Uses of Package
gov.nih.nci.mageom.domain.DesignElement

Packages that use gov.nih.nci.mageom.domain.DesignElement
gov.nih.nci.mageom.domain.Array   
gov.nih.nci.mageom.domain.Array.impl   
gov.nih.nci.mageom.domain.ArrayDesign   
gov.nih.nci.mageom.domain.ArrayDesign.impl   
gov.nih.nci.mageom.domain.BioAssayData   
gov.nih.nci.mageom.domain.BioAssayData.impl   
gov.nih.nci.mageom.domain.DesignElement   
gov.nih.nci.mageom.domain.DesignElement.impl   
 

Classes in gov.nih.nci.mageom.domain.DesignElement used by gov.nih.nci.mageom.domain.Array
Feature
          An intended position on an array.
Position
          Specifies a position on an array.
 

Classes in gov.nih.nci.mageom.domain.DesignElement used by gov.nih.nci.mageom.domain.Array.impl
Feature
          An intended position on an array.
Position
          Specifies a position on an array.
 

Classes in gov.nih.nci.mageom.domain.DesignElement used by gov.nih.nci.mageom.domain.ArrayDesign
CompositeSequence
          A collection of Reporter or CompositeSequence Design Elements, annotated through the association to BioSequence.
Feature
          An intended position on an array.
Reporter
          A Design Element that represents some biological material (clone, oligo, etc.) on an array which will report on some biosequence or biosequences.
 

Classes in gov.nih.nci.mageom.domain.DesignElement used by gov.nih.nci.mageom.domain.ArrayDesign.impl
CompositeSequence
          A collection of Reporter or CompositeSequence Design Elements, annotated through the association to BioSequence.
Feature
          An intended position on an array.
Reporter
          A Design Element that represents some biological material (clone, oligo, etc.) on an array which will report on some biosequence or biosequences.
 

Classes in gov.nih.nci.mageom.domain.DesignElement used by gov.nih.nci.mageom.domain.BioAssayData
CompositeSequence
          A collection of Reporter or CompositeSequence Design Elements, annotated through the association to BioSequence.
DesignElement
          An element of an array.
Feature
          An intended position on an array.
Reporter
          A Design Element that represents some biological material (clone, oligo, etc.) on an array which will report on some biosequence or biosequences.
 

Classes in gov.nih.nci.mageom.domain.DesignElement used by gov.nih.nci.mageom.domain.BioAssayData.impl
CompositeSequence
          A collection of Reporter or CompositeSequence Design Elements, annotated through the association to BioSequence.
DesignElement
          An element of an array.
Feature
          An intended position on an array.
Reporter
          A Design Element that represents some biological material (clone, oligo, etc.) on an array which will report on some biosequence or biosequences.
 

Classes in gov.nih.nci.mageom.domain.DesignElement used by gov.nih.nci.mageom.domain.DesignElement
CompositeCompositeMap
          A CompositeCompositeMap is the description of how source CompositeSequences are transformed into a target CompositeSequence.
CompositePosition
          The location in the compositeSequence target's sequence to which a source compositeSequence maps.
CompositeSequence
          A collection of Reporter or CompositeSequence Design Elements, annotated through the association to BioSequence.
DesignElement
          An element of an array.
Feature
          An intended position on an array.
FeatureInformation
          As part of the map information, allows the association of one or more differences in the BioMaterial on a feature from the BioMaterial of the Reporter.
FeatureLocation
          Specifies where a feature is located relative to a grid.
FeatureReporterMap
          A FeatureReporterMap is the description of how source features are transformed into a target reporter.
MismatchInformation
          Describes how a reporter varies from its ReporterCharacteristics sequence(s) or how a Feature varies from its Reporter sequence.
Position
          Specifies a position on an array.
Reporter
          A Design Element that represents some biological material (clone, oligo, etc.) on an array which will report on some biosequence or biosequences.
ReporterCompositeMap
          A ReporterCompositeMap is the description of how source Reporters are transformed into a target CompositeSequences.
ReporterPosition
          The location in the composite target's sequence to which a source reporter maps.
 

Classes in gov.nih.nci.mageom.domain.DesignElement used by gov.nih.nci.mageom.domain.DesignElement.impl
CompositeCompositeMap
          A CompositeCompositeMap is the description of how source CompositeSequences are transformed into a target CompositeSequence.
CompositePosition
          The location in the compositeSequence target's sequence to which a source compositeSequence maps.
CompositeSequence
          A collection of Reporter or CompositeSequence Design Elements, annotated through the association to BioSequence.
DesignElement
          An element of an array.
Feature
          An intended position on an array.
FeatureInformation
          As part of the map information, allows the association of one or more differences in the BioMaterial on a feature from the BioMaterial of the Reporter.
FeatureLocation
          Specifies where a feature is located relative to a grid.
FeatureReporterMap
          A FeatureReporterMap is the description of how source features are transformed into a target reporter.
MismatchInformation
          Describes how a reporter varies from its ReporterCharacteristics sequence(s) or how a Feature varies from its Reporter sequence.
Position
          Specifies a position on an array.
Reporter
          A Design Element that represents some biological material (clone, oligo, etc.) on an array which will report on some biosequence or biosequences.
ReporterCompositeMap
          A ReporterCompositeMap is the description of how source Reporters are transformed into a target CompositeSequences.
ReporterPosition
          The location in the composite target's sequence to which a source reporter maps.