NbLib0130: dbEST guinea pig whole eye unnormalized (cpeye02)

Last GRIST date: 12/02/2008

Related Publication: A comparative gene expression profile of the whole eye from human, mouse, and guinea pig. Xiangtian Zhou, Weiwei Wang, Fan Lu, Songnian Hu, Liqin Jiang, Dongsheng Yan, Xiaowei Zhang, Xiaomin Yu, Jun Yu,Jia Qu. Mol Vis. 2007. 13:2214-2221. View Publication

View this library: Full List | Indexed by Chromosome | Indexed by GO Term | Tab Delimited Understanding NEIBank Data
[**] This UniGene associated with another RefSeq or GenBank in this table. Click to display. View All Data | << Previous Page | Next Page >>
Group#Description Entrez Gene IdGenBankUniGene (Build Mm #175) Chromosomal Pos. (BLAT)ChromosomeNum. Clones
1
  • Cavia porcellus complete mitochondrial genome
    		• 808628
    808629
    808630
    808631
    808632
    808633
    808634
    808635
    808636
    808637
    808638
    808639
    808640
    		AJ222767         680
    2
  • Cavia porcellus rhodopsin (Rho) mRNA, complete cds
    		•   EF457995         203
    3
  • Cavia porcellus betaB2-crystallin (Crybb2) mRNA, complete cds
    		•   EF457998         145
    4
  • Cavia porcellus gammaS-crystallin (Crygs) mRNA, complete cds
    		•   DQ903939         103
    5
  • Cavia porcellus gammaB-crystallin (Crygb) mRNA, complete cds
    		•   EF426307         82
    6
  • Cavia porcellus S-antigen (Sag) mRNA, complete cds
    		•   EF457996         70
    7
  • C.porcellus zeta-crystallin mRNA, complete cds
    		•   M26936         68
    8
  • Cavia porcellus alpha-transducin (Gnat1) mRNA, complete cds
    		•   EU257502         63
    9
  • Rattus norvegicus aldolase C (Aldoc), mRNA
    		• 24191
    		NM_012497         60
    10
  • Cavia porcellus alphaB-crystallin (Cryab) mRNA, complete cds
    		•   EU252027         53
    11
  • PREDICTED: Macaca mulatta similar to adaptor-related protein complex 2, mu 1 subunit, transcript variant 11 (LOC703554), mRNA
    		• 703554
    		XM_001102601         52
    12
  • Cavia porcellus mRNA for glyceraldehyde 3-phosphate dehydrogenase, partial cds
    		•   AB060340         50
    13
  • Similar to EST: EB363307
    		•   EB363307         47
    14
  • Cavia porcellus betaA4-crystallin (Cryba4) mRNA, complete cds
    		•   EF666994         43
    15
  • PREDICTED: Pan troglodytes similar to eukaryotic translation elongation factor 1 alpha 1 (LOC747429), partial mRNA
    		• 747429
    		XM_001156967         41
    16
  • Cavia porcellus mRNA for beta A3-crystallin and beta A1-crystallin
    		•   AJ306650         40
    17
  • Cavia porcellus betaB3-crystallin (Crybb3) mRNA, complete cds
    		•   EF457997         35
    18
  • apoD=RNA type 38 [guinea pigs, adrenal gland, mRNA, 994 nt]
    		•   S79402         34
    19
  • Cavia porcellus ferritin light chain mRNA, complete cds
    		•   AF233445         33
    20
  • Cavia porcellus cGMP-phosphodiesterase 6 gamma subunit (cGMP-PDE6 gamma) mRNA, complete cds
    		•   AF132929         31
    21
  • 99% protein similarity to: Ribosomal protein S6 [Homo sapiens] (Similar to EST: EB369872)
    		•   EB369872         26
    22
  • Cavia porcellus mRNA for catalase, complete cds
    		•   AJ005111         25
    23
  • 100% protein similarity to: ribosomal protein P1 isoform 1 [Homo sapiens] (Similar to EST: EB370535)
    		•   EB370535         24
    24
  • 100% protein similarity to: Apolipoprotein E precursor (Apo-E) (Similar to EST: EB368653)
    		•   EB368653         23
    25
  • Cavia porcellus betaA2-crystallin (Cryba2) mRNA, complete cds
    		•   EF666995         22
    26
  • 81% protein similarity to: Clu protein [Rattus norvegicus] (Similar to EST: DT807185)
    		•   DT807185         20
    27
  • 97% protein similarity to: ribosomal protein L13a [Bos taurus]
    		•           20
    28
  • Bos taurus glutamate-ammonia ligase (glutamine synthetase) (GLUL), mRNA
    		• 281199
    		NM_001040474         19
    29
  • PREDICTED: Macaca mulatta similar to thymosin, beta 4 (LOC701399), mRNA
    		• 701399
    		XM_001089690         19
    30
  • 96% protein similarity to: ribosomal protein S18 [Mus musculus]
    		•           19
    31
