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java.lang.Objectgov.nih.nci.mageom.domain.impl.MAGEOMObject
gov.nih.nci.mageom.domain.impl.ExtendableImpl
gov.nih.nci.mageom.domain.BioAssayData.impl.BioDataValuesImpl
gov.nih.nci.mageom.domain.BioAssayData.impl.BioDataCubeImpl
public class BioDataCubeImpl
A three-dimensional cube representation of the data.
| Field Summary | |
|---|---|
protected static java.util.ArrayList |
allAssociationMethods
|
protected static java.util.Hashtable |
associationMethods
|
protected java.lang.Object[][][] |
cube
Three dimension array, indexed by the three dimensions to provide the data for the |
protected java.lang.String |
order
The order to expect the dimension. |
| Fields inherited from class gov.nih.nci.mageom.domain.impl.ExtendableImpl |
|---|
propertySets, propertySetsCount, securedElementId |
| Constructor Summary | |
|---|---|
BioDataCubeImpl()
Default constructor |
|
| Method Summary | |
|---|---|
java.lang.Object[][][] |
getCube()
Returns the value of this BioDataCube object's cube attribute. |
java.lang.String |
getOrder()
Returns the value of this BioDataCube object's order attribute. |
java.lang.String |
getSourceType()
|
java.util.Hashtable |
getXMLMethodDescriptors()
Returns a Hashtable containing XMLMethodDescriptors descriptors of
the association methods of this object. |
protected void |
init()
|
BioDataCube[] |
searchBioDataCubes(BioDataCubeSearchCriteria criteria)
Returns an array of BioDataCube objects that
satisfy the given BioDataCubeSearchCriteria. |
void |
setCube(java.lang.Object[][][] p_cube)
Sets the cube attribute. |
void |
setOrder(java.lang.String p_order)
Sets the order attribute. |
void |
setSourceType(java.lang.String sourceType)
|
java.lang.String |
toString()
Returns a String representation of this object suitable for console display. |
org.w3c.dom.Element |
toXML(org.w3c.dom.Document doc)
|
org.w3c.dom.Element |
toXMLDoc(org.w3c.dom.Document doc)
|
org.w3c.dom.Element |
toXMLProcessor(org.w3c.dom.Document doc,
java.util.ArrayList fillOutValues)
Returns an XML representation of the object. |
| Methods inherited from class gov.nih.nci.mageom.domain.BioAssayData.impl.BioDataValuesImpl |
|---|
searchBioDataValueses |
| Methods inherited from class gov.nih.nci.mageom.domain.impl.ExtendableImpl |
|---|
getPropertySets, getPropertySetsCount, getSecuredElementId, searchExtendables, setPropertySets, setSecuredElementId |
| Methods inherited from class gov.nih.nci.mageom.domain.impl.MAGEOMObject |
|---|
getId, getIsEditable, setId |
| Methods inherited from class java.lang.Object |
|---|
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
| Methods inherited from interface gov.nih.nci.mageom.domain.Extendable |
|---|
getPropertySets, setPropertySets |
| Field Detail |
|---|
protected static java.util.ArrayList allAssociationMethods
protected static java.util.Hashtable associationMethods
protected java.lang.Object[][][] cube
protected java.lang.String order
| Constructor Detail |
|---|
public BioDataCubeImpl()
| Method Detail |
|---|
protected void init()
init in class BioDataValuesImpl
public BioDataCube[] searchBioDataCubes(BioDataCubeSearchCriteria criteria)
throws gov.nih.nci.common.search.SearchException
BioDataCube objects that
satisfy the given BioDataCubeSearchCriteria.
criteria - The BioDataCubeSearchCriteria
which represents a query for BioDataCube objects.
BioDataCube objects.
A - gov.nih.nci.common.search.SearchException if there is a problem searching.
gov.nih.nci.common.search.SearchExceptionpublic void setCube(java.lang.Object[][][] p_cube)
BioDataCube object.
p_cube - The new value for cube.BioDataCube.getCube()public java.lang.Object[][][] getCube()
BioDataCubeBioDataCube object's cube attribute.
Description of cube:
Three dimension array, indexed by the three dimensions to provide the data for the BioAssayData.
getCube in interface BioDataCubeany[][][] The value of cube.BioDataCube.getCube()public void setOrder(java.lang.String p_order)
BioDataCube object.
p_order - The new value for order.BioDataCube.getOrder()public java.lang.String getOrder()
BioDataCubeBioDataCube object's order attribute.
Description of order:
The order to expect the dimension. The enumeration uses the first letter of the three dimensions
to represent the six possible orderings.
getOrder in interface BioDataCubeenum {BDQ,BQD,DBQ,DQB,QBD,QDB} The value of order.BioDataCube.getOrder()public org.w3c.dom.Element toXML(org.w3c.dom.Document doc)
toXML in class BioDataValuesImplpublic org.w3c.dom.Element toXMLDoc(org.w3c.dom.Document doc)
toXMLDoc in class BioDataValuesImpl
public org.w3c.dom.Element toXMLProcessor(org.w3c.dom.Document doc,
java.util.ArrayList fillOutValues)
toXMLProcessor in class BioDataValuesImpldoc - the working documentfillOutValues - a list of attribute names that should have
full XML for their values.
public java.util.Hashtable getXMLMethodDescriptors()
XMLMethodDescriptors descriptors of
the association methods of this object.
getXMLMethodDescriptors in class BioDataValuesImplpublic java.lang.String toString()
toString in class BioDataValuesImplpublic java.lang.String getSourceType()
public void setSourceType(java.lang.String sourceType)
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