gov.nih.nci.mageom.domain.BioAssayData.impl
Class QuantitationTypeMapImpl

java.lang.Object
  extended by gov.nih.nci.mageom.domain.impl.MAGEOMObject
      extended by gov.nih.nci.mageom.domain.impl.ExtendableImpl
          extended by gov.nih.nci.mageom.domain.impl.DescribableImpl
              extended by gov.nih.nci.mageom.domain.impl.IdentifiableImpl
                  extended by gov.nih.nci.mageom.domain.BioEvent.impl.BioEventImpl
                      extended by gov.nih.nci.mageom.domain.BioEvent.impl.MapImpl
                          extended by gov.nih.nci.mageom.domain.BioAssayData.impl.QuantitationTypeMapImpl
All Implemented Interfaces:
QuantitationTypeMap, BioEvent, Map, Describable, Extendable, Identifiable, java.io.Serializable

public class QuantitationTypeMapImpl
extends MapImpl
implements QuantitationTypeMap

A QuantitationTypeMap is the description of how source QuantitationTypes are mathematically transformed into a target QuantitationType.

Version:
%I%, %G%
See Also:
Serialized Form

Field Summary
protected static java.util.ArrayList allAssociationMethods
           
protected static java.util.Hashtable associationMethods
           
protected  QuantitationType[] sourcesQuantitationType
          DOCUMENT ME
protected  int sourcesQuantitationTypeCount
          The count of QuantitationType objects.
protected  QuantitationType targetQuantitationType
          DOCUMENT ME
protected  java.lang.Long targetQuantitationTypeId
          The internal ID of the associated targetQuantitationType object.
 
Fields inherited from class gov.nih.nci.mageom.domain.BioEvent.impl.BioEventImpl
protocolApplications, protocolApplicationsCount
 
Fields inherited from class gov.nih.nci.mageom.domain.impl.IdentifiableImpl
identifier, name
 
Fields inherited from class gov.nih.nci.mageom.domain.impl.DescribableImpl
auditTrail, auditTrailCount, descriptions, descriptionsCount, security, securityId
 
Fields inherited from class gov.nih.nci.mageom.domain.impl.ExtendableImpl
propertySets, propertySetsCount, securedElementId
 
Constructor Summary
QuantitationTypeMapImpl()
          Default constructor
 
Method Summary
 QuantitationType[] getSourcesQuantitationType()
          Returns the value of this QuantitationTypeMap object's sourcesQuantitationType attribute.
 int getSourcesQuantitationTypeCount()
          Returns the count of all QuantitationType associated with this QuantitationTypeMap object.
 QuantitationType getTargetQuantitationType()
          Returns the value of this QuantitationTypeMap object's targetQuantitationType attribute.
 java.util.Hashtable getXMLMethodDescriptors()
          Returns a Hashtable containing XMLMethodDescriptors descriptors of the association methods of this object.
protected  void init()
           
 QuantitationTypeMap[] searchQuantitationTypeMaps(QuantitationTypeMapSearchCriteria criteria)
          Returns an array of QuantitationTypeMap objects that satisfy the given QuantitationTypeMapSearchCriteria.
 void setSourcesQuantitationType(QuantitationType[] p_sourcesQuantitationType)
          Sets the sourcesQuantitationType attribute.
 void setTargetQuantitationType(QuantitationType p_targetQuantitationType)
          Sets the targetQuantitationType attribute.
 java.lang.String toString()
          Returns a String representation of this object suitable for console display.
 org.w3c.dom.Element toXML(org.w3c.dom.Document doc)
           
 org.w3c.dom.Element toXMLDoc(org.w3c.dom.Document doc)
           
 org.w3c.dom.Element toXMLProcessor(org.w3c.dom.Document doc, java.util.ArrayList fillOutValues)
          Returns an XML representation of the object.
 
Methods inherited from class gov.nih.nci.mageom.domain.BioEvent.impl.MapImpl
searchMaps
 
Methods inherited from class gov.nih.nci.mageom.domain.BioEvent.impl.BioEventImpl
getProtocolApplications, getProtocolApplicationsCount, searchBioEvents, setProtocolApplications
 
Methods inherited from class gov.nih.nci.mageom.domain.impl.IdentifiableImpl
getIdentifier, getName, searchIdentifiables, setIdentifier, setName
 
Methods inherited from class gov.nih.nci.mageom.domain.impl.DescribableImpl
getAuditTrail, getAuditTrailCount, getDescriptions, getDescriptionsCount, getSecurity, searchDescribables, setAuditTrail, setDescriptions, setSecurity
 
Methods inherited from class gov.nih.nci.mageom.domain.impl.ExtendableImpl
getPropertySets, getPropertySetsCount, getSecuredElementId, searchExtendables, setPropertySets, setSecuredElementId
 
Methods inherited from class gov.nih.nci.mageom.domain.impl.MAGEOMObject
getId, getIsEditable, setId
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
 
Methods inherited from interface gov.nih.nci.mageom.domain.BioEvent.BioEvent
getProtocolApplications, setProtocolApplications
 
Methods inherited from interface gov.nih.nci.mageom.domain.Identifiable
getIdentifier, getName, setIdentifier, setName
 
