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| Packages that use BioSequence | |
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| gov.nih.nci.mageom.domain.BioSequence.impl | |
| gov.nih.nci.mageom.domain.DesignElement | |
| gov.nih.nci.mageom.domain.DesignElement.impl | |
| Uses of BioSequence in gov.nih.nci.mageom.domain.BioSequence.impl |
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| Classes in gov.nih.nci.mageom.domain.BioSequence.impl that implement BioSequence | |
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class |
BioSequenceImpl
A BioSequence is a representation of a DNA, RNA, or protein sequence. |
| Methods in gov.nih.nci.mageom.domain.BioSequence.impl that return BioSequence | |
|---|---|
BioSequence[] |
BioSequenceImpl.searchBioSequences(BioSequenceSearchCriteria criteria)
Returns an array of BioSequence objects that
satisfy the given BioSequenceSearchCriteria. |
| Uses of BioSequence in gov.nih.nci.mageom.domain.DesignElement |
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| Methods in gov.nih.nci.mageom.domain.DesignElement that return BioSequence | |
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BioSequence[] |
CompositeSequence.getBiologicalCharacteristics()
Returns the value of this CompositeSequence object's biologicalCharacteristics attribute. |
BioSequence[] |
Reporter.getImmobilizedCharacteristics()
Returns the value of this Reporter object's immobilizedCharacteristics attribute. |
| Methods in gov.nih.nci.mageom.domain.DesignElement with parameters of type BioSequence | |
|---|---|
void |
CompositeSequence.setBiologicalCharacteristics(BioSequence[] p_biologicalCharacteristics)
Sets the biologicalCharacteristics attribute. |
void |
Reporter.setImmobilizedCharacteristics(BioSequence[] p_immobilizedCharacteristics)
Sets the immobilizedCharacteristics attribute. |
| Uses of BioSequence in gov.nih.nci.mageom.domain.DesignElement.impl |
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| Fields in gov.nih.nci.mageom.domain.DesignElement.impl declared as BioSequence | |
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protected BioSequence[] |
CompositeSequenceImpl.biologicalCharacteristics
DOCUMENT ME |
protected BioSequence[] |
ReporterImpl.immobilizedCharacteristics
DOCUMENT ME |
| Methods in gov.nih.nci.mageom.domain.DesignElement.impl that return BioSequence | |
|---|---|
BioSequence[] |
CompositeSequenceImpl.getBiologicalCharacteristics()
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BioSequence[] |
ReporterImpl.getImmobilizedCharacteristics()
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| Methods in gov.nih.nci.mageom.domain.DesignElement.impl with parameters of type BioSequence | |
|---|---|
void |
CompositeSequenceImpl.setBiologicalCharacteristics(BioSequence[] p_biologicalCharacteristics)
Sets the biologicalCharacteristics attribute. |
void |
ReporterImpl.setImmobilizedCharacteristics(BioSequence[] p_immobilizedCharacteristics)
Sets the immobilizedCharacteristics attribute. |
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