NbLib0013: dbEST human retina - collection 1 unnormalized (hsret01)

Last GRIST date: 09/22/2008

This library includes the following UniGene libs: Lib.302, Lib.303, Lib.432, Lib.433, Lib.552, Lib.690, Lib.10280, Lib.10282, Lib.10283, Lib.10288.
View this library: Full List | Indexed by Chromosomal Position | Indexed by GO Term | Tab Delimited Understanding NEIBank Data
[**] This UniGene associated with another RefSeq or GenBank in this table. Click to display. View All Data | << Previous Page | Next Page >>
Group#Description Entrez Gene IdGenBankUniGene (Build Hs #214) Chromosomal Pos. (BLAT)Chromosome (UniGene)Num. Clones
1
  • Homo sapiens mitochondrial DNA, complete genome, isolate: SCsq0052
    		• 4513
    4535
    4537
    4539
    4541
    		AP010712         192
    2
  • Homo sapiens ribosomal protein L28 (RPL28), mRNA
  • Ribosomal protein L28
    		• 6158
    		NM_000991   652114  
    		   19q13.4 172
    3
  • Homo sapiens rhodopsin (opsin 2, rod pigment) (retinitis pigmentosa 4, autosomal dominant) (RHO), mRNA
  • Rhodopsin
    		• 6010
    		NM_000539   247565  
    		   3q21-q24 159
    4
  • Homo sapiens transferrin (TF), mRNA
  • Transferrin
    		• 7018
    		NM_001063   518267  
    		   3q22.1 151
    5
  • Homo sapiens glutathione peroxidase 3 (plasma) (GPX3), mRNA
  • Glutathione peroxidase 3 (plasma)
    		• 2878
    		NM_002084   386793  
    		   5q23 144
    6
  • Homo sapiens glyceraldehyde-3-phosphate dehydrogenase (GAPDH), mRNA
  • Transcribed locus, strongly similar to NP_002037.2 glyceraldehyde-3-phosphate dehydrogenase [Homo sapiens]
    		• 2597
    		NM_002046   479728  
    		   12p13 130
    7
  • Homo sapiens eukaryotic translation elongation factor 1 alpha 1 (EEF1A1), mRNA
  • Eukaryotic translation elongation factor 1 alpha 1
  • Similar to elongation factor 1 alpha
    		• 1915
    		NM_001402   586423  
    654625  
    		   6q14.1
    1p21.3    		 114
    8
  • Homo sapiens cyclin I (CCNI), mRNA
  • Cyclin I
    		• 10983
    		NM_006835   709250  
    		     102
    9
  • Homo sapiens collagen, type I, alpha 1 (COL1A1), mRNA
  • Collagen, type I, alpha 1
    		• 1277
    		NM_000088   172928  
    		   17q21.33 88
    10
  • Homo sapiens phosphodiesterase 6G, cGMP-specific, rod, gamma (PDE6G), mRNA
  • Phosphodiesterase 6G, cGMP-specific, rod, gamma
    		• 5148
    		NM_002602   654482  
    		   17q25 85
    11
  • Homo sapiens recoverin (RCVRN), mRNA
  • Recoverin
    		• 5957
    		NM_002903   80539  
    		   17p13.1 61
    12
  • Homo sapiens pleckstrin homology domain containing, family B (evectins) member 1 (PLEKHB1), mRNA
  • Pleckstrin homology domain containing, family B (evectins) member 1
    		• 58473
    		NM_021200   445489  
    		   11q13.5-q14.1 52
    13
  • Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 (DDX51), mRNA
  • DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
    		• 317781
    		NM_175066   445168  
    		   12q24.33 48
    14
  • Homo sapiens S-antigen; retina and pineal gland (arrestin) (SAG), mRNA
  • S-antigen; retina and pineal gland (arrestin)
    		• 6295
    		NM_000541   32721  
    		   2q37.1 48
    15
  • Homo sapiens guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 (GNAT1), transcript variant 1, mRNA
  • Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1
    		• 2779
    		NM_144499   517978  
    		   3p21 47
    16
