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java.lang.Objectgov.nih.nci.mageom.domain.impl.MAGEOMObject
gov.nih.nci.mageom.domain.impl.ExtendableImpl
gov.nih.nci.mageom.domain.impl.DescribableImpl
gov.nih.nci.mageom.domain.impl.IdentifiableImpl
gov.nih.nci.mageom.domain.Experiment.impl.ExperimentalFactorImpl
public class ExperimentalFactorImpl
ExperimentFactors are the dependent variables of an experiment (e.g. time, glucose concentration, ...).
| Field Summary | |
|---|---|
protected static java.util.ArrayList |
allAssociationMethods
|
protected OntologyEntry[] |
annotations
DOCUMENT ME |
protected int |
annotationsCount
The count of OntologyEntry objects. |
protected static java.util.Hashtable |
associationMethods
|
protected OntologyEntry |
category
DOCUMENT ME |
protected java.lang.Long |
categoryId
The internal ID of the associated category object. |
protected FactorValue[] |
factorValues
DOCUMENT ME |
protected int |
factorValuesCount
The count of FactorValue objects. |
| Fields inherited from class gov.nih.nci.mageom.domain.impl.IdentifiableImpl |
|---|
identifier, name |
| Fields inherited from class gov.nih.nci.mageom.domain.impl.DescribableImpl |
|---|
auditTrail, auditTrailCount, descriptions, descriptionsCount, security, securityId |
| Fields inherited from class gov.nih.nci.mageom.domain.impl.ExtendableImpl |
|---|
propertySets, propertySetsCount, securedElementId |
| Constructor Summary | |
|---|---|
ExperimentalFactorImpl()
Default constructor |
|
| Method Summary | |
|---|---|
OntologyEntry[] |
getAnnotations()
Returns the value of this ExperimentalFactor object's annotations attribute. |
int |
getAnnotationsCount()
Returns the count of all OntologyEntry
associated with this ExperimentalFactor object. |
OntologyEntry |
getCategory()
Returns the value of this ExperimentalFactor object's category attribute. |
FactorValue[] |
getFactorValues()
Returns the value of this ExperimentalFactor object's factorValues attribute. |
int |
getFactorValuesCount()
Returns the count of all FactorValue
associated with this ExperimentalFactor object. |
java.util.Hashtable |
getXMLMethodDescriptors()
Returns a Hashtable containing XMLMethodDescriptors descriptors of
the association methods of this object. |
protected void |
init()
|
ExperimentalFactor[] |
searchExperimentalFactors(ExperimentalFactorSearchCriteria criteria)
Returns an array of ExperimentalFactor objects that
satisfy the given ExperimentalFactorSearchCriteria. |
void |
setAnnotations(OntologyEntry[] p_annotations)
Sets the annotations attribute. |
void |
setCategory(OntologyEntry p_category)
Sets the category attribute. |
void |
setFactorValues(FactorValue[] p_factorValues)
Sets the factorValues attribute. |
java.lang.String |
toString()
Returns a String representation of this object suitable for console display. |
org.w3c.dom.Element |
toXML(org.w3c.dom.Document doc)
|
org.w3c.dom.Element |
toXMLDoc(org.w3c.dom.Document doc)
|
org.w3c.dom.Element |
toXMLProcessor(org.w3c.dom.Document doc,
java.util.ArrayList fillOutValues)
Returns an XML representation of the object. |
| Methods inherited from class gov.nih.nci.mageom.domain.impl.IdentifiableImpl |
|---|
getIdentifier, getName, searchIdentifiables, setIdentifier, setName |
| Methods inherited from class gov.nih.nci.mageom.domain.impl.DescribableImpl |
|---|
getAuditTrail, getAuditTrailCount, getDescriptions, getDescriptionsCount, getSecurity, searchDescribables, setAuditTrail, setDescriptions, setSecurity |
| Methods inherited from class gov.nih.nci.mageom.domain.impl.ExtendableImpl |
|---|
getPropertySets, getPropertySetsCount, getSecuredElementId, searchExtendables, setPropertySets, setSecuredElementId |
| Methods inherited from class gov.nih.nci.mageom.domain.impl.MAGEOMObject |
|---|
getId, getIsEditable, setId |
| Methods inherited from class java.lang.Object |