  • PREDICTED: Macaca mulatta similar to recoverin (LOC717807), mRNA
    		• 717807
    		XM_001113548         18
    32
  • PREDICTED: Canis familiaris similar to glyceraldehyde-3-phosphate dehydrogenase (LOC488411), mRNA
    		• 488411
    		XM_847161         17
    33
  • 100% protein similarity to: Tetraspanin 3 [Homo sapiens] (Similar to EST: EB363746)
    		•   EB363746         17
    34
  • Cavia porcellus beta actin mRNA, complete cds
    		•   AF508792         16
    35
  • 72% protein similarity to: cystatin C [Mus musculus] (Similar to EST: EB366887)
    		•   EB366887         16
    36
  • 94% protein similarity to: guanylate cyclase activator 1a (retina) [Rattus norvegicus] (Similar to EST: EB365518)
    		•   EB365518         16
    37
  • 92% protein similarity to: cathepsin B preproprotein [Rattus norvegicus] (Similar to EST: EB364659)
    		•   EB364659         16
    38
  • Cavia porcellus alpha-enolase (Eno1) mRNA, complete cds
    		•   EU306867         15
    39
  • Cavia porcellus GRIFIN mRNA, complete cds
    		•   EU259197         15
    40
  • PREDICTED: Equus caballus similar to Cdc2l1 protein (LOC100070752), mRNA
    		• 100070752
    		XM_001500420         14
    41
  • Cavia porcellus betaB1-crystallin (Crybb1) mRNA, complete cds
    		•   EF666993         14
    42
  • Similar to EST: EB363136
    		•   EB363136         14
    43
  • PREDICTED: Macaca mulatta similar to H3 histone, family 3B, transcript variant 1 (LOC708054), mRNA
    		• 708054
    		XM_001096496         13
    44
  • 96% protein similarity to: 60S ribosomal protein L6 (Similar to EST: EB371590)
    		•   EB371590         13
    45
  • 97% protein similarity to: ALDH3A1 protein [Homo sapiens] (Similar to EST: EB367065)
    		•   EB367065         13
    46
  • 97% protein similarity to: TALDO1 protein [Homo sapiens] (Similar to EST: EB366150)
    		•   EB366150         13
    47
  • 100% protein similarity to: L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M) (Similar to EST: EB364290)
    		•   EB364290         13
    48
  • 98% protein similarity to: Ig gamma-2 chain C region
    		•           13
    49
  • PREDICTED: Pan troglodytes similar to retinal protein, transcript variant 1 (LOC455028), mRNA
    		• 455028
    		XM_001145774         12
    50
  • Cavia porcellus beta-transducin (Gnb1) mRNA, complete cds
    		•   EU257501         12
    51
  • 100% protein similarity to: cathepsin D preproprotein (predicted) [Callicebus moloch] (Similar to EST: EB364075)
    		•   EB364075         12
    52
  • PREDICTED: Pan troglodytes similar to 17,000 dalton myosin light chain (LOC746313), mRNA
    		• 746313
    		XM_001153433         11
    53
  • PREDICTED: Macaca mulatta similar to Cofilin-1 (Cofilin, non-muscle isoform) (18 kDa phosphoprotein) (p18) (LOC721882), mRNA
    		• 721882
    		XM_001118077         11
    54
  • 100% protein similarity to: ribosomal protein L15 [synthetic construct] (Similar to EST: EB372004)
    		•   EB372004         11
    55
  • 100% protein similarity to: ribosomal protein L27a [Mus musculus] (Similar to EST: EB372179)
    		•   EB372179         11
    56
  • 72% protein similarity to: Plasma protease C1 inhibitor precursor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor)
    		•           11
    57
  • 75% protein similarity to: MHC class I antigen [Saimiri sciureus sciureus]
    		•           11
    58
  • Unidentified EL935895
    		•           11
    59
  • 100% protein similarity to: ribosomal protein S20 [Solea senegalensis]
    		•           11
    60
  • 100% protein similarity to: Rps16 protein [Mus musculus]
    		•           11
    61
  • transferrin [guinea pigs, liver, mRNA Partial, 159 nt]
    		•   S81301         10
    62
  • Guinea pig mRNA for lipocortin-like protein 39K
    		•   X14635         10
    63
  • Cavia porcellus major intrinsic protein (MIP) mRNA, complete cds
    		•   EU327787         10
    64
  • Cavia porcellus mitochondrial ATP synthase, H+ transporting F1 complex beta subunit (ATP5B) mRNA, partial cds; nuclear gene for mitochondrial product
    		•   DQ403103         10
    65
  • 100% protein similarity to: Rig homolog [human, brain, Peptide Partial, 135 aa] (Similar to EST: EB371733)