  • Homo sapiens tubulin, alpha 1a (TUBA1A), mRNA
  • Tubulin, alpha 1b
  • Tubulin, alpha 1a
    		• 7846
    		NM_006009   524390  
    654422  
    		   12q13.12
    12q12-q14.3    		 47
    17
  • Homo sapiens aldolase A, fructose-bisphosphate (ALDOA), transcript variant 1, mRNA
  • Aldolase A, fructose-bisphosphate
    		• 226
    		NM_000034   513490  
    		   16q22-q24 46
    18
  • 97% protein similarity to: PREDICTED: similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma) isoform 3 [Canis familiaris]
    		•           46
    19
  • Human cGMP phosphodiesterase alpha subunit (CGPR-A) mRNA, complete cds
  • Phosphodiesterase 6A, cGMP-specific, rod, alpha
    		• 5145
    		M26061   567314  
    		   5q31.2-q34 43
    20
  • Homo sapiens enolase 2 (gamma, neuronal) (ENO2), mRNA
  • Enolase 2 (gamma, neuronal)
    		• 2026
    		NM_001975   511915  
    		   12p13 43
    21
  • Homo sapiens glutamate-ammonia ligase (glutamine synthetase) (GLUL), transcript variant 2, mRNA
  • Glutamate-ammonia ligase (glutamine synthetase)
    		• 2752
    		NM_001033044   518525  
    		   1q31 43
    22
  • Homo sapiens clusterin (CLU), transcript variant 1, mRNA
  • Clusterin
    		• 1191
    		NM_001831   436657  
    		   8p21-p12 40
    23
  • Homo sapiens ferritin, heavy polypeptide 1 (FTH1), mRNA
  • Ferritin, heavy polypeptide 1
  • Bestrophin 1
    		• 2495
    		NM_002032   524910 [**] 
    712676  
    		   11q13
    11q13    		 40
    24
  • Homo sapiens guanylate cyclase activator 1A (retina) (GUCA1A), mRNA
  • Guanylate cyclase activator 1A (retina)
    		• 2978
    		NM_000409   92858  
    		   6p21.1 37
    25
  • Homo sapiens ribosomal protein L23a (RPL23A), mRNA
  • Ribosomal protein L23a
  • Ribosomal protein L23a-like
  • Similar to ribosomal protein L23A
    		• 6147
    		NM_000984   419463  
    655367  
    708100  
    		   17q11
    17q23.2
    17q23.2    		 37
    26
  • Homo sapiens aldolase C, fructose-bisphosphate (ALDOC), mRNA
  • Aldolase C, fructose-bisphosphate
    		• 230
    		NM_005165   155247  
    		   17cen-q12 37
    27
  • Homo sapiens mutS homolog 6 (E. coli) (MSH6), mRNA
  • MutS homolog 6 (E. coli)
    		• 2956
    		NM_000179   445052  
    		   2p16 36
    28
  • Homo sapiens polycomb group ring finger 2 (PCGF2), mRNA
  • Polycomb group ring finger 2
  • CDGSH iron sulfur domain 3
    		• 7703
    		NM_007144   371617  
    713595  
    		   17q12
    17q12    		 36
    29
  • Homo sapiens DNA-damage-inducible transcript 4 (DDIT4), mRNA
  • DNA-damage-inducible transcript 4
    		• 54541
    		NM_019058   523012  
    		   10pter-q26.12 36
    30
  • Homo sapiens amyloid beta (A4) precursor protein (peptidase nexin-II, Alzheimer disease) (APP), transcript variant 1, mRNA
  • Amyloid beta (A4) precursor protein (peptidase nexin-II, Alzheimer disease)
    		• 351
    		NM_000484   434980  
    		   21q21.2|21q21.3 35
    31
  • Homo sapiens heat shock protein 90kDa alpha (cytosolic), class A member 1 (HSP90AA1), transcript variant 1, mRNA
  • Heat shock protein 90kDa alpha (cytosolic), class A member 1
    		• 3320
    		NM_001017963   525600  
    		   14q32.33 34
    32
  • Homo sapiens eukaryotic translation initiation factor 1 (EIF1), mRNA
  • Eukaryotic translation initiation factor 1
    		• 10209
    		NM_005801   150580 [**] 
    		   17q21.2 33
    33
