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| Uses of BioEvent in gov.nih.nci.mageom.domain.BioAssay |
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| Subinterfaces of BioEvent in gov.nih.nci.mageom.domain.BioAssay | |
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interface |
BioAssayCreation
The process by which an array and one or more biomaterials are combined to create a bioAssayCreation. |
interface |
BioAssayTreatment
The event which records the process by which PhysicalBioAssays are processed (typically washing, blocking, etc...). |
interface |
FeatureExtraction
The process by which data is extracted from an image producing a measuredBioAssayData and a measuredBioAssay. |
interface |
Hybridization
The archetypal bioAssayCreation event, whereby biomaterials are hybridized to an array. |
interface |
ImageAcquisition
The process by which an image is generated (typically scanning). |
| Uses of BioEvent in gov.nih.nci.mageom.domain.BioAssay.impl |
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| Classes in gov.nih.nci.mageom.domain.BioAssay.impl that implement BioEvent | |
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class |
BioAssayCreationImpl
The process by which an array and one or more biomaterials are combined to create a bioAssayCreation. |
class |
BioAssayTreatmentImpl
The event which records the process by which PhysicalBioAssays are processed (typically washing, blocking, etc...). |
class |
FeatureExtractionImpl
The process by which data is extracted from an image producing a measuredBioAssayData and a measuredBioAssay. |
class |
HybridizationImpl
The archetypal bioAssayCreation event, whereby biomaterials are hybridized to an array. |
class |
ImageAcquisitionImpl
The process by which an image is generated (typically scanning). |
| Uses of BioEvent in gov.nih.nci.mageom.domain.BioAssayData |
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| Subinterfaces of BioEvent in gov.nih.nci.mageom.domain.BioAssayData | |
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interface |
BioAssayMap
The BioAssayMap is the description of how source MeasuredBioAssays and/or DerivedBioAssays are manipulated (mathematically) to produce DerivedBioAssays. |
interface |
DesignElementMap
A DesignElementMap is the description of how source DesignElements are transformed into a target DesignElement. |
interface |
QuantitationTypeMap
A QuantitationTypeMap is the description of how source QuantitationTypes are mathematically transformed into a target QuantitationType. |
interface |
Transformation
The process by which derivedBioAssays are created from measuredBioAssays and/or derivedBioAssays. |
| Uses of BioEvent in gov.nih.nci.mageom.domain.BioAssayData.impl |
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| Classes in gov.nih.nci.mageom.domain.BioAssayData.impl that implement BioEvent | |
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class |
BioAssayMapImpl
The BioAssayMap is the description of how source MeasuredBioAssays and/or DerivedBioAssays are manipulated (mathematically) to produce DerivedBioAssays. |
class |
DesignElementMapImpl
A DesignElementMap is the description of how source DesignElements are transformed into a target DesignElement. |
class |
QuantitationTypeMapImpl
A QuantitationTypeMap is the description of how source QuantitationTypes are mathematically transformed into a target QuantitationType. |
class |
TransformationImpl
The process by which derivedBioAssays are created from measuredBioAssays and/or derivedBioAssays. |
| Uses of BioEvent in gov.nih.nci.mageom.domain.BioEvent |
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| Subinterfaces of BioEvent in gov.nih.nci.mageom.domain.BioEvent | |
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interface |
Map
A Map is the description of how sources are transformed into a target. |
| Uses of BioEvent in gov.nih.nci.mageom.domain.BioEvent.impl |
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| Classes in gov.nih.nci.mageom.domain.BioEvent.impl that implement BioEvent | |
|---|---|
class |
BioEventImpl
An abstract class to capture the concept of an event (either in the laboratory or a computational analysis). |
class |
MapImpl
A Map is the description of how sources are transformed into a target. |
| Methods in gov.nih.nci.mageom.domain.BioEvent.impl that return BioEvent | |
|---|---|
BioEvent[] |
BioEventImpl.searchBioEvents(BioEventSearchCriteria criteria)
Returns an array of BioEvent objects that
satisfy the given BioEventSearchCriteria. |
| Uses of BioEvent in gov.nih.nci.mageom.domain.BioMaterial |
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| Subinterfaces of BioEvent in gov.nih.nci.mageom.domain.BioMaterial | |
|---|---|
interface |
Treatment
The process by which a biomaterial is created (from source biomaterials). |
| Uses of BioEvent in gov.nih.nci.mageom.domain.BioMaterial.impl |
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| Classes in gov.nih.nci.mageom.domain.BioMaterial.impl that implement BioEvent | |
|---|---|
class |
TreatmentImpl
The process by which a biomaterial is created (from source biomaterials). |
| Uses of BioEvent in gov.nih.nci.mageom.domain.DesignElement |
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| Subinterfaces of BioEvent in gov.nih.nci.mageom.domain.DesignElement | |
|---|---|
interface |
CompositeCompositeMap
A CompositeCompositeMap is the description of how source CompositeSequences are transformed into a target CompositeSequence. |
interface |
FeatureReporterMap
A FeatureReporterMap is the description of how source features are transformed into a target reporter. |
interface |
ReporterCompositeMap
A ReporterCompositeMap is the description of how source Reporters are transformed into a target CompositeSequences. |
| Uses of BioEvent in gov.nih.nci.mageom.domain.DesignElement.impl |
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| Classes in gov.nih.nci.mageom.domain.DesignElement.impl that implement BioEvent | |
|---|---|
class |
CompositeCompositeMapImpl
A CompositeCompositeMap is the description of how source CompositeSequences are transformed into a target CompositeSequence. |
class |
FeatureReporterMapImpl
A FeatureReporterMap is the description of how source features are transformed into a target reporter. |
class |
ReporterCompositeMapImpl
A ReporterCompositeMap is the description of how source Reporters are transformed into a target CompositeSequences. |
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