Uses of Interface
gov.nih.nci.mageom.domain.BioSequence.BioSequence

Packages that use BioSequence
gov.nih.nci.mageom.domain.BioSequence.impl   
gov.nih.nci.mageom.domain.DesignElement   
gov.nih.nci.mageom.domain.DesignElement.impl   
 

Uses of BioSequence in gov.nih.nci.mageom.domain.BioSequence.impl
 

Classes in gov.nih.nci.mageom.domain.BioSequence.impl that implement BioSequence
 class BioSequenceImpl
          A BioSequence is a representation of a DNA, RNA, or protein sequence.
 

Methods in gov.nih.nci.mageom.domain.BioSequence.impl that return BioSequence
 BioSequence[] BioSequenceImpl.searchBioSequences(BioSequenceSearchCriteria criteria)
          Returns an array of BioSequence objects that satisfy the given BioSequenceSearchCriteria.
 

Uses of BioSequence in gov.nih.nci.mageom.domain.DesignElement
 

Methods in gov.nih.nci.mageom.domain.DesignElement that return BioSequence
 BioSequence[] CompositeSequence.getBiologicalCharacteristics()
          Returns the value of this CompositeSequence object's biologicalCharacteristics attribute.
 BioSequence[] Reporter.getImmobilizedCharacteristics()
          Returns the value of this Reporter object's immobilizedCharacteristics attribute.
 

Methods in gov.nih.nci.mageom.domain.DesignElement with parameters of type BioSequence
 void CompositeSequence.setBiologicalCharacteristics(BioSequence[] p_biologicalCharacteristics)
          Sets the biologicalCharacteristics attribute.
 void Reporter.setImmobilizedCharacteristics(BioSequence[] p_immobilizedCharacteristics)
          Sets the immobilizedCharacteristics attribute.
 

Uses of BioSequence in gov.nih.nci.mageom.domain.DesignElement.impl
 

Fields in gov.nih.nci.mageom.domain.DesignElement.impl declared as BioSequence
protected  BioSequence[] CompositeSequenceImpl.biologicalCharacteristics
          DOCUMENT ME
protected  BioSequence[] ReporterImpl.immobilizedCharacteristics
          DOCUMENT ME
 

Methods in gov.nih.nci.mageom.domain.DesignElement.impl that return BioSequence
 BioSequence[] CompositeSequenceImpl.getBiologicalCharacteristics()
           
 BioSequence[] ReporterImpl.getImmobilizedCharacteristics()
           
 

Methods in gov.nih.nci.mageom.domain.DesignElement.impl with parameters of type BioSequence
 void CompositeSequenceImpl.setBiologicalCharacteristics(BioSequence[] p_biologicalCharacteristics)
          Sets the biologicalCharacteristics attribute.
 void ReporterImpl.setImmobilizedCharacteristics(BioSequence[] p_immobilizedCharacteristics)
          Sets the immobilizedCharacteristics attribute.