  • Homo sapiens collagen, type I, alpha 2 (COL1A2), mRNA
  • Collagen, type I, alpha 2
    		• 1278
    		NM_000089   489142  
    		   7q22.1 32
    34
  • Homo sapiens pyruvate kinase, muscle (PKM2), transcript variant 1, mRNA
  • Pyruvate kinase, muscle
    		• 5315
    		NM_002654   534770  
    		   15q22 31
    35
  • Homo sapiens adducin 1 (alpha) (ADD1), transcript variant 1, mRNA
  • Adducin 1 (alpha)
    		• 118
    		NM_001119   183706  
    		   4p16.3 31
    36
  • Homo sapiens milk fat globule-EGF factor 8 protein (MFGE8), transcript variant 2, mRNA
  • Milk fat globule-EGF factor 8 protein
    		• 4240
    		NM_001114614   3745  
    		   15q25 30
    37
  • Homo sapiens solute carrier organic anion transporter family, member 4A1 (SLCO4A1), mRNA
  • Solute carrier organic anion transporter family, member 4A1
    		• 28231
    		NM_016354   235782  
    		   20q13.33 28
    38
  • Homo sapiens synuclein, beta (SNCB), transcript variant 1, mRNA
  • ATPase, Na+/K+ transporting, beta 2 polypeptide
  • Synuclein, beta
    		• 6620
    		NM_001001502   712542  
    90297  
    		   5q35 28
    39
  • Homo sapiens DNA-damage-inducible transcript 3 (DDIT3), mRNA
  • DNA-damage-inducible transcript 3
  • Methionyl-tRNA synthetase
    		• 1649
    		NM_004083   505777  
    632707  
    		   12q13.1-q13.2
    12q13.2    		 27
    40
  • Homo sapiens forkhead box O3 (FOXO3), transcript variant 1, mRNA
  • Forkhead box O3
    		• 2309
    		NM_001455   220950  
    		   6q21 27
    41
  • Homo sapiens guanine nucleotide binding protein (G protein), beta polypeptide 1 (GNB1), mRNA
  • Guanine nucleotide binding protein (G protein), beta polypeptide 1
    		• 2782
    		NM_002074   709208  
    		     27
    42
  • Homo sapiens phosphoprotein enriched in astrocytes 15 (PEA15), mRNA
  • Phosphoprotein enriched in astrocytes 15
    		• 8682
    		NM_003768   517216  
    		   1q21.1 27
    43
  • Homo sapiens CD74 molecule, major histocompatibility complex, class II invariant chain (CD74), transcript variant 1, mRNA
  • CD74 molecule, major histocompatibility complex, class II invariant chain
    		• 972
    		NM_001025159   436568  
    		   5q32 26
    44
  • Homo sapiens retinol binding protein 3, interstitial (RBP3), mRNA
  • Retinol binding protein 3, interstitial
    		• 5949
    		NM_002900   591928  
    		   10q11.2 26
    45
  • Homo sapiens heat shock protein 90kDa alpha (cytosolic), class B member 1 (HSP90AB1), mRNA
  • Heat shock protein 90kDa alpha (cytosolic), class B member 1
    		• 3326
    		NM_007355   509736  
    		   6p12 26
    46
  • Homo sapiens ribosomal protein L3 (RPL3), transcript variant 1, mRNA
  • Ribosomal protein L3
    		• 6122
    		NM_000967   119598  
    		   22q13 26
    47
  • Homo sapiens actin, beta (ACTB), mRNA
  • Actin, beta
    		• 60
    		NM_001101   520640  
    		   7p15-p12 26
    48
  • Homo sapiens dual specificity phosphatase 1 (DUSP1), mRNA
  • Dual specificity phosphatase 1
  • Hypothetical protein LOC100129026
    		• 1843
    		NM_004417   171695  
    710943  
    		   5q34
    5q34    		 26
    49
  • Homo sapiens prohibitin 2 (PHB2), mRNA
  • Prohibitin 2
    		• 11331
    		NM_007273   504620  
    		   12p13 26
    50
  • Homo sapiens spastic paraplegia 20 (Troyer syndrome) (SPG20), mRNA
  • Spastic paraplegia 20 (Troyer syndrome)
    		• 23111
    		NM_015087   440414  
    		   13q13.3 26
