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ABCC : CGI Generator for Blast2Seqs
CGI Generator for Blast2Seqs
Input Sequence1 ID/Sequence Area
Enter a Sequence ID:
   
OR Paste a Sequence:
OR Choose a Sequence File:
   
OR Choose a Server Sequence File:
   
Input Sequence2 ID/Sequence Area
Enter a Sequence ID:
   
OR Paste a Sequence:
OR Choose a Sequence File:
   
OR Choose a Server Sequence File:
   
Program Selection Area
Program Selection:    
blastn
blastp
blastx
tblastn
tblastx
Run Specifics
Email Address:
   
Check to set parameters:    
Blast2Seqs Parameters
Bioinformatics
Test Applications
Special Test Applications
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FormTestApp
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NR_TestApp
Annotation
BLAST Server
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Blast
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Blast2Seqs
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Megablast
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PSIBlast
SSaha Server
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SsahaNuc
Blat Server
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Blat
Genome Mapping
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GMap
Repeat Finders
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Repeatmasker
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StrFinder
Gene Finders
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GenScan
GeneWise
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Wise2
Genome Primer Scan
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Search
Primer design
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Primer0.5
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RefPrimer
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Primer3
Alignment and Comparison
Cross-match server
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Cross
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Screen
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Swat
Alignment Server
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Clustalw
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T-COFFEE
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Clustal_W
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ClustalX
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ESPript
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Jalview
SNP tools
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Snpinfo
RNA Analysis
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EdScan
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EFFold
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SegFold
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SigStb
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RNAGA
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RNAfold
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CorreLogo
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KNetFold
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COVE
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PKNOTS
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ViennaRNA
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RNAjunction
miRNA Analysis
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miRNA
Protein Analysis
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Dipro2.0
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TMHMM
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ASSP
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Core-find
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SeqSpace
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SIGNALP
Phylogenetic Analysis
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PAUP
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LARD
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PHYLIP
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Topal
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Modeltest
Utilities
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GetSequence
-
Chopper
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GetDoubleDNA
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Readseq
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Frag_pI
-
reverseSeq
-
pI_plot
Application Suites
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Pipeline
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Seqweb
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EMBOSS
-
GCG
-
bmdk9
Molecular Modeling(1)
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3D-Dock
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3DNA
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Amber
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AMIGOS
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ANALYZE
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AutDockTools
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AutoDock
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Open_Babel
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CACTVS
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CHARMM
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ConsInspector
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Curves
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DGeom95
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DINO
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DOCK
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DSSP
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GRASP
Molecular Modeling(2)
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Gromacs
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cerius2
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quanta
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catalyst
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Hint
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insightII
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MDDisplay
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MidasPlus
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MOIL-View
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MSP
-
O
-
PBCAID
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SWISS-MODEL
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SYBYL
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ViennaRNA
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VMD
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WHAT_CHECK
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CambridgeDB
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CAP_2002_DbSearch
Molecular Visualization(1)
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3DNA
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Amber
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AutDockTools
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Drawna
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ESPript
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gOpenMol
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GRASP
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Gromacs
-
insightII
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LIGPLOT
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MDDisplay
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MidasPlus
Molecular Visualization(2)
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MOIL-View
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MOLEKEL
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MOLMOL
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Molscript
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MSP
-
O
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PBCAID
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PREPI
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rasmol
-
Raster3D
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SWISS-MODEL
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SYBYL
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VMD
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XMakemol
Quantum Chemistry
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AMSOL
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GAMESS
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Gaussian
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insightII
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Jaguar
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MOLEKEL
XRay/NMR Structure Refinement
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Amber
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AMoRe
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ANALYZE
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ARP/wARP
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CCP4
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DINO
-
O
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TNT
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WHAT_CHECK
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XtalView
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CCP4i
Other
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AutoDock
-
insightII
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MATLAB
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procheck
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CCP4i
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CambridgeDB
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R-Project