    		•   EB371733         10
    66
  • 85% protein similarity to: opticin [Sus scrofa] (Similar to EST: EB367192)
    		•   EB367192         10
    67
  • 85% protein similarity to: Chain A, Structural And Kinetic Effects Of Hydrophobic Mutations On The Active Site Of Human Carbonic Anhydrase Ii (Similar to EST: EB368784)
    		•   EB368784         10
    68
  • 98% protein similarity to: Chain A, Fructose-1,6-Bisphosphate Aldolase From Rabbit Muscle (Similar to EST: EB367427)
    		•   EB367427         10
    69
  • Unidentified EL935747
    		•           10
    70
  • Unidentified EL935867
    		•           10
    71
  • Sus scrofa mRNA, clone:ITT010012G03, expressed in intestine
    		•   AK231188         9
    72
  • PREDICTED: Canis familiaris similar to MRDS1 (LOC609660), mRNA
    		• 609660
    		XM_846959         9
    73
  • PREDICTED: Macaca mulatta similar to ribosomal protein L31, transcript variant 1 (LOC710744), mRNA
    		• 710744
    		XM_001106496         9
    74
  • Pan troglodytes calmodulin 1 (phosphorylase kinase, delta) (CALM1), mRNA
    		• 738819
    		NM_001110819         9
    75
  • Cavia porcellus TPT1 (TPT1) mRNA, complete cds
    		•   EU330893         9
    76
  • 99% protein similarity to: 60S ribosomal protein L12 [Sus scrofa] (Similar to EST: EB366410)
    		•   EB366410         9
    77
  • 89% protein similarity to: heat shock protein HSP27 (Similar to EST: EB370052)
    		•   EB370052         9
    78
  • 98% protein similarity to: rCG62893 [Rattus norvegicus] (Similar to EST: EB370095)
    		•   EB370095         9
    79
  • 85% protein similarity to: CD74 antigen isoform 1 [Mus musculus]
    		•           9
    80
  • 100% protein similarity to: ribosomal protein L27 [synthetic construct]
    		•           9
    81
  • Unidentified EL936434
    		•           9
    82
  • 92% protein similarity to: Homo sapiens signal sequence receptor, delta (translocon-associated protein delta) [synthetic construct]
    		•           9
    83
  • 100% protein similarity to: ribosomal protein S2 [Bos taurus]
    		•           9
    84
  • Canis lupus familiaris solute carrier family 6 (neurotransmitter transporter, taurine), member 6 (SLC6A6), mRNA
    		• 404000
    		NM_001003311         8
    85
  • Cavia porcellus Carbonic anhydrase 3 (CA3) mRNA, complete cds
    		•   EU327786         8
    86
  • PREDICTED: Macaca mulatta similar to activating transcription factor 4, transcript variant 2 (ATF4), mRNA
    		• 703965
    		XM_001099094         8
    87
  • PREDICTED: Pan troglodytes similar to ribosomal protein, transcript variant 1 (LOC748261), mRNA
    		• 748261
    		XM_001174724         8
    88
  • Cavia porcellus Cu/Zn superoxide dismutase (SOD1) mRNA, partial cds
    		•   AY466105         8
    89
  • 98% protein similarity to: triosephosphate isomerase 1 [Bos taurus] (Similar to EST: EB365169)
    		•   EB365169         8
    90
  • 100% protein similarity to: ribosomal protein L10a [Sus scrofa] (Similar to EST: EB367185)
    		•   EB367185         8
    91
  • 100% protein similarity to: heat shock protein 70B [Alligator mississippiensis] (Similar to EST: EB370890)
    		•   EB370890         8
    92
  • Unidentified EL935774
    		•           8
    93
  • 90% protein similarity to: Matrix Gla protein precursor (MGP)
    		•           8
    94
  • 99% protein similarity to: ribosomal protein S14 [Oncorhynchus masou formosanus]
    		•           8
    95
  • 98% protein similarity to: RTN4 protein [Bos taurus]
    		•           8
    96
  • PREDICTED: Equus caballus hypothetical protein LOC100059881 (LOC100059881), mRNA
    		•   XM_001492315         7
    97
  • Bos taurus poly(rC) binding protein 2 (PCBP2), mRNA
    		• 540653
    		NM_001034711         7
    98
  • Cavia porcellus metalloproteinase inhibitor TIMP-2 mRNA, complete cds
    		•   AF127803         7
    99
  • Cavia porcellus leucine zipper transcription factor (NRL) mRNA, complete cds
    		•   EU477759         7
    100
  • Mus musculus mRNA for myocilin, complete cds
    		• 17926
    		AB013592         7


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