    51
  • Homo sapiens male-specific lethal-1 homolog (MSL-1), mRNA
  • Male-specific lethal-1 homolog
    		• 339287
    		NM_001012241   532786  
    		   17q21.1 26
    52
  • Homo sapiens actin, gamma 1 (ACTG1), mRNA
  • Actin, gamma 1
    		• 71
    		NM_001614   514581  
    		   17q25 26
    53
  • Homo sapiens ribosomal protein L13a (RPL13A), mRNA
  • Ribosomal protein L13a
  • Similar to 23 kD highly basic protein
    		• 23521
    		NM_012423   523185  
    645344  
    		   19q13.3
    10q24.1    		 25
    54
  • Homo sapiens GNAS complex locus (GNAS), transcript variant 1, mRNA
  • GNAS complex locus
    		• 2778
    		NM_000516   125898  
    		   20q13.3 25
    55
  • Homo sapiens ribosomal protein L9 (RPL9), transcript variant 1, mRNA
  • Ribosomal protein L9
    		• 6133
    		NM_000661   412370  
    		   4p13 25
    56
  • Homo sapiens phytanoyl-CoA 2-hydroxylase interacting protein-like (PHYHIPL), mRNA
  • Phytanoyl-CoA 2-hydroxylase interacting protein-like
  • Family with sequence similarity 13, member C1
    		• 84457
    		NM_032439   499704  
    607594  
    		   10q11
    10q21.1    		 25
    57
  • Homo sapiens ADP-ribosylation factor-like 4D (ARL4D), mRNA
  • ADP-ribosylation factor-like 4D
    		• 379
    		NM_001661   183153  
    		   17q12-q21 24
    58
  • Homo sapiens secreted protein, acidic, cysteine-rich (osteonectin) (SPARC), mRNA
  • Secreted protein, acidic, cysteine-rich (osteonectin)
    		• 6678
    		NM_003118   111779  
    		   5q31.3-q32 24
    59
  • Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 4 (ABCA4), mRNA
  • ATP-binding cassette, sub-family A (ABC1), member 4
    		• 24
    		NM_000350   416707  
    		   1p22.1-p21 24
    60
  • full-length cDNA clone CS0DC024YI18 of Neuroblastoma Cot 25-normalized of Homo sapiens (human)
  • Methyl-CpG binding domain protein 1
  • Potassium voltage-gated channel, shaker-related subfamily, beta member 2
  • DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)
    		•   CR592084   405610 [**] 
    440497  
    533222 [**] 
    		   18q21
    1p36.3
    5q11-q14    		 24
    61
  • Homo sapiens myosin regulatory light chain MRLC2 (MRLC2), mRNA
  • Myosin regulatory light chain MRLC2
    		• 103910
    		NM_033546   464472  
    		   18p11.31 23
    62
  • Homo sapiens amyloid beta (A4) precursor-like protein 2 (APLP2), mRNA
  • Amyloid beta (A4) precursor-like protein 2
    		• 334
    		NM_001642   709184  
    		     23
    63
  • Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 (DDX17), transcript variant 3, mRNA
  • DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
    		• 10521
    		NM_001098504   528305  
    		   22q13.1 23
    64
  • Homo sapiens retinal outer segment membrane protein 1 (ROM1), mRNA
  • Retinal outer segment membrane protein 1
    		• 6094
    		NM_000327   281564  
    		   11q13 22
    65
  • Homo sapiens spectrin, beta, non-erythrocytic 1 (SPTBN1), transcript variant 1, mRNA
  • Spectrin, beta, non-erythrocytic 1
    		• 6711
    		NM_003128   503178  
    		   2p21 22
    66
  • Homo sapiens reticulon 4 (RTN4), transcript variant 3, mRNA
  • Reticulon 4
    		• 57142
    		NM_007008   637850  
    		   2 22
    67
  • Homo sapiens damage-specific DNA binding protein 1, 127kDa (DDB1), mRNA
  • Damage-specific DNA binding protein 1, 127kDa
    		• 1642
    		NM_001923   290758  
    		   11q12-q13 22
