Uses of Interface
gov.nih.nci.mageom.domain.BioSequence.SequencePosition

Packages that use SequencePosition
gov.nih.nci.mageom.domain.BioSequence   
gov.nih.nci.mageom.domain.BioSequence.impl   
gov.nih.nci.mageom.domain.DesignElement   
gov.nih.nci.mageom.domain.DesignElement.impl   
 

Uses of SequencePosition in gov.nih.nci.mageom.domain.BioSequence
 

Methods in gov.nih.nci.mageom.domain.BioSequence that return SequencePosition
 SequencePosition SeqFeatureLocation.getCoordinate()
          Returns the value of this SeqFeatureLocation object's coordinate attribute.
 

Methods in gov.nih.nci.mageom.domain.BioSequence with parameters of type SequencePosition
 void SeqFeatureLocation.setCoordinate(SequencePosition p_coordinate)
          Sets the coordinate attribute.
 

Uses of SequencePosition in gov.nih.nci.mageom.domain.BioSequence.impl
 

Classes in gov.nih.nci.mageom.domain.BioSequence.impl that implement SequencePosition
 class SequencePositionImpl
          Designates the position of the Feature in its BioSequence.
 

Fields in gov.nih.nci.mageom.domain.BioSequence.impl declared as SequencePosition
protected  SequencePosition SeqFeatureLocationImpl.coordinate
          DOCUMENT ME
 

Methods in gov.nih.nci.mageom.domain.BioSequence.impl that return SequencePosition
 SequencePosition SeqFeatureLocationImpl.getCoordinate()
           
 SequencePosition[] SequencePositionImpl.searchSequencePositions(SequencePositionSearchCriteria criteria)
          Returns an array of SequencePosition objects that satisfy the given SequencePositionSearchCriteria.
 

Methods in gov.nih.nci.mageom.domain.BioSequence.impl with parameters of type SequencePosition
 void SeqFeatureLocationImpl.setCoordinate(SequencePosition p_coordinate)
          Sets the coordinate attribute.
 

Uses of SequencePosition in gov.nih.nci.mageom.domain.DesignElement
 

Subinterfaces of SequencePosition in gov.nih.nci.mageom.domain.DesignElement
 interface CompositePosition
          The location in the compositeSequence target's sequence to which a source compositeSequence maps.
 interface ReporterPosition
          The location in the composite target's sequence to which a source reporter maps.
 

Uses of SequencePosition in gov.nih.nci.mageom.domain.DesignElement.impl
 

Classes in gov.nih.nci.mageom.domain.DesignElement.impl that implement SequencePosition
 class CompositePositionImpl
          The location in the compositeSequence target's sequence to which a source compositeSequence maps.
 class ReporterPositionImpl
          The location in the composite target's sequence to which a source reporter maps.