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public interface ReporterCompositeMap
A ReporterCompositeMap is the description of how source Reporters are transformed into a target CompositeSequences. For instance, several reporters that tile across a section of a chromosome could be mapped to a CompositeSequence.
| Method Summary | |
|---|---|
CompositeSequence |
getCompositeSequence()
Returns the value of this ReporterCompositeMap object's compositeSequence attribute. |
ReporterPosition[] |
getReporterPositionSources()
Returns the value of this ReporterCompositeMap object's reporterPositionSources attribute. |
void |
setCompositeSequence(CompositeSequence p_compositeSequence)
Sets the compositeSequence attribute. |
void |
setReporterPositionSources(ReporterPosition[] p_reporterPositionSources)
Sets the reporterPositionSources attribute. |
| Methods inherited from interface gov.nih.nci.mageom.domain.BioEvent.BioEvent |
|---|
getProtocolApplications, setProtocolApplications |
| Methods inherited from interface gov.nih.nci.mageom.domain.Identifiable |
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getIdentifier, getName, setIdentifier, setName |
| Methods inherited from interface gov.nih.nci.mageom.domain.Describable |
|---|
getAuditTrail, getDescriptions, getSecurity, setAuditTrail, setDescriptions, setSecurity |
| Methods inherited from interface gov.nih.nci.mageom.domain.Extendable |
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getPropertySets, setPropertySets |
| Method Detail |
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void setReporterPositionSources(ReporterPosition[] p_reporterPositionSources)
ReporterCompositeMap object.
p_reporterPositionSources - The new value for reporterPositionSources.getReporterPositionSources()ReporterPosition[] getReporterPositionSources()
ReporterCompositeMap object's reporterPositionSources attribute.
gov.nih.nci.mageom.bean.DesignElement.ReporterPosition[] The value of reporterPositionSources.ReporterPositionvoid setCompositeSequence(CompositeSequence p_compositeSequence)
ReporterCompositeMap object.
p_compositeSequence - The new value for compositeSequence.getCompositeSequence()CompositeSequence getCompositeSequence()
ReporterCompositeMap object's compositeSequence attribute.
gov.nih.nci.mageom.bean.DesignElement.CompositeSequence The value of compositeSequence.CompositeSequence
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