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java.lang.Objectgov.nih.nci.mageom.domain.impl.MAGEOMObject
gov.nih.nci.mageom.domain.impl.ExtendableImpl
gov.nih.nci.mageom.domain.impl.DescribableImpl
gov.nih.nci.mageom.domain.impl.IdentifiableImpl
gov.nih.nci.mageom.domain.BioAssay.impl.ImageImpl
public class ImageImpl
An image is created by an imageAcquisition event, typically by scanning the hybridized array (the PhysicalBioAssay).
| Field Summary | |
|---|---|
protected static java.util.ArrayList |
allAssociationMethods
|
protected static java.util.Hashtable |
associationMethods
|
protected Channel[] |
channels
DOCUMENT ME |
protected int |
channelsCount
The count of Channel objects. |
protected OntologyEntry |
format
DOCUMENT ME |
protected java.lang.Long |
formatId
The internal ID of the associated format object. |
protected java.lang.String |
URI
The file location in which an image may be found. |
| Fields inherited from class gov.nih.nci.mageom.domain.impl.IdentifiableImpl |
|---|
identifier, name |
| Fields inherited from class gov.nih.nci.mageom.domain.impl.DescribableImpl |
|---|
auditTrail, auditTrailCount, descriptions, descriptionsCount, security, securityId |
| Fields inherited from class gov.nih.nci.mageom.domain.impl.ExtendableImpl |
|---|
propertySets, propertySetsCount, securedElementId |
| Constructor Summary | |
|---|---|
ImageImpl()
Default constructor |
|
| Method Summary | |
|---|---|
Channel[] |
getChannels()
Returns the value of this Image object's channels attribute. |
int |
getChannelsCount()
Returns the count of all Channel
associated with this Image object. |
OntologyEntry |
getFormat()
Returns the value of this Image object's format attribute. |
java.lang.String |
getURI()
Returns the value of this Image object's URI attribute. |
java.util.Hashtable |
getXMLMethodDescriptors()
Returns a Hashtable containing XMLMethodDescriptors descriptors of
the association methods of this object. |
protected void |
init()
|
Image[] |
searchImages(ImageSearchCriteria criteria)
Returns an array of Image objects that
satisfy the given ImageSearchCriteria. |
void |
setChannels(Channel[] p_channels)
Sets the channels attribute. |
void |
setFormat(OntologyEntry p_format)
Sets the format attribute. |
void |
setURI(java.lang.String p_URI)
Sets the URI attribute. |
java.lang.String |
toString()
Returns a String representation of this object suitable for console display. |
org.w3c.dom.Element |
toXML(org.w3c.dom.Document doc)
|
org.w3c.dom.Element |
toXMLDoc(org.w3c.dom.Document doc)
|
org.w3c.dom.Element |
toXMLProcessor(org.w3c.dom.Document doc,
java.util.ArrayList fillOutValues)
Returns an XML representation of the object. |
| Methods inherited from class gov.nih.nci.mageom.domain.impl.IdentifiableImpl |
|---|
getIdentifier, getName, searchIdentifiables, setIdentifier, setName |
| Methods inherited from class gov.nih.nci.mageom.domain.impl.DescribableImpl |
|---|
getAuditTrail, getAuditTrailCount, getDescriptions, getDescriptionsCount, getSecurity, searchDescribables, setAuditTrail, setDescriptions, setSecurity |
| Methods inherited from class gov.nih.nci.mageom.domain.impl.ExtendableImpl |
|---|
getPropertySets, getPropertySetsCount, getSecuredElementId, searchExtendables, setPropertySets, setSecuredElementId |
| Methods inherited from class gov.nih.nci.mageom.domain.impl.MAGEOMObject |
|---|
getId, getIsEditable, setId |
| Methods inherited from class java.lang.Object |
|---|
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
| Methods inherited from interface gov.nih.nci.mageom.domain.Identifiable |
|---|
getIdentifier, getName, setIdentifier, setName |
| Methods inherited from interface gov.nih.nci.mageom.domain.Describable |
|---|
getAuditTrail, getDescriptions, getSecurity, setAuditTrail, setDescriptions, setSecurity |
| Methods inherited from interface gov.nih.nci.mageom.domain.Extendable |
|---|
getPropertySets, setPropertySets |
| Field Detail |
|---|
protected static java.util.ArrayList allAssociationMethods
protected static java.util.Hashtable associationMethods
protected java.lang.String URI
protected int channelsCount
protected Channel[] channels
protected OntologyEntry format
protected java.lang.Long formatId
| Constructor Detail |
|---|
public ImageImpl()
| Method Detail |
|---|
protected void init()
init in class IdentifiableImpl
public Image[] searchImages(ImageSearchCriteria criteria)
throws gov.nih.nci.common.search.SearchException
Image objects that
satisfy the given ImageSearchCriteria.
criteria - The ImageSearchCriteria
which represents a query for Image objects.
Image objects.
A - gov.nih.nci.common.search.SearchException if there is a problem searching.
gov.nih.nci.common.search.SearchExceptionpublic void setURI(java.lang.String p_URI)
Image object.
setURI in interface Imagep_URI - The new value for URI.Image.getURI()public java.lang.String getURI()
ImageImage object's URI attribute.
Description of URI:
The file location in which an image may be found.
getURI in interface ImageString The value of URI.Image.getURI()public void setChannels(Channel[] p_channels)
Image object.
setChannels in interface Imagep_channels - The new value for channels.Image.getChannels()public Channel[] getChannels()
ImageImage object's channels attribute.
getChannels in interface Imagegov.nih.nci.mageom.bean.BioAssay.Channel[] The value of channels.Image.getChannels()public void setFormat(OntologyEntry p_format)
Image object.
setFormat in interface Imagep_format - The new value for format.Image.getFormat()public OntologyEntry getFormat()
ImageImage object's format attribute.
getFormat in interface Imagegov.nih.nci.mageom.bean.Description.OntologyEntry The value of format.Image.getFormat()public int getChannelsCount()
Channel
associated with this Image object.
Image.getChannels()public org.w3c.dom.Element toXML(org.w3c.dom.Document doc)
toXML in class IdentifiableImplpublic org.w3c.dom.Element toXMLDoc(org.w3c.dom.Document doc)
toXMLDoc in class IdentifiableImpl
public org.w3c.dom.Element toXMLProcessor(org.w3c.dom.Document doc,
java.util.ArrayList fillOutValues)
toXMLProcessor in class IdentifiableImpldoc - the working documentfillOutValues - a list of attribute names that should have
full XML for their values.
public java.util.Hashtable getXMLMethodDescriptors()
XMLMethodDescriptors descriptors of
the association methods of this object.
getXMLMethodDescriptors in class IdentifiableImplpublic java.lang.String toString()
toString in class IdentifiableImpl
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