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UGID:908996     UniGene Hs.518249     Homo sapiens (human)   CNBP Order cDNA clone, Links
CCHC-type zinc finger, nucleic acid binding protein (CNBP)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_001120664.1 zinc finger protein 9 isoform 1 H. sapiens 100.0 178
NP_038521.1 cellular nucleic acid binding protein isoform 1 M. musculus 100.0 177
NP_072120.1 CCHC-type zinc finger, nucleic acid binding protein R. norvegicus 100.0 176
XP_849006.1 PREDICTED: similar to cellular nucleic acid binding protein 1 isoform 2 C. lupus familiaris 100.0 176
XP_001488710.1 PREDICTED: similar to CCHC-type zinc finger, nucleic acid binding protein isoform 2 E. caballus 100.0 176
NP_001029396.1 zinc finger protein 9 B. taurus 100.0 169
NP_001084082.1 cellular nucleic acid binding protein X. laevis 97.6 167
XP_001922882.1 PREDICTED: hypothetical protein LOC335839 isoform 1 D. rerio 82.6 160

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
Note: Highly represented in several libraries
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: brain; embryonic tissue; uterus; lung; uncharacterized tissue; intestine; testis; eye; muscle; skin; stomach; liver; kidney; heart; placenta; mixed; pharynx; prostate; ovary; mammary gland; lymph; adrenal gland; tonsil; mouth; cervix; pancreas; bone; ascites; larynx; blood; esophagus; connective tissue; lymph node; vascular; adipose tissue; bone marrow; thyroid; spleen; salivary gland; bladder; umbilical cord; thymus; pituitary gland; ear; amniotic fluid; trachea; nerve; ganglia; spinal cord; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3q21
UniSTS entry: Chr 3 PMC15869P1
UniSTS entry: Chr 3 RH98983
UniSTS entry: Chr 3 SHGC-77307
UniSTS entry: Chr 3 (n/a)
UniSTS entry: Chr 3 D3S2800E
UniSTS entry: Chr 3 A008K17
UniSTS entry: Chr 3 RH47204
UniSTS entry: Chr 3 SHGC-32794
UniSTS entry: Chr Y D8S2279
UniSTS entry: Chr Y D10S16
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (37)