    68
  • Homo sapiens ribosomal protein S11 (RPS11), mRNA
  • Ribosomal protein S11
    		• 6205
    		NM_001015   433529  
    		   19q13.3 22
    69
  • Homo sapiens phosphatidylinositol transfer protein, cytoplasmic 1 (PITPNC1), transcript variant 1, mRNA
  • Phosphatidylinositol transfer protein, cytoplasmic 1
  • Phosphatidylinositol transfer protein, cytoplasmic 1
    		• 26207
    		NM_012417   591185  
    696160  
    		   17q24.2
    17q24.2    		 22
    70
  • Homo sapiens frizzled-related protein (FRZB), mRNA
  • Frizzled-related protein
    		• 2487
    		NM_001463   128453  
    		   2qter 22
    71
  • Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 1 (DNAJB1), mRNA
  • DnaJ (Hsp40) homolog, subfamily B, member 1
    		• 3337
    		NM_006145   515210  
    		   19p13.2 21
    72
  • Homo sapiens solute carrier family 12, (potassium-chloride transporter) member 5 (SLC12A5), mRNA
  • Solute carrier family 12, (potassium-chloride transporter) member 5
    		• 57468
    		NM_020708   21413  
    		   20q13.12 21
    73
  • Homo sapiens guanylate cyclase activator 1B (retina) (GUCA1B), mRNA
  • Guanylate cyclase activator 1B (retina)
    		• 2979
    		NM_002098   446529  
    		   6p21.1 21
    74
  • Homo sapiens ribosomal protein S20 (RPS20), mRNA
  • Ribosomal protein S20
    		• 6224
    		NM_001023   8102  
    		   8q12 21
    75
  • Homo sapiens prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy) (PSAP), transcript variant 2, mRNA
  • Prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy)
    		• 5660
    		NM_001042465   523004  
    		   10q21-q22 21
    76
  • Homo sapiens adaptor-related protein complex 2, mu 1 subunit (AP2M1), transcript variant 2, mRNA
  • Adaptor-related protein complex 2, mu 1 subunit
    		• 1173
    		NM_001025205   518460  
    		   3q28 21
    77
  • Homo sapiens basic helix-loop-helix domain containing, class B, 3 (BHLHB3), mRNA
  • Basic helix-loop-helix domain containing, class B, 3
    		• 79365
    		NM_030762   177841  
    		   12p11.23-p12.1 21
    78
  • Homo sapiens iduronate 2-sulfatase (Hunter syndrome) (IDS), transcript variant 1, mRNA
  • Iduronate 2-sulfatase (Hunter syndrome)
    		• 3423
    		NM_000202   460960  
    		   Xq28 21
    79
  • Homo sapiens microtubule-associated protein tau (MAPT), transcript variant 2, mRNA
  • Microtubule-associated protein tau
    		• 4137
    		NM_005910   101174  
    		   17q21.1 20
    80
  • Homo sapiens trafficking protein, kinesin binding 1 (TRAK1), transcript variant 1, mRNA
  • Trafficking protein, kinesin binding 1
    		• 22906
    		NM_001042646   535711  
    		   3p25.3-p24.1 20
    81
  • Homo sapiens microtubule-associated protein 1B (MAP1B), mRNA
  • Microtubule-associated protein 1B
    		• 4131
    		NM_005909   637017  
    		   5q13 20
    82
  • Homo sapiens aryl hydrocarbon receptor interacting protein-like 1 (AIPL1), transcript variant 2, mRNA
  • Aryl hydrocarbon receptor interacting protein-like 1
    		• 23746
    		NM_001033054   279887  
    		   17p13.1 20
    83
  • Homo sapiens testis enhanced gene transcript (BAX inhibitor 1) (TEGT), transcript variant 2, mRNA
  • Testis enhanced gene transcript (BAX inhibitor 1)
    		• 7009
    		NM_001098576   708025  
    		     20
    84
  • Homo sapiens matrix-remodelling associated 7 (MXRA7), transcript variant 2, mRNA
