ProteinProspectorv 3.2.1Tools for mining sequence databases
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Administrative Resources | ProteinProspector Tools | ||||||||||
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Instructions
         
Administering ProteinProspector
Known Bugs          Current Bug Listing - UCSF          Bug Listing - Local Copy                     (known at release of this version) ProteinProspector Revision HistoryProteinProspector Automation Guidance
Useful Tables |
Sequence Database Search Programs
MS-Tag ( search with fragment-ion tag data from MS/MS ) MS-Seq ( search with sequence tag data from MS/MS ) MS-Edman ( search with Edman microsequence / peptide MS data) Peptide / Protein MS Utility Programs
MS-Product ( fragment ion masses for peptide ) MS-Comp ( AA compositions fitting parent or fragment mass and immonium ions ) MS-Isotope ( isotope patterns of peptides and organic molecules ) FASTA Database Manipulation/Information ToolsFor questions/comments send email to: prbaker@itsa.ucsf.edu |
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Credits:
These programs were developed by
Karl Clauser and
Peter Baker in the
UCSF Mass Spectrometry Facility. The Facility is directed by Dr. Alma Burlingame, a professor in the Department of Pharmaceutical Chemistry at UCSF. |