DesignElement in org.biomage.DesignElement | |
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class |
CompositeSequence
A collection of Reporter or CompositeSequence Design Elements, annotated through the association to BioSequence. |
class |
Feature
An intended position on an array. |
class |
Reporter
A Design Element that represents some biological material (clone, oligo, etc.) on an array which will report on some biosequence or biosequences. |
Uses of DesignElement in org.biomage.Interface |
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Methods in org.biomage.Interface that return DesignElement | |
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DesignElement |
HasDesignElement.getDesignElement()
Get method for designElement |
Methods in org.biomage.Interface with parameters of type DesignElement | |
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void |
HasDesignElement.setDesignElement(DesignElement designElement)
Set method for designElement |
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