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java.lang.Objectgov.nih.nci.mageom.domain.impl.MAGEOMObject
gov.nih.nci.mageom.domain.impl.ExtendableImpl
gov.nih.nci.mageom.domain.impl.DescribableImpl
gov.nih.nci.mageom.domain.impl.IdentifiableImpl
gov.nih.nci.mageom.domain.BioEvent.impl.BioEventImpl
gov.nih.nci.mageom.domain.BioEvent.impl.MapImpl
gov.nih.nci.mageom.domain.BioAssayData.impl.DesignElementMapImpl
gov.nih.nci.mageom.domain.DesignElement.impl.FeatureReporterMapImpl
public class FeatureReporterMapImpl
A FeatureReporterMap is the description of how source features are transformed into a target reporter. These would map replicate features for a reporter to the reporter.
| Field Summary | |
|---|---|
protected static java.util.ArrayList |
allAssociationMethods
|
protected static java.util.Hashtable |
associationMethods
|
protected FeatureInformation[] |
featureInformationSources
DOCUMENT ME |
protected int |
featureInformationSourcesCount
The count of FeatureInformation objects. |
protected Reporter |
reporter
DOCUMENT ME |
protected java.lang.Long |
reporterId
The internal ID of the associated reporter object. |
| Fields inherited from class gov.nih.nci.mageom.domain.BioEvent.impl.BioEventImpl |
|---|
protocolApplications, protocolApplicationsCount |
| Fields inherited from class gov.nih.nci.mageom.domain.impl.IdentifiableImpl |
|---|
identifier, name |
| Fields inherited from class gov.nih.nci.mageom.domain.impl.DescribableImpl |
|---|
auditTrail, auditTrailCount, descriptions, descriptionsCount, security, securityId |
| Fields inherited from class gov.nih.nci.mageom.domain.impl.ExtendableImpl |
|---|
propertySets, propertySetsCount, securedElementId |
| Constructor Summary | |
|---|---|
FeatureReporterMapImpl()
Default constructor |
|
| Method Summary | |
|---|---|
FeatureInformation[] |
getFeatureInformationSources()
Returns the value of this FeatureReporterMap object's featureInformationSources attribute. |
int |
getFeatureInformationSourcesCount()
Returns the count of all FeatureInformation
associated with this FeatureReporterMap object. |
Reporter |
getReporter()
Returns the value of this FeatureReporterMap object's reporter attribute. |
java.util.Hashtable |
getXMLMethodDescriptors()
Returns a Hashtable containing XMLMethodDescriptors descriptors of
the association methods of this object. |
protected void |
init()
|
FeatureReporterMap[] |
searchFeatureReporterMaps(FeatureReporterMapSearchCriteria criteria)
Returns an array of FeatureReporterMap objects that
satisfy the given FeatureReporterMapSearchCriteria. |
void |
setFeatureInformationSources(FeatureInformation[] p_featureInformationSources)
Sets the featureInformationSources attribute. |
void |
setReporter(Reporter p_reporter)
Sets the reporter attribute. |
java.lang.String |
toString()
Returns a String representation of this object suitable for console display. |
org.w3c.dom.Element |
toXML(org.w3c.dom.Document doc)
|
org.w3c.dom.Element |
toXMLDoc(org.w3c.dom.Document doc)
|
org.w3c.dom.Element |
toXMLProcessor(org.w3c.dom.Document doc,
java.util.ArrayList fillOutValues)
Returns an XML representation of the object. |
| Methods inherited from class gov.nih.nci.mageom.domain.BioAssayData.impl.DesignElementMapImpl |
|---|
searchDesignElementMaps |
| Methods inherited from class gov.nih.nci.mageom.domain.BioEvent.impl.MapImpl |
|---|
searchMaps |
| Methods inherited from class gov.nih.nci.mageom.domain.BioEvent.impl.BioEventImpl |
|---|
getProtocolApplications, getProtocolApplicationsCount, searchBioEvents, setProtocolApplications |
| Methods inherited from class gov.nih.nci.mageom.domain.impl.IdentifiableImpl |
|---|
getIdentifier, getName, searchIdentifiables, setIdentifier, setName |
| Methods inherited from class gov.nih.nci.mageom.domain.impl.DescribableImpl |
|---|
getAuditTrail, getAuditTrailCount, getDescriptions, getDescriptionsCount, getSecurity, searchDescribables, setAuditTrail, setDescriptions, setSecurity |
