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java.lang.Objectgov.nih.nci.mageom.domain.impl.MAGEOMObject
gov.nih.nci.mageom.domain.impl.ExtendableImpl
gov.nih.nci.mageom.domain.impl.DescribableImpl
gov.nih.nci.mageom.domain.impl.IdentifiableImpl
gov.nih.nci.mageom.domain.BioEvent.impl.BioEventImpl
gov.nih.nci.mageom.domain.BioAssay.impl.BioAssayCreationImpl
public class BioAssayCreationImpl
The process by which an array and one or more biomaterials are combined to create a bioAssayCreation.
| Field Summary | |
|---|---|
protected static java.util.ArrayList |
allAssociationMethods
|
protected Array |
array
DOCUMENT ME |
protected java.lang.Long |
arrayId
The internal ID of the associated array object. |
protected static java.util.Hashtable |
associationMethods
|
protected PhysicalBioAssay |
physicalBioAssayTarget
DOCUMENT ME |
protected java.lang.Long |
physicalBioAssayTargetId
The internal ID of the associated physicalBioAssayTarget object. |
protected BioMaterialMeasurement[] |
sourceBioMaterialMeasurements
DOCUMENT ME |
protected int |
sourceBioMaterialMeasurementsCount
The count of BioMaterialMeasurement objects. |
| Fields inherited from class gov.nih.nci.mageom.domain.BioEvent.impl.BioEventImpl |
|---|
protocolApplications, protocolApplicationsCount |
| Fields inherited from class gov.nih.nci.mageom.domain.impl.IdentifiableImpl |
|---|
identifier, name |
| Fields inherited from class gov.nih.nci.mageom.domain.impl.DescribableImpl |
|---|
auditTrail, auditTrailCount, descriptions, descriptionsCount, security, securityId |
| Fields inherited from class gov.nih.nci.mageom.domain.impl.ExtendableImpl |
|---|
propertySets, propertySetsCount, securedElementId |
| Constructor Summary | |
|---|---|
BioAssayCreationImpl()
Default constructor |
|
| Method Summary | |
|---|---|
Array |
getArray()
Returns the value of this BioAssayCreation object's array attribute. |
PhysicalBioAssay |
getPhysicalBioAssayTarget()
Returns the value of this BioAssayCreation object's physicalBioAssayTarget attribute. |
BioMaterialMeasurement[] |
getSourceBioMaterialMeasurements()
Returns the value of this BioAssayCreation object's sourceBioMaterialMeasurements attribute. |
int |
getSourceBioMaterialMeasurementsCount()
Returns the count of all BioMaterialMeasurement
associated with this BioAssayCreation object. |
java.util.Hashtable |
getXMLMethodDescriptors()
Returns a Hashtable containing XMLMethodDescriptors descriptors of
the association methods of this object. |
protected void |
init()
|
BioAssayCreation[] |
searchBioAssayCreations(BioAssayCreationSearchCriteria criteria)
Returns an array of BioAssayCreation objects that
satisfy the given BioAssayCreationSearchCriteria. |
void |
setArray(Array p_array)
Sets the array attribute. |
void |
setPhysicalBioAssayTarget(PhysicalBioAssay p_physicalBioAssayTarget)
Sets the physicalBioAssayTarget attribute. |
void |
setSourceBioMaterialMeasurements(BioMaterialMeasurement[] p_sourceBioMaterialMeasurements)
Sets the sourceBioMaterialMeasurements attribute. |
java.lang.String |
toString()
Returns a String representation of this object suitable for console display. |
org.w3c.dom.Element |
toXML(org.w3c.dom.Document doc)
|
org.w3c.dom.Element |
toXMLDoc(org.w3c.dom.Document doc)
|
org.w3c.dom.Element |
toXMLProcessor(org.w3c.dom.Document doc,
java.util.ArrayList fillOutValues)
Returns an XML representation of the object. |
| Methods inherited from class gov.nih.nci.mageom.domain.BioEvent.impl.BioEventImpl |
|---|
getProtocolApplications, getProtocolApplicationsCount, searchBioEvents, setProtocolApplications |
| Methods inherited from class gov.nih.nci.mageom.domain.impl.IdentifiableImpl |
|---|
getIdentifier, getName, searchIdentifiables, setIdentifier, setName |
| Methods inherited from class gov.nih.nci.mageom.domain.impl.DescribableImpl |
|---|
getAuditTrail, getAuditTrailCount, getDescriptions, getDescriptionsCount, getSecurity, searchDescribables, setAuditTrail, setDescriptions, setSecurity |
| Methods inherited from class gov.nih.nci.mageom.domain.impl.ExtendableImpl |
|---|
getPropertySets, getPropertySetsCount, getSecuredElementId, searchExtendables, setPropertySets, setSecuredElementId |
| Methods inherited from class gov.nih.nci.mageom.domain.impl.MAGEOMObject |
