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ABCC : CGI Generator for miRNA
CGI Generator for miRNA
Program Algorithm Selection
Choose an algorithm:    
targetscan
miranda
Input Sequence/Identifier Area
Please Enter a Sequence ID:
   
OR Paste a Sequence(fasta format):
OR Choose a Sequence File:
   
OR Upload a Server Sequence File:
   
miRNA library selection
Choose a library:    
all
aga
ame
ath
cbr
cel
cfa
dme
dps
dre
ebv
gga
hcv
hsa
khv
mhv
mmu
osa
rno
sbi
xla
zma
Run Specifics
EMail Address:
   
Bioinformatics
Test Applications
Special Test Applications
-
FormTestApp
-
NR_TestApp
Annotation
BLAST Server
-
Blast
-
Blast2Seqs
-
Megablast
-
PSIBlast
SSaha Server
-
SsahaNuc
Blat Server
-
Blat
Genome Mapping
-
GMap
Repeat Finders
-
Repeatmasker
-
StrFinder
Gene Finders
-
GenScan
GeneWise
-
Wise2
Genome Primer Scan
-
Search
Primer design
-
Primer0.5
-
RefPrimer
-
Primer3
Alignment and Comparison
Cross-match server
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Cross
-
Screen
-
Swat
Alignment Server
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Clustalw
-
T-COFFEE
-
Clustal_W
-
ClustalX
-
ESPript
-
Jalview
SNP tools
-
Snpinfo
RNA Analysis
-
EdScan
-
EFFold
-
SegFold
-
SigStb
-
RNAGA
-
RNAfold
-
CorreLogo
-
KNetFold
-
COVE
-
PKNOTS
-
ViennaRNA
-
RNAjunction
miRNA Analysis
-
miRNA
Protein Analysis
-
Dipro2.0
-
TMHMM
-
ASSP
-
Core-find
-
SeqSpace
-
SIGNALP
Phylogenetic Analysis
-
PAUP
-
LARD
-
PHYLIP
-
Topal
-
Modeltest
Utilities
-
GetSequence
-
Chopper
-
GetDoubleDNA
-
Readseq
-
Frag_pI
-
reverseSeq
-
pI_plot
Application Suites
-
Pipeline
-
Seqweb
-
EMBOSS
-
GCG
-
bmdk9
Molecular Modeling(1)
-
3D-Dock
-
3DNA
-
Amber
-
AMIGOS
-
ANALYZE
-
AutDockTools
-
AutoDock
-
Open_Babel
-
CACTVS
-
CHARMM
-
ConsInspector
-
Curves
-
DGeom95
-
DINO
-
DOCK
-
DSSP
-
GRASP
Molecular Modeling(2)
-
Gromacs
-
cerius2
-
quanta
-
catalyst
-
Hint
-
insightII
-
MDDisplay
-
MidasPlus
-
MOIL-View
-
MSP
-
O
-
PBCAID
-
SWISS-MODEL
-
SYBYL
-
ViennaRNA
-
VMD
-
WHAT_CHECK
-
CambridgeDB
-
CAP_2002_DbSearch
Molecular Visualization(1)
-
3DNA
-
Amber
-
AutDockTools
-
Drawna
-
ESPript
-
gOpenMol
-
GRASP
-
Gromacs
-
insightII
-
LIGPLOT
-
MDDisplay
-
MidasPlus
Molecular Visualization(2)
-
MOIL-View
-
MOLEKEL
-
MOLMOL
-
Molscript
-
MSP
-
O
-
PBCAID
-
PREPI
-
rasmol
-
Raster3D
-
SWISS-MODEL
-
SYBYL
-
VMD
-
XMakemol
Quantum Chemistry
-
AMSOL
-
GAMESS
-
Gaussian
-
insightII
-
Jaguar
-
MOLEKEL
XRay/NMR Structure Refinement
-
Amber
-
AMoRe
-
ANALYZE
-
ARP/wARP
-
CCP4
-
DINO
-
O
-
TNT
-
WHAT_CHECK
-
XtalView
-
CCP4i
Other
-
AutoDock
-
insightII
-
MATLAB
-
procheck
-
CCP4i
-
CambridgeDB
-
R-Project