| Methods inherited from class gov.nih.nci.mageom.domain.impl.ExtendableImpl |
|---|
getPropertySets, getPropertySetsCount, getSecuredElementId, searchExtendables, setPropertySets, setSecuredElementId |
| Methods inherited from class gov.nih.nci.mageom.domain.impl.MAGEOMObject |
|---|
getId, getIsEditable, setId |
| Methods inherited from class java.lang.Object |
|---|
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
| Methods inherited from interface gov.nih.nci.mageom.domain.BioEvent.BioEvent |
|---|
getProtocolApplications, setProtocolApplications |
| Methods inherited from interface gov.nih.nci.mageom.domain.Identifiable |
|---|
getIdentifier, getName, setIdentifier, setName |
| Methods inherited from interface gov.nih.nci.mageom.domain.Describable |
|---|
getAuditTrail, getDescriptions, getSecurity, setAuditTrail, setDescriptions, setSecurity |
| Methods inherited from interface gov.nih.nci.mageom.domain.Extendable |
|---|
getPropertySets, setPropertySets |
| Field Detail |
|---|
protected static java.util.ArrayList allAssociationMethods
protected static java.util.Hashtable associationMethods
protected int featureInformationSourcesCount
protected FeatureInformation[] featureInformationSources
protected Reporter reporter
protected java.lang.Long reporterId
| Constructor Detail |
|---|
public FeatureReporterMapImpl()
| Method Detail |
|---|
protected void init()
init in class DesignElementMapImpl
public FeatureReporterMap[] searchFeatureReporterMaps(FeatureReporterMapSearchCriteria criteria)
throws gov.nih.nci.common.search.SearchException
FeatureReporterMap objects that
satisfy the given FeatureReporterMapSearchCriteria.
criteria - The FeatureReporterMapSearchCriteria
which represents a query for FeatureReporterMap objects.
FeatureReporterMap objects.
A - gov.nih.nci.common.search.SearchException if there is a problem searching.
gov.nih.nci.common.search.SearchExceptionpublic void setFeatureInformationSources(FeatureInformation[] p_featureInformationSources)
FeatureReporterMap object.
setFeatureInformationSources in interface FeatureReporterMapp_featureInformationSources - The new value for featureInformationSources.FeatureReporterMap.getFeatureInformationSources()public FeatureInformation[] getFeatureInformationSources()
FeatureReporterMapFeatureReporterMap object's featureInformationSources attribute.
getFeatureInformationSources in interface FeatureReporterMapgov.nih.nci.mageom.bean.DesignElement.FeatureInformation[] The value of featureInformationSources.FeatureReporterMap.getFeatureInformationSources()public void setReporter(Reporter p_reporter)
FeatureReporterMap object.
setReporter in interface FeatureReporterMapp_reporter - The new value for reporter.FeatureReporterMap.getReporter()public Reporter getReporter()
FeatureReporterMapFeatureReporterMap object's reporter attribute.
getReporter in interface FeatureReporterMapgov.nih.nci.mageom.bean.DesignElement.Reporter The value of reporter.FeatureReporterMap.getReporter()public int getFeatureInformationSourcesCount()
FeatureInformation
associated with this FeatureReporterMap object.
FeatureReporterMap.getFeatureInformationSources()public org.w3c.dom.Element toXML(org.w3c.dom.Document doc)
toXML in class DesignElementMapImplpublic org.w3c.dom.Element toXMLDoc(org.w3c.dom.Document doc)
toXMLDoc in class DesignElementMapImpl
public org.w3c.dom.Element toXMLProcessor(org.w3c.dom.Document doc,
java.util.ArrayList fillOutValues)
toXMLProcessor in class DesignElementMapImpldoc - the working documentfillOutValues - a list of attribute names that should have
full XML for their values.
public java.util.Hashtable getXMLMethodDescriptors()
XMLMethodDescriptors descriptors of
the association methods of this object.
getXMLMethodDescriptors in class DesignElementMapImplpublic java.lang.String toString()
toString in class DesignElementMapImpl
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