|---|
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
| Methods inherited from interface gov.nih.nci.mageom.domain.Identifiable |
|---|
getIdentifier, getName, setIdentifier, setName |
| Methods inherited from interface gov.nih.nci.mageom.domain.Describable |
|---|
getAuditTrail, getDescriptions, getSecurity, setAuditTrail, setDescriptions, setSecurity |
| Methods inherited from interface gov.nih.nci.mageom.domain.Extendable |
|---|
getPropertySets, setPropertySets |
| Field Detail |
|---|
protected static java.util.ArrayList allAssociationMethods
protected static java.util.Hashtable associationMethods
protected int factorValuesCount
protected FactorValue[] factorValues
protected OntologyEntry category
protected java.lang.Long categoryId
protected int annotationsCount
protected OntologyEntry[] annotations
| Constructor Detail |
|---|
public ExperimentalFactorImpl()
| Method Detail |
|---|
protected void init()
init in class IdentifiableImpl
public ExperimentalFactor[] searchExperimentalFactors(ExperimentalFactorSearchCriteria criteria)
throws gov.nih.nci.common.search.SearchException
ExperimentalFactor objects that
satisfy the given ExperimentalFactorSearchCriteria.
criteria - The ExperimentalFactorSearchCriteria
which represents a query for ExperimentalFactor objects.
ExperimentalFactor objects.
A - gov.nih.nci.common.search.SearchException if there is a problem searching.
gov.nih.nci.common.search.SearchExceptionpublic void setFactorValues(FactorValue[] p_factorValues)
ExperimentalFactor object.
setFactorValues in interface ExperimentalFactorp_factorValues - The new value for factorValues.ExperimentalFactor.getFactorValues()public FactorValue[] getFactorValues()
ExperimentalFactorExperimentalFactor object's factorValues attribute.
getFactorValues in interface ExperimentalFactorgov.nih.nci.mageom.bean.Experiment.FactorValue[] The value of factorValues.ExperimentalFactor.getFactorValues()public void setCategory(OntologyEntry p_category)
ExperimentalFactor object.
setCategory in interface ExperimentalFactorp_category - The new value for category.ExperimentalFactor.getCategory()public OntologyEntry getCategory()
ExperimentalFactorExperimentalFactor object's category attribute.
getCategory in interface ExperimentalFactorgov.nih.nci.mageom.bean.Description.OntologyEntry The value of category.ExperimentalFactor.getCategory()public void setAnnotations(OntologyEntry[] p_annotations)
ExperimentalFactor object.
setAnnotations in interface ExperimentalFactorp_annotations - The new value for annotations.ExperimentalFactor.getAnnotations()public OntologyEntry[] getAnnotations()
ExperimentalFactorExperimentalFactor object's annotations attribute.
getAnnotations in interface ExperimentalFactorgov.nih.nci.mageom.bean.Description.OntologyEntry[] The value of annotations.ExperimentalFactor.getAnnotations()public int getFactorValuesCount()
FactorValue
associated with this ExperimentalFactor object.
ExperimentalFactor.getFactorValues()public int getAnnotationsCount()
OntologyEntry
associated with this ExperimentalFactor object.
ExperimentalFactor.getAnnotations()public org.w3c.dom.Element toXML(org.w3c.dom.Document doc)
toXML in class IdentifiableImplpublic org.w3c.dom.Element toXMLDoc(org.w3c.dom.Document doc)
toXMLDoc in class IdentifiableImpl
public org.w3c.dom.Element toXMLProcessor(org.w3c.dom.Document doc,
java.util.ArrayList fillOutValues)
toXMLProcessor in class IdentifiableImpldoc - the working documentfillOutValues - a list of attribute names that should have
full XML for their values.
public java.util.Hashtable getXMLMethodDescriptors()
XMLMethodDescriptors descriptors of
the association methods of this object.
getXMLMethodDescriptors in class IdentifiableImplpublic java.lang.String toString()
toString in class IdentifiableImpl
|
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