Methods inherited from interface gov.nih.nci.mageom.domain.Describable
getAuditTrail, getDescriptions, getSecurity, setAuditTrail, setDescriptions, setSecurity
 
Methods inherited from interface gov.nih.nci.mageom.domain.Extendable
getPropertySets, setPropertySets
 

Field Detail

allAssociationMethods

protected static java.util.ArrayList allAssociationMethods

associationMethods

protected static java.util.Hashtable associationMethods

targetQuantitationType

protected QuantitationType targetQuantitationType
DOCUMENT ME


targetQuantitationTypeId

protected java.lang.Long targetQuantitationTypeId
The internal ID of the associated targetQuantitationType object.


sourcesQuantitationTypeCount

protected int sourcesQuantitationTypeCount
The count of QuantitationType objects.


sourcesQuantitationType

protected QuantitationType[] sourcesQuantitationType
DOCUMENT ME

Constructor Detail

QuantitationTypeMapImpl

public QuantitationTypeMapImpl()
Default constructor

Method Detail

init

protected void init()
Overrides:
init in class MapImpl

searchQuantitationTypeMaps

public QuantitationTypeMap[] searchQuantitationTypeMaps(QuantitationTypeMapSearchCriteria criteria)
                                                 throws gov.nih.nci.common.search.SearchException
Returns an array of QuantitationTypeMap objects that satisfy the given QuantitationTypeMapSearchCriteria.

Parameters:
criteria - The QuantitationTypeMapSearchCriteria which represents a query for QuantitationTypeMap objects.
Returns:
An array of QuantitationTypeMap objects.
Throws:
A - gov.nih.nci.common.search.SearchException if there is a problem searching.
gov.nih.nci.common.search.SearchException

setTargetQuantitationType

public void setTargetQuantitationType(QuantitationType p_targetQuantitationType)
Sets the targetQuantitationType attribute. This API is currently read-only. So, calling this method does not affect the persistent state of a QuantitationTypeMap object.

Specified by:
setTargetQuantitationType in interface QuantitationTypeMap
Parameters:
p_targetQuantitationType - The new value for targetQuantitationType.
See Also:
QuantitationTypeMap.getTargetQuantitationType()

getTargetQuantitationType

public QuantitationType getTargetQuantitationType()
Description copied from interface: QuantitationTypeMap
Returns the value of this QuantitationTypeMap object's targetQuantitationType attribute.

Specified by:
getTargetQuantitationType in interface QuantitationTypeMap
Returns:
gov.nih.nci.mageom.bean.QuantitationType.QuantitationType The value of targetQuantitationType.
See Also:
QuantitationTypeMap.getTargetQuantitationType()

setSourcesQuantitationType

public void setSourcesQuantitationType(QuantitationType[] p_sourcesQuantitationType)
Sets the sourcesQuantitationType attribute. This API is currently read-only. So, calling this method does not affect the persistent state of a QuantitationTypeMap object.

Specified by:
setSourcesQuantitationType in interface QuantitationTypeMap
Parameters:
p_sourcesQuantitationType - The new value for sourcesQuantitationType.
See Also:
QuantitationTypeMap.getSourcesQuantitationType()

getSourcesQuantitationType

public QuantitationType[] getSourcesQuantitationType()
Description copied from interface: QuantitationTypeMap
Returns the value of this QuantitationTypeMap object's sourcesQuantitationType attribute.

Specified by:
getSourcesQuantitationType in interface QuantitationTypeMap
Returns:
gov.nih.nci.mageom.bean.QuantitationType.QuantitationType[] The value of sourcesQuantitationType.
See Also:
QuantitationTypeMap.getSourcesQuantitationType()

getSourcesQuantitationTypeCount

public int getSourcesQuantitationTypeCount()
Returns the count of all QuantitationType associated with this QuantitationTypeMap object.

Returns:
the count
See Also:
QuantitationTypeMap.getSourcesQuantitationType()

toXML

public org.w3c.dom.Element toXML(org.w3c.dom.Document doc)
Overrides:
toXML in class MapImpl

toXMLDoc

public org.w3c.dom.Element toXMLDoc(org.w3c.dom.Document doc)
Overrides:
toXMLDoc in class MapImpl

toXMLProcessor

public org.w3c.dom.Element toXMLProcessor(org.w3c.dom.Document doc,
                                          java.util.ArrayList fillOutValues)
Returns an XML representation of the object. The document is not modified.

Overrides:
toXMLProcessor in class MapImpl
Parameters:
doc - the working document
fillOutValues - a list of attribute names that should have full XML for their values.
Returns:
org.w3c.dom.Element an XML representation

getXMLMethodDescriptors

public java.util.Hashtable getXMLMethodDescriptors()
Returns a Hashtable containing XMLMethodDescriptors descriptors of the association methods of this object.

Overrides:
getXMLMethodDescriptors in class MapImpl
Returns:
Hashtable The Hashtable of descriptors.

toString

public java.lang.String toString()
Returns a String representation of this object suitable for console display.

Overrides:
toString in class MapImpl
Returns:
the String representation.