|---|
getId, getIsEditable, setId |
| Methods inherited from class java.lang.Object |
|---|
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
| Methods inherited from interface gov.nih.nci.mageom.domain.BioEvent.BioEvent |
|---|
getProtocolApplications, setProtocolApplications |
| Methods inherited from interface gov.nih.nci.mageom.domain.Identifiable |
|---|
getIdentifier, getName, setIdentifier, setName |
| Methods inherited from interface gov.nih.nci.mageom.domain.Describable |
|---|
getAuditTrail, getDescriptions, getSecurity, setAuditTrail, setDescriptions, setSecurity |
| Methods inherited from interface gov.nih.nci.mageom.domain.Extendable |
|---|
getPropertySets, setPropertySets |
| Field Detail |
|---|
protected static java.util.ArrayList allAssociationMethods
protected static java.util.Hashtable associationMethods
protected Array array
protected java.lang.Long arrayId
protected int sourceBioMaterialMeasurementsCount
protected BioMaterialMeasurement[] sourceBioMaterialMeasurements
protected PhysicalBioAssay physicalBioAssayTarget
protected java.lang.Long physicalBioAssayTargetId
| Constructor Detail |
|---|
public BioAssayCreationImpl()
| Method Detail |
|---|
protected void init()
init in class BioEventImpl
public BioAssayCreation[] searchBioAssayCreations(BioAssayCreationSearchCriteria criteria)
throws gov.nih.nci.common.search.SearchException
BioAssayCreation objects that
satisfy the given BioAssayCreationSearchCriteria.
criteria - The BioAssayCreationSearchCriteria
which represents a query for BioAssayCreation objects.
BioAssayCreation objects.
A - gov.nih.nci.common.search.SearchException if there is a problem searching.
gov.nih.nci.common.search.SearchExceptionpublic void setArray(Array p_array)
BioAssayCreation object.
setArray in interface BioAssayCreationp_array - The new value for array.BioAssayCreation.getArray()public Array getArray()
BioAssayCreationBioAssayCreation object's array attribute.
getArray in interface BioAssayCreationgov.nih.nci.mageom.bean.Array.Array The value of array.BioAssayCreation.getArray()public void setSourceBioMaterialMeasurements(BioMaterialMeasurement[] p_sourceBioMaterialMeasurements)
BioAssayCreation object.
setSourceBioMaterialMeasurements in interface BioAssayCreationp_sourceBioMaterialMeasurements - The new value for sourceBioMaterialMeasurements.BioAssayCreation.getSourceBioMaterialMeasurements()public BioMaterialMeasurement[] getSourceBioMaterialMeasurements()
BioAssayCreationBioAssayCreation object's sourceBioMaterialMeasurements attribute.
getSourceBioMaterialMeasurements in interface BioAssayCreationgov.nih.nci.mageom.bean.BioMaterial.BioMaterialMeasurement[] The value of sourceBioMaterialMeasurements.BioAssayCreation.getSourceBioMaterialMeasurements()public void setPhysicalBioAssayTarget(PhysicalBioAssay p_physicalBioAssayTarget)
BioAssayCreation object.
setPhysicalBioAssayTarget in interface BioAssayCreationp_physicalBioAssayTarget - The new value for physicalBioAssayTarget.BioAssayCreation.getPhysicalBioAssayTarget()public PhysicalBioAssay getPhysicalBioAssayTarget()
BioAssayCreationBioAssayCreation object's physicalBioAssayTarget attribute.
getPhysicalBioAssayTarget in interface BioAssayCreationgov.nih.nci.mageom.bean.BioAssay.PhysicalBioAssay The value of physicalBioAssayTarget.BioAssayCreation.getPhysicalBioAssayTarget()public int getSourceBioMaterialMeasurementsCount()
BioMaterialMeasurement
associated with this BioAssayCreation object.
BioAssayCreation.getSourceBioMaterialMeasurements()public org.w3c.dom.Element toXML(org.w3c.dom.Document doc)
toXML in class BioEventImplpublic org.w3c.dom.Element toXMLDoc(org.w3c.dom.Document doc)
toXMLDoc in class BioEventImpl
public org.w3c.dom.Element toXMLProcessor(org.w3c.dom.Document doc,
java.util.ArrayList fillOutValues)
toXMLProcessor in class BioEventImpldoc - the working documentfillOutValues - a list of attribute names that should have
full XML for their values.
public java.util.Hashtable getXMLMethodDescriptors()
XMLMethodDescriptors descriptors of
the association methods of this object.
getXMLMethodDescriptors in class BioEventImplpublic java.lang.String toString()
toString in class BioEventImpl
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