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public interface CompositePosition
The location in the compositeSequence target's sequence to which a source compositeSequence maps. The association to MismatchInformation allows the specification, usually for control purposes, of deviations from the CompositeSequence's BioMaterial.
| Method Summary | |
|---|---|
CompositeSequence |
getComposite()
Returns the value of this CompositePosition object's composite attribute. |
MismatchInformation[] |
getMismatchInformation()
Returns the value of this CompositePosition object's mismatchInformation attribute. |
void |
setComposite(CompositeSequence p_composite)
Sets the composite attribute. |
void |
setMismatchInformation(MismatchInformation[] p_mismatchInformation)
Sets the mismatchInformation attribute. |
| Methods inherited from interface gov.nih.nci.mageom.domain.BioSequence.SequencePosition |
|---|
getEnd, getStart, setEnd, setStart |
| Methods inherited from interface gov.nih.nci.mageom.domain.Extendable |
|---|
getPropertySets, setPropertySets |
| Method Detail |
|---|
void setMismatchInformation(MismatchInformation[] p_mismatchInformation)
CompositePosition object.
p_mismatchInformation - The new value for mismatchInformation.getMismatchInformation()MismatchInformation[] getMismatchInformation()
CompositePosition object's mismatchInformation attribute.
gov.nih.nci.mageom.bean.DesignElement.MismatchInformation[] The value of mismatchInformation.MismatchInformationvoid setComposite(CompositeSequence p_composite)
CompositePosition object.
p_composite - The new value for composite.getComposite()CompositeSequence getComposite()
CompositePosition object's composite attribute.
gov.nih.nci.mageom.bean.DesignElement.CompositeSequence The value of composite.CompositeSequence
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