  • Matrix-remodelling associated 7
    		• 439921
    		NM_001008529   250723  
    		   17q25.1-q25.2 20
    85
  • Homo sapiens ankylosis, progressive homolog (mouse) (ANKH), mRNA
  • Ankylosis, progressive homolog (mouse)
    		• 56172
    		NM_054027   156727  
    		   5p15.1 20
    86
  • Homo sapiens chromosome 7 open reading frame 20 (C7orf20), mRNA
  • Chromosome 7 open reading frame 20
    		• 51608
    		NM_015949   107387 [**] 
    		   7p22.3 20
    87
  • Homo sapiens adducin 3 (gamma) (ADD3), transcript variant 3, mRNA
  • Adducin 3 (gamma)
    		• 120
    		NM_001121   501012  
    		   10q24.2-q24.3 20
    88
  • Homo sapiens glucosidase, alpha; neutral AB (GANAB), transcript variant 2, mRNA
  • Glucosidase, alpha; neutral AB
    		• 23193
    		NM_198334   595071  
    		   11q12.3 20
    89
  • Homo sapiens serpin peptidase inhibitor, clade G (C1 inhibitor), member 1, (angioedema, hereditary) (SERPING1), transcript variant 1, mRNA
  • Serpin peptidase inhibitor, clade G (C1 inhibitor), member 1, (angioedema, hereditary)
    		• 710
    		NM_000062   384598  
    		   11q12-q13.1 20
    90
  • Homo sapiens heat shock 70kDa protein 8 (HSPA8), transcript variant 1, mRNA
  • Heat shock 70kDa protein 8
    		• 3312
    		NM_006597   702021  
    		   11q24.1 20
    91
  • Homo sapiens SH3-domain GRB2-like (endophilin) interacting protein 1 (SGIP1), mRNA
  • SH3-domain GRB2-like (endophilin) interacting protein 1
    		• 84251
    		NM_032291   132121  
    		   1p31.3 20
    92
  • Homo sapiens papillary renal cell carcinoma (translocation-associated) (PRCC), transcript variant 1, mRNA
  • Papillary renal cell carcinoma (translocation-associated)
    		• 5546
    		NM_005973   516948  
    		   1q21.1 20
    93
  • Homo sapiens calmodulin regulated spectrin-associated protein 1 (CAMSAP1), mRNA
  • Calmodulin regulated spectrin-associated protein 1
    		• 157922
    		NM_015447   522493  
    		   9q34.3 20
    94
  • Homo sapiens 2',3'-cyclic nucleotide 3' phosphodiesterase (CNP), mRNA
  • 2',3'-cyclic nucleotide 3' phosphodiesterase
  • DnaJ (Hsp40) homolog, subfamily C, member 7
    		• 1267
    		NM_033133   273621  
    500156 [**] 
    		   17q21
    17q11.2    		 20
    95
  • Homo sapiens mitochondrial ribosomal protein L9 (MRPL9), nuclear gene encoding mitochondrial protein, mRNA
  • Mitochondrial ribosomal protein L9
    		• 65005
    		NM_031420   288936  
    		   1q21.3 19
    96
  • Homo sapiens hGluT-1 mRNA for glutamate transporter, complete cds
  • Solute carrier family 1 (glial high affinity glutamate transporter), member 3
    		• 6507
    		D26443   481918  
    		   5p13 19
    97
  • Homo sapiens ribosomal protein S4, X-linked (RPS4X), mRNA
  • Ribosomal protein S4, X-linked
    		• 6191
    		NM_001007   118076  
    		   X 19
    98
  • Homo sapiens vimentin (VIM), mRNA
  • Vimentin
    		• 7431
    		NM_003380   642813  
    		   10p13 19
    99
  • Homo sapiens ribosomal protein L15 (RPL15), mRNA
  • Ribosomal protein L15
  • Similar to ribosomal protein L15
    		• 6138
    		NM_002948   381219  
    630818  
    		   3p24.2
    4p12    		 19
    100
  • Homo sapiens high-mobility group nucleosome binding domain 1 (HMGN1), mRNA
  • High-mobility group nucleosome binding domain 1
    		• 3150
    		NM_004965   356285  
    		   21q22.3|21q22.2 19


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