NM_003418.4 Homo sapiens CCHC-type zinc finger, nucleic acid binding protein (CNBP), transcript variant 3, mRNA PA
AY436367.1 Homo sapiens cellular nucleic acid binding protein mRNA, partial cds P
CR626515.1 full-length cDNA clone CS0DA006YN19 of Neuroblastoma of Homo sapiens (human) P
CR625456.1 full-length cDNA clone CS0DN005YJ06 of Adult brain of Homo sapiens (human) P
CR622873.1 full-length cDNA clone CS0DM005YF11 of Fetal liver of Homo sapiens (human) P
CR618662.1 full-length cDNA clone CS0DF020YB18 of Fetal brain of Homo sapiens (human) P
CR616385.1 full-length cDNA clone CL0BA005ZA06 of Placenta of Homo sapiens (human) P
CR615983.1 full-length cDNA clone CS0DF034YO13 of Fetal brain of Homo sapiens (human) P
CR614312.1 full-length cDNA clone CS0DM012YC13 of Fetal liver of Homo sapiens (human) P
CR610184.1 full-length cDNA clone CS0DM006YA18 of Fetal liver of Homo sapiens (human) P
CR608775.1 full-length cDNA clone CS0DI016YM06 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR608484.1 full-length cDNA clone CS0DJ002YH09 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) P
CR606309.1 full-length cDNA clone CL0BB018ZC06 of Neuroblastoma of Homo sapiens (human) P
CR602369.1 full-length cDNA clone CS0DF036YA11 of Fetal brain of Homo sapiens (human)
CR599232.1 full-length cDNA clone CS0DN004YH09 of Adult brain of Homo sapiens (human) P
CR597317.1 full-length cDNA clone CS0DE005YP21 of Placenta of Homo sapiens (human) P
CR596443.1 full-length cDNA clone CS0DI027YM10 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR594065.1 full-length cDNA clone CS0DF001YC09 of Fetal brain of Homo sapiens (human) P
CR592970.1 full-length cDNA clone CL0BB005ZA06 of Neuroblastoma of Homo sapiens (human) P
BT019613.1 Homo sapiens zinc finger protein 9 (a cellular retroviral nucleic acid binding protein) mRNA, complete cds P
BC093058.1 Homo sapiens CCHC-type zinc finger, nucleic acid binding protein, mRNA (cDNA clone MGC:111143 IMAGE:30721134), complete cds PA
DQ092367.1 Homo sapiens cellular nucleic acid binding protein beta variant 2 (ZNF9) mRNA, complete cds, alternatively spliced P
DQ092366.1 Homo sapiens cellular nucleic acid binding protein beta variant 1 (ZNF9) mRNA, complete cds, alternatively spliced P
DQ091187.1 Homo sapiens cellular nucleic acid binding protein alpha variant 1 (CNBP) mRNA, complete cds, alternatively spliced P
AK021693.1 Homo sapiens cDNA FLJ11631 fis, clone HEMBA1004267 A
BC000288.2 Homo sapiens CCHC-type zinc finger, nucleic acid binding protein, mRNA (cDNA clone MGC:8324 IMAGE:2819226), complete cds PA
M28372.1 Homo sapiens sterol regulatory element-binding protein (CNBP) mRNA, complete cds P
BC014911.1 Homo sapiens CCHC-type zinc finger, nucleic acid binding protein, mRNA (cDNA clone MGC:17190 IMAGE:3906502), complete cds PA
AK054592.1 Homo sapiens cDNA FLJ30030 fis, clone 3NB692001339, highly similar to CELLULAR NUCLEIC ACID BINDING PROTEIN P
AK292119.1 Homo sapiens cDNA FLJ77718 complete cds P
AK314380.1 Homo sapiens cDNA, FLJ95153, Homo sapiens zinc finger protein 9 (a cellular retroviral nucleicacid binding protein) (ZNF9), mRNA P
NM_001127196.1 Homo sapiens CCHC-type zinc finger, nucleic acid binding protein (CNBP), transcript variant 6, mRNA PA
NM_001127195.1 Homo sapiens CCHC-type zinc finger, nucleic acid binding protein (CNBP), transcript variant 5, mRNA PA
NM_001127194.1 Homo sapiens CCHC-type zinc finger, nucleic acid binding protein (CNBP), transcript variant 4, mRNA PA
NM_001127193.1 Homo sapiens CCHC-type zinc finger, nucleic acid binding protein (CNBP), transcript variant 2, mRNA PA
NM_001127192.1 Homo sapiens CCHC-type zinc finger, nucleic acid binding protein (CNBP), transcript variant 1, mRNA PA
AK298154.1 Homo sapiens cDNA FLJ61146 complete cds, highly similar to Cellular nucleic acid-binding protein PA

EST sequences (10 of 1702) [Show all sequences]

AA970794.1 Clone IMAGE:1581085 mixed 3' read A
AI000174.1 Clone IMAGE:1608314 mammary gland 3' read
AA928087.1 Clone IMAGE:1563537 mixed 3' read A
AA946970.1 Clone IMAGE:1589278 kidney 3' read A
AI074492.1 Clone IMAGE:1670109 brain 3' read A
AA903805.1 Clone IMAGE:1518004 uncharacterized tissue 3' read A
AI083509.1 Clone IMAGE:1662146 mixed 3' read A
CB045249.1 Clone IMAGE:3218294 intestine 5' read P
CB051059.1 Clone IMAGE:3289576 prostate 5' read
AI150964.1 Clone IMAGE:1704911 heart 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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