Name: |
ESPript |
Version(s): |
1.99
|
Category: |
Molecular Visualization; Alignment, Sequence Analysis, Bioinformatics |
Author(s)/Vendor(s): |
Patrice Gouet and Frédéric Metoz
|
Program Description: |
ESPript generates a PostScript file of aligned sequences with
graphical enhancements. Its main input is an ascii file of
pre-aligned sequences. Optional files allow further rendering. The
program calculates a similarity score for each residue of the
aligned sequences.
The output shows:
Secondary Structures
Aligned sequences
Similarities
Consensus
Accessibility
Hydropathy
User-supplied markers
Intermolecular contacts
In addition, similarity score can be written in the bfactor column
of a pdb file, to enable direct display of highly conserved areas.
|
Computer platform(s): |
SGI
|
Location: |
/usr/local/fbscapp/ESPript/
|
Access: |
set path = ($path /usr/local/fbscapp/ESPript/bin)
ESPript
|
Documentation: |
Available in the html format. Point a web browser on
your SGI system to:
file:/usr/local/fbscapp/ESPript/index.html
|
Web Site: |
http://prodes.toulouse.inra.fr/ESPript/
|
ABCC Contact Person: |
|
Created By: |
miaskiew
|
Created Time: |
2001-11-20 |
Updated By: |
|
Updated Time: |
|