NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:261677     UniGene Mm.23692     Mus musculus (mouse)   Csnk2a1 Order cDNA clone, Links
Casein kinase 2, alpha 1 polypeptide (Csnk2a1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001112324.1 PREDICTED: similar to casein kinase II alpha 1 subunit isoform a isoform 3 M. mulatta 99.7 390
NP_808228.1 casein kinase II alpha 1 subunit isoform b H. sapiens 99.2 254
NP_524918.1 Casein kinase II alpha subunit CG17520-PB, isoform B D. melanogaster 93.0 327
NP_001032165.1 CKA1 (CASEIN KINASE ALPHA 1); kinase A. thaliana 79.2 298

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: embryonic tissue; mammary gland; thymus; eye; brain; mixed; intestine; ovary; uncharacterized tissue; bone marrow; extraembryonic tissue; pituitary gland; stomach; fertilized ovum; prostate; liver; inner ear; lymph node; bladder; spinal cord; spleen; testis; kidney; lung; skin; dorsal root ganglion; heart; adipose tissue; pancreas; sympathetic ganglion
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2 G3
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

AK031617.1 Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030461M12 product:casein kinase II, alpha 1 polypeptide, full insert sequence P
AK042898.1 Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730036H11 product:unclassifiable, full insert sequence
BC058604.1 Mus musculus cDNA clone IMAGE:5387585 A
BC060742.1 Mus musculus casein kinase 2, alpha 1 polypeptide, mRNA (cDNA clone MGC:68201 IMAGE:4945773), complete cds PA
BC069919.1 Mus musculus casein kinase 2, alpha 1 polypeptide, mRNA (cDNA clone IMAGE:4240685), partial cds PA
BC089343.1 Mus musculus casein kinase 2, alpha 1 polypeptide, mRNA (cDNA clone MGC:102141 IMAGE:30360017), complete cds PA
AK133980.1 Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730591I10 product:casein kinase II, alpha 1 polypeptide, full insert sequence
AK146032.1 Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:I530025D17 product:casein kinase II, alpha 1 polypeptide, full insert sequence P
AK164037.1 Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430023O12 product:unclassifiable, full insert sequence
AK162515.1 Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530047F24 product:casein kinase II, alpha 1 polypeptide, full insert sequence
AK158077.1 Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930026L10 product:casein kinase II, alpha 1 polypeptide, full insert sequence P
U17112.1 Mus musculus casein kinase II alpha subunit (CKIIA) mRNA, complete cds P
U51866.1 Mus musculus casein kinase II alpha subunit mRNA, complete cds P
NM_007788.3 Mus musculus casein kinase 2, alpha 1 polypeptide (Csnk2a1), mRNA A
AK011501.1 Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610021E14 product:casein kinase II, alpha 1 polypeptide, full insert sequence P
BC026149.1 Mus musculus casein kinase 2, alpha 1 polypeptide, mRNA (cDNA clone MGC:13987 IMAGE:4188101), complete cds PA

EST sequences (10 of 260) [Show all sequences]

BY015187.1 Clone G730049M10 lung 5' read
BY021625.1 Clone G830048I16 mammary gland 5' read
BY025842.1 Clone G930033J07 mammary gland 5' read
BY043381.1 Clone I730028F04 thymus 5' read
BY102660.1 Clone K630147B21 brain 5' read
BY105594.1 Clone K630161I10 mixed 5' read
BY151833.1 Clone L930300A20 embryonic tissue 5' read P
BY232638.1 Clone F930026L10 inner ear 5' read P
BY257468.1 Clone K330030E04 brain 5' read P
BY277710.1 Clone K430328C04 brain 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help