Name: |
Modeltest |
Version(s): |
3.6 |
Category: |
Phylogenetic Analysis, Bioinformatics |
Author(s)/Vendor(s): |
David Posada
dposada@uvigo.es
|
Program Description: |
MODELTEST is program for the selection the model of nucleotide substitution that
best fits the data. Currently, the program chooses among 56 models, and
calculates AIC values, AIC differences and Akaike weights and hierarchical
likelihood ratio tests. This version includes implements assesment of model
uncertainty and tools for model averaging using the AIC. A new addition is the
calculation of model averaged estimates and parameter importances. Note that it
has been observed that this hLRT implementation can get trapped in local
optima. Check your results. |
Computer platform(s): |
SGI Irix
Linux-32bit
Linux-64bit (SGI Altix) |
Location: |
/usr/local/fbscapp/Modeltest3.6 |
Access: |
Account at ABCC is required to use Modeltest.
To use the program, add /usr/local/fbscapp/Modeltest3.6/bin to your path. Then call the program as:
modeltest
|
Documentation: |
In the PDF format:
/usr/local/fbscapp/Modeltest3.6/doc/Modeltest3.6.pdf
|
Web Site: |
http://darwin.uvigo.es/ |
ABCC Contact Person: |
Bob Stephens
bobs@ncifcrf.gov
|
Created By: |
miaskiew |
Created Time: |
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Updated By: |
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